FC921980

Overview
NameFC921980
Unique NameFC921980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2802 contig Csv1_Contig2802:641..1221. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921980 vs. ExPASy Swiss-Prot
Match: SUT31_ARATH (Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 6.666e-76
Identity = 139/181 (76.80%), Postives = 165/181 (91.16%), Query Frame = 2
Query:    2 LKKGLNPPSFSDLVFVSPYLTTAIKTGIITGVIAMAEPVAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMSMAVMVTLLFLTPLFHYTPLVVLSAIIMAAMLGLIDYEAVIHLFKVDKFYFIECVVAHIGVGFVSIQIVLDIAISISVRR 544
            LKKGLNP S SDL+F SPY++TA+KTG+ITG+IA+AE VAVGRSFAMFKNY+IDGNKEMIAFGMMNI GS TSCYLTTGPFSRSAVN+NAGCKTA+SNIVM++AVM TLLFLTPLFHYTPLVVLSAII++AMLGLIDY+A IHL+KVDKF F+ C+ A++GV F S++I L +A++IS+ R
Sbjct:  306 LKKGLNPLSGSDLIFTSPYMSTAVKTGLITGIIALAEGVAVGRSFAMFKNYNIDGNKEMIAFGMMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAMSNIVMAIAVMFTLLFLTPLFHYTPLVVLSAIIISAMLGLIDYQAAIHLWKVDKFDFLVCMSAYVGVVFGSVEIGLVVAVAISIAR 486          
BLAST of FC921980 vs. ExPASy Swiss-Prot
Match: SUT32_ARATH (Sulfate transporter 3.2 OS=Arabidopsis thaliana GN=SULTR3;2 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.101e-70
Identity = 131/181 (72.38%), Postives = 158/181 (87.29%), Query Frame = 2
Query:    2 LKKGLNPPSFSDLVFVSPYLTTAIKTGIITGVIAMAEPVAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMSMAVMVTLLFLTPLFHYTPLVVLSAIIMAAMLGLIDYEAVIHLFKVDKFYFIECVVAHIGVGFVSIQIVLDIAISISVRR 544
            LKKG+NPPS + LVF  PY+  A+K GIITGVIA+AE +AVGRSFAM+KNY+IDGNKEMIAFGMMNI GS +SCYLTTGPFSRSAVN+NAGCKTA+SN+VM++AV VTLLFLTPLF YTPLVVLS+II+AAMLGL+DYEA IHL+K+DKF F  C+ A++GV F +I+I L +++ ISV R
Sbjct:  297 LKKGINPPSITHLVFTPPYVMLALKVGIITGVIALAEGIAVGRSFAMYKNYNIDGNKEMIAFGMMNILGSFSSCYLTTGPFSRSAVNYNAGCKTALSNVVMAVAVAVTLLFLTPLFFYTPLVVLSSIIIAAMLGLVDYEAAIHLWKLDKFDFFVCLSAYLGVVFGTIEIGLILSVGISVMR 477          
BLAST of FC921980 vs. ExPASy Swiss-Prot
Match: SUT34_ARATH (Probable sulfate transporter 3.4 OS=Arabidopsis thaliana GN=SULTR3;4 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.302e-60
Identity = 113/179 (63.13%), Postives = 144/179 (80.45%), Query Frame = 2
Query:    2 LKKGLNPPSFSDLVFVSPYLTTAIKTGIITGVIAMAEPVAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMSMAVMVTLLFLTPLFHYTPLVVLSAIIMAAMLGLIDYEAVIHLFKVDKFYFIECVVAHIGVGFVSIQIVLDIAISISV 538
            L KGLNPPS + L F   +L  AIKTGIITG++++ E +AVGR+FA  KNY ++GNKEM+A G MN+AGSCTSCY+TTG FSRSAVN+NAG KTAVSNIVM+ AV+VTLLFL PLF+YTP V+L+AII+ A++GLIDY+A   L+KVDKF F  C+ +  GV FVS+ + L IA+++SV
