FC921974

Overview
NameFC921974
Unique NameFC921974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length383
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4978 contig Csv1_Contig4978:739..1121. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921974 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 5.383e-25
Identity = 56/110 (50.91%), Postives = 69/110 (62.73%), Query Frame = 1
Query:    7 IAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHTGSVDDHYHQVELAETEXXXXXXXXXXXXCMGMALGSEMSVVLLARLLQGFEWSAPSGEEKIDLSESKYDLLM 336
            IAGY +PKGSHV+LSR GLGRNP VW +PL+F P+RH  +       V L E +            C+  +LG+ MSV+L  RLLQGF WS P+G E +DLSESK D  M
Sbjct:  430 IAGYRVPKGSHVILSRTGLGRNPRVWDEPLRFYPDRHLATAAS---DVALTENDLRFISFSTGRRGCIAASLGTAMSVMLFGRLLQGFTWSKPAGVEAVDLSESKSDTFM 536          
BLAST of FC921974 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.489e-24
Identity = 56/110 (50.91%), Postives = 72/110 (65.45%), Query Frame = 1
Query:    7 IAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHTGSVDDHYHQVELAETEXXXXXXXXXXXXCMGMALGSEMSVVLLARLLQGFEWSAPSGEEKIDLSESKYDLLM 336
            + GYFIPKGSHVL+SR+G+GRNP+VW  P KF PERH  +       V+L E++            CMG+ +GS M+ +LLARL+QGF W    G+ KID+SESK DL M
Sbjct:  405 VDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLST----NTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTWLPVPGKNKIDISESKNDLFM 510          
BLAST of FC921974 vs. ExPASy Swiss-Prot
Match: C79B1_SINAL (Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.594e-23
Identity = 52/110 (47.27%), Postives = 65/110 (59.09%), Query Frame = 1
Query:    7 IAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHTGSVDDHYHQVELAETEXXXXXXXXXXXXCMGMALGSEMSVVLLARLLQGFEWSAPSGEEKIDLSESKYDLLM 336
            +AGY IPKGS VLLSR GLGRNP VW DPL F PERH         +V L E +            C   ALG+ ++ +LLARLLQGF W  P  E +++L ES +D+ +
Sbjct:  416 VAGYHIPKGSQVLLSRYGLGRNPKVWADPLSFKPERHLNECS----EVTLTENDLRFISFSTGKRGCAAPALGTALTTMLLARLLQGFTWKLPENETRVELMESSHDMFL 521          
BLAST of FC921974 vs. ExPASy Swiss-Prot
Match: C79B2_ARATH (Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 3.266e-22
Identity = 51/110 (46.36%), Postives = 65/110 (59.09%), Query Frame = 1
Query:    7 IAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHTGSVDDHYHQVELAETEXXXXXXXXXXXXCMGMALGSEMSVVLLARLLQGFEWSAPSGEEKIDLSESKYDLLM 336
            +AGY IPKGS VLLSR GLGRNP VW DPL F PERH         +V L E +            C   ALG+ ++ ++LARLLQGF W  P  E +++L ES +D+ +
Sbjct:  415 VAGYHIPKGSQVLLSRYGLGRNPKVWADPLCFKPERHLNECS----EVTLTENDLRFISFSTGKRGCAAPALGTALTTMMLARLLQGFTWKLPENETRVELMESSHDMFL 520          
BLAST of FC921974 vs. ExPASy Swiss-Prot
Match: C79B3_ARATH (Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.275e-22
Identity = 50/110 (45.45%), Postives = 65/110 (59.09%), Query Frame = 1
Query:    7 IAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHTGSVDDHYHQVELAETEXXXXXXXXXXXXCMGMALGSEMSVVLLARLLQGFEWSAPSGEEKIDLSESKYDLLM 336
            +AGY IPKGS VLLSR GLGRNP VW DPL F PERH         +V L E +            C   ALG+ ++ ++LARLLQGF+W     E +++L ES +D+ +
Sbjct:  417 VAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECS----EVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSHDMFL 522          
BLAST of FC921974 vs. ExPASy Swiss-Prot
Match: C79F1_ARATH (Dihomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.893e-20
