CX047732

Overview
NameCX047732
Unique NameCX047732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length766
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX047732 vs. ExPASy Swiss-Prot
Match: WRN_HUMAN (Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.436e-11
Identity = 49/153 (32.03%), Postives = 75/153 (49.02%), Query Frame = 1 
Query:  241 IVGLDLEWRPSFSRVQ-NPVAIIQLCVGR-RCLIFQLIHAQTIPRSLVGFLSTECYSFVGVGIKKDLEKLEDFYGITVQGNVVELGRLAGDRKGRTDLVNAGLKNLAREVLGLDFEKPRRVTMSRWDKRWLDPAQVQYACIDSFVSFELGRVL 693
            +VG D+EW P ++R +   VA+IQLCV   +C +F +      P+ L   L  +     GVGI+ D  KL   + I ++ N VEL  +A  +   T+     L +L + +LG    K + +  S W K  L   Q  YA  D++  F + R L
Sbjct:   78 VVGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHVSSMSVFPQGLKMLLENKAVKKAGVGIEGDQWKLLRDFDIKLK-NFVELTDVANKKLKCTE--TWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
The following BLAST results are available for this feature:
BLAST of CX047732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WRN_HUMAN4.436e-1132.03Werner syndrome ATP-dependent helicase OS=Homo sap... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_16B12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-16B12-C23-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047732 ID=CX047732; Name=CX047732; organism=Citrus sinensis; type=EST; length=766bp
GAAACTTCAGCCTCTGCAGAGGGAAAAAAAAAAAAAAATTTCCCATTAAA
GCAAGCAAAGCAAACCAACAAAATGACGATAAGCATATACGACCACCAAC
TGCCGTACGACTCCCACAACAGGTACGACGTGACTTTCTTCGACAACCAG
ATCCGGACCGTCGTCACCACCGAGGAAGACCCCGTCGACGAATGGGTCTC
CGACATCGAACGAGTCCACCGCAACAAGCTCCCCCGCCTCATCGTGGGGC
TCGACTTGGAGTGGCGGCCCAGCTTCAGCCGGGTCCAGAATCCCGTGGCC
ATCATCCAGCTCTGCGTCGGCCGCCGGTGCCTGATATTCCAACTCATCCA
CGCCCAGACCATCCCTCGGTCCCTCGTCGGGTTTCTCTCGACGGAGTGCT
ACTCGTTCGTCGGGGTGGGCATCAAAAAAGATCTGGAAAAGCTGGAGGAC
TTCTATGGGATAACGGTCCAAGGGAATGTGGTGGAATTGGGACGGCTGGC
TGGCGACAGAAAGGGGAGGACTGATTTGGTGAACGCGGGGTTGAAGAATT
TGGCGCGTGAGGTTTTGGGGTTGGACTTTGAGAAGCCGAGAAGGGTGACG
ATGAGTCGCTGGGACAAACGTTGGCTTGATCCTGCTCAGGTTCAGTATGC
TTGCATTGACTCTTTCGTTTCCTTTGAGCTTGGGAGGGTGCTTAGGGATT
AGTTTCCACATCCGCCCTCGGTTCTCGTAATTGCTAATGCTACTCGTTTT
TTTTTTTTTTTTTTTT
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