CX047731

Overview
NameCX047731
Unique NameCX047731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: LEGB_GOSHI (Legumin B OS=Gossypium hirsutum GN=LEGB PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 7.767e-68
Identity = 121/182 (66.48%), Postives = 150/182 (82.42%), Query Frame