Identity = 50/110 (45.45%), Postives = 62/110 (56.36%), Query Frame = 1
Query:    7 IAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHTGSVDDHYHQVELAETEXXXXXXXXXXXXCMGMALGSEMSVVLLARLLQGFEWSAPSGEEKIDLSESKYDLLM 336
            + GYFIPKGSH+ + R GLGRNP +WKDPL + PERH    D    +V L ETE            C+G+ +G+ M V+LLAR LQGF W        + L E    LLM
Sbjct:  408 LGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYKPERHLQG-DGITKEVTLVETEMRFVSFSTGRRGCIGVKVGTIMMVMLLARFLQGFNWKLHQDFGPLSLEEDDASLLM 516          
BLAST of FC921974 vs. ExPASy Swiss-Prot
Match: C79F2_ARATH (Hexahomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F2 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 4.414e-19
Identity = 48/110 (43.64%), Postives = 61/110 (55.45%), Query Frame = 1
Query:    7 IAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHTGSVDDHYHQVELAETEXXXXXXXXXXXXCMGMALGSEMSVVLLARLLQGFEWSAPSGEEKIDLSESKYDLLM 336
            + GYFIPKGSH+ + R GLGRNP +WKDPL + PERH    D    +V L ETE            C+G+ +G+ M  ++LAR LQGF W        + L E    LLM
Sbjct:  407 LGGYFIPKGSHIHVCRPGLGRNPKIWKDPLAYEPERHLQG-DGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMAMMLARFLQGFNWKLHRDFGPLSLEEDDASLLM 515          
BLAST of FC921974 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.778e-11
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 1
Query:    7 IAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHTGSVDDHYHQVELAETEXXXXXXXXXXXXCMGMALGSEMSVVLLARLLQGFEWSAPSGE--EKIDLSES 318
            I GYFIPKGS +LL+   + R+PN W DPL+F PER     +    +V++   +            C GM LG  M  +++A L+  F W   SG+  E +++ E+
Sbjct:  383 INGYFIPKGSTLLLNVWAIARDPNAWADPLEFRPERFLPGGEK--PKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDLVSGQLPEMLNMEEA 486          
The following BLAST results are available for this feature:
BLAST of FC921974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
C79A1_SORBI5.383e-2550.91Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
C79A2_ARATH3.489e-2450.91Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
C79B1_SINAL8.594e-2347.27Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE... [more]
C79B2_ARATH3.266e-2246.36Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana... [more]
C79B3_ARATH7.275e-2245.45Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana... [more]
C79F1_ARATH8.893e-2045.45Dihomomethionine N-hydroxylase OS=Arabidopsis thal... [more]
C79F2_ARATH4.414e-1943.64Hexahomomethionine N-hydroxylase OS=Arabidopsis th... [more]
F3PH_PETHY5.778e-1134.91Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
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Properties
Property NameValue
Genbank descriptionC06056B04T7 RindPdigS Citrus sinensis cDNA clone C06056B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921974 ID=FC921974; Name=FC921974; organism=Citrus sinensis; type=EST; length=383bp
CGCGGGATCGCCGGTTACTTCATTCCCAAAGGCAGTCACGTTCTGCTGAG
CCGAATAGGGCTTGGCCGGAACCCTAACGTCTGGAAAGATCCATTGAAAT
TCATACCTGAACGTCATACTGGTTCAGTGGACGATCATTATCATCAAGTA
GAGTTGGCGGAAACAGAATTAAGATTCCTTTCATTCAGCAGAGGAAGGCG
CAGTTGTATGGGCATGGCACTCGGCTCTGAGATGTCTGTAGTGCTTTTGG
CAAGGCTTCTTCAAGGGTTTGAATGGAGCGCGCCATCGGGTGAGGAGAAG
ATTGACCTCTCCGAATCAAAATACGACCTCCTTATGGCTAAACCATTGCC
TGCACGTGCAAAGCCCCGGTTGGCTGCTGAGTT
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