Sbjct:  313 LPKGLNPPSLNMLYFSGAHLALAIKTGIITGILSLTEGIAVGRTFASLKNYQVNGNKEMMAIGFMNMAGSCTSCYVTTGSFSRSAVNYNAGAKTAVSNIVMASAVLVTLLFLMPLFYYTPNVILAAIILTAVIGLIDYQAAYKLWKVDKFDFFTCLCSFFGVLFVSVPLGLAIAVAVSV 491          
BLAST of FC921980 vs. ExPASy Swiss-Prot
Match: SUT35_ARATH (Probable sulfate transporter 3.5 OS=Arabidopsis thaliana GN=SULTR3;5 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 1.949e-59
Identity = 115/184 (62.50%), Postives = 141/184 (76.63%), Query Frame = 2
Query:    2 LKKGLNPPSFSDLVFVSPYLTTAIKTGIITGVIAMAEPVAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMSMAVMVTLLFLTPLFHYTPLVVLSAIIMAAMLGLIDYEAVIHLFKVDKFYFIECVVAHIGVGFVSIQIVLDIAISISVRRGHL 553
            LKKGLNPPS   L F S YL    K GI+TG+IA+AE +A+GRSFA+ KN   DGNKEMIAFG+MN+ GS TSCYLTTGPFS++AVN+NAG KT +SN+VM + +M+ LLFL PLF YTPLV LSAIIM+AMLGLI+YE + HLFKVDKF F+ C+ A  GV F+S+   L I++  S+ R  L
Sbjct:  301 LKKGLNPPSIQLLNFDSKYLGMVFKAGIVTGLIALAEGIAIGRSFAVMKNEQTDGNKEMIAFGLMNVIGSFTSCYLTTGPFSKTAVNYNAGTKTPMSNVVMGVCMMLVLLFLAPLFSYTPLVGLSAIIMSAMLGLINYEEMYHLFKVDKFDFLVCMSAFFGVSFLSMDYGLIISVGFSIVRALL 484          
BLAST of FC921980 vs. ExPASy Swiss-Prot
Match: SUT33_ARATH (Probable sulfate transporter 3.3 OS=Arabidopsis thaliana GN=SULTR3;3 PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.182e-56
Identity = 108/179 (60.34%), Postives = 138/179 (77.09%), Query Frame = 2
Query:    2 LKKGLNPPSFSDLVFVSPYLTTAIKTGIITGVIAMAEPVAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMSMAVMVTLLFLTPLFHYTPLVVLSAIIMAAMLGLIDYEAVIHLFKVDKFYFIECVVAHIGVGFVSIQIVLDIAISISV 538
            L +GLNPPS++ L F   +L    KTG++TG++++ E +AVGR+FA  KNYH+DGNKEMIA G+MN+ GS TSCY+TTG FSRSAVN NAG KTAVSNIVMS+ VMVTLLFL PLF YTP VVL AII+ A++GLID  A  H++K+DKF F+  + A  GV F+S+Q  L IA+ +S+
Sbjct:  290 LPEGLNPPSWNMLQFHGSHLALVAKTGLVTGIVSLTEGIAVGRTFAALKNYHVDGNKEMIAIGLMNVVGSATSCYVTTGAFSRSAVNNNAGAKTAVSNIVMSVTVMVTLLFLMPLFEYTPNVVLGAIIVTAVIGLIDLPAACHIWKIDKFDFLVMLCAFFGVIFLSVQNGLAIAVGLSL 468          
BLAST of FC921980 vs. ExPASy Swiss-Prot
Match: SUT12_ARATH (Sulfate transporter 1.2 OS=Arabidopsis thaliana GN=SULTR1;2 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.223e-53
Identity = 103/178 (57.87%), Postives = 135/178 (75.84%), Query Frame = 2
Query:    2 LKKGLNPPSFSDLVFVSPYLTTAIKTGIITGVIAMAEPVAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMSMAVMVTLLFLTPLFHYTPLVVLSAIIMAAMLGLIDYEAVIHLFKVDKFYFIECVVAHIGVGFVSIQIVLDIAISIS 535
            L +G+NP SF  + F    L   I+ G++ G++A+ E VA+GR+FA  K+Y IDGNKEM+A GMMN+ GS +SCY+ TG FSRSAVNF AGC+TAVSNI+MS+ V++TLLFLTPLF YTP  +L+AII+ A++ LID +A I +FKVDK  FI C+ A  GV FVS++I L IA+SIS
Sbjct:  315 LDQGINPSSFHLIYFTGDNLAKGIRIGVVAGMVALTEAVAIGRTFAAMKDYQIDGNKEMVALGMMNVVGSMSSCYVATGSFSRSAVNFMAGCQTAVSNIIMSIVVLLTLLFLTPLFKYTPNAILAAIIINAVIPLIDIQAAILIFKVDKLDFIACIGAFFGVIFVSVEIGLLIAVSIS 492          
BLAST of FC921980 vs. ExPASy Swiss-Prot
Match: SUT13_ARATH (Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.767e-52
Identity = 100/178 (56.18%), Postives = 133/178 (74.72%), Query Frame = 2
Query:    2 LKKGLNPPSFSDLVFVSPYLTTAIKTGIITGVIAMAEPVAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMSMAVMVTLLFLTPLFHYTPLVVLSAIIMAAMLGLIDYEAVIHLFKVDKFYFIECVVAHIGVGFVSIQIVLDIAISIS 535
            L KGLNP S   + F   YL    + G+++G++A+ E VA+GR+FA  K+Y IDGNKEM+A G MN+ GS TSCY++TG FSRSAVNF AGC+TAVSNI+MS+ V++TLLFLTPLF YTP  +L+AII+ A++ L+D  A I +FK+DK  F+ C+ A  GV FVS++I L IA+ IS
Sbjct:  318 LDKGLNPSSLRLIYFSGDYLLKGFRIGVVSGMVALTEAVAIGRTFAAMKDYQIDGNKEMVALGAMNVIGSMTSCYVSTGSFSRSAVNFMAGCQTAVSNIIMSIVVLLTLLFLTPLFKYTPNAILAAIIINAVIPLVDVNATILIFKIDKLDFVACMGAFFGVIFVSVEIGLLIAVGIS 495          
BLAST of FC921980 vs. ExPASy Swiss-Prot
Match: SUT2_STYHA (High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.307e-52
Identity = 97/178 (54.49%), Postives = 138/178 (77.53%), Query Frame = 2
Query:    2 LKKGLNPPSFSDLVFVSPYLTTAIKTGIITGVIAMAEPVAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMSMAVMVTLLFLTPLFHYTPLVVLSAIIMAAMLGLIDYEAVIHLFKVDKFYFIECVVAHIGVGFVSIQIVLDIAISIS 535
            +K G+NP S +++ F   YL   ++ G++ G++A+ E +A+GR+FA  K+Y IDGNKEM+A G MNI GS TSCY+TTG FSRSAVN+ AGCKTAVSNIVM++ V++TLL +TPLF YTP  VL++II+AA++ L++ EA++ L+K+DKF F+ C+ A  GV F S++I L IA++IS
Sbjct:  325 IKSGVNPSSANEIFFHGKYLGAGVRVGVVAGLVALTEAMAIGRTFAAMKDYSIDGNKEMVAMGTMNIVGSLTSCYVTTGSFSRSAVNYMAGCKTAVSNIVMAIVVLLTLLVITPLFKYTPNAVLASIIIAAVVNLVNIEAMVLLWKIDKFDFVACMGAFFGVIFKSVEIGLLIAVAIS 502          
BLAST of FC921980 vs. ExPASy Swiss-Prot
Match: SUT1_STYHA (High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 3.935e-52
Identity = 96/178 (53.93%), Postives = 138/178 (77.53%), Query Frame = 2
Query:    2 LKKGLNPPSFSDLVFVSPYLTTAIKTGIITGVIAMAEPVAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMSMAVMVTLLFLTPLFHYTPLVVLSAIIMAAMLGLIDYEAVIHLFKVDKFYFIECVVAHIGVGFVSIQIVLDIAISIS 535
            +K G+NP S +++ F   YL   ++ G++ G++A+ E +A+GR+FA  K+Y +DGNKEM+A G MNI GS +SCY+TTG FSRSAVN+ AGCKTAVSNIVMS+ V++TLL +TPLF YTP  VL++II+AA++ L++ EA++ L+K+DKF F+ C+ A  GV F S++I L IA++IS
Sbjct:  330 IKSGVNPSSANEIFFHGKYLGAGVRVGVVAGLVALTEAIAIGRTFAAMKDYALDGNKEMVAMGTMNIVGSLSSCYVTTGSFSRSAVNYMAGCKTAVSNIVMSIVVLLTLLVITPLFKYTPNAVLASIIIAAVVNLVNIEAMVLLWKIDKFDFVACMGAFFGVIFKSVEIGLLIAVAIS 507          
BLAST of FC921980 vs. ExPASy Swiss-Prot
Match: SUT3_STYHA (Low affinity sulfate transporter 3 OS=Stylosanthes hamata GN=ST3 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.266e-50
Identity = 100/175 (57.14%), Postives = 131/175 (74.86%), Query Frame = 2
Query:   11 GLNPPSFSDLVFVSPYLTTAIKTGIITGVIAMAEPVAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMSMAVMVTLLFLTPLFHYTPLVVLSAIIMAAMLGLIDYEAVIHLFKVDKFYFIECVVAHIGVGFVSIQIVLDIAISIS 535
            GLNP S   L    P++  A K G+I+ +IA+ E +AVGRSFA  K YH+DGNKEM+A G MNIAGS TSCY++TG FSR+AVNF+AGCKTAVSNIVM++ V++ L   T L +YTP+ +L++II++A+ GLID     H++KVDKF F+ C+ A  GV FVSI+I L IA+SIS
Sbjct:  306 GLNPSSVHKLQLNGPHVGQAAKIGLISAIIALTEAIAVGRSFANIKGYHLDGNKEMLAMGCMNIAGSLTSCYVSTGSFSRTAVNFSAGCKTAVSNIVMAVTVLLCLELFTRLLYYTPMAILASIILSALPGLIDIGEAYHIWKVDKFDFLACLGAFFGVLFVSIEIGLLIALSIS 480          
The following BLAST results are available for this feature:
BLAST of FC921980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SUT31_ARATH6.666e-7676.80Sulfate transporter 3.1 OS=Arabidopsis thaliana GN... [more]
SUT32_ARATH1.101e-7072.38Sulfate transporter 3.2 OS=Arabidopsis thaliana GN... [more]
SUT34_ARATH2.302e-6063.13Probable sulfate transporter 3.4 OS=Arabidopsis th... [more]
SUT35_ARATH1.949e-5962.50Probable sulfate transporter 3.5 OS=Arabidopsis th... [more]
SUT33_ARATH1.182e-5660.34Probable sulfate transporter 3.3 OS=Arabidopsis th... [more]
SUT12_ARATH1.223e-5357.87Sulfate transporter 1.2 OS=Arabidopsis thaliana GN... [more]
SUT13_ARATH1.767e-5256.18Sulfate transporter 1.3 OS=Arabidopsis thaliana GN... [more]
SUT2_STYHA2.307e-5254.49High affinity sulfate transporter 2 OS=Stylosanthe... [more]
SUT1_STYHA3.935e-5253.93High affinity sulfate transporter 1 OS=Stylosanthe... [more]
SUT3_STYHA1.266e-5057.14Low affinity sulfate transporter 3 OS=Stylosanthes... [more]

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Properties
Property NameValue
Genbank descriptionC06056B10T7 RindPdigS Citrus sinensis cDNA clone C06056B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921980 ID=FC921980; Name=FC921980; organism=Citrus sinensis; type=EST; length=578bp
CTTGAAGAAGGGATTGAATCCACCTTCATTTTCGGATTTGGTGTTCGTGT
CACCTTATCTCACAACAGCTATCAAAACTGGCATCATCACTGGCGTCATT
GCTATGGCTGAACCGGTAGCTGTAGGAAGAAGCTTTGCCATGTTCAAGAA
TTATCATATTGATGGGAACAAAGAGATGATAGCTTTCGGGATGATGAACA
TAGCTGGTTCTTGCACTTCTTGCTATCTCACAACAGGGCCGTTTTCGCGG
TCAGCTGTGAACTTCAATGCAGGATGCAAGACAGCAGTGTCGAACATTGT
TATGTCAATGGCAGTGATGGTCACATTGCTTTTCTTAACACCATTGTTCC
ATTACACTCCCCTTGTGGTTTTATCCGCAATCATAATGGCTGCGATGCTC
GGTCTCATTGACTACGAAGCAGTCATCCATCTATTTAAAGTTGACAAATT
TTATTTCATAGAGTGCGTTGTGGCACACATTGGCGTGGGCTTTGTCAGCA
TCCAAATTGTGTTAGACATTGCGATATCAATTTCTGTGCGCAGAGGACAT
CTGCCGCGACAACACTATATAAATTTTG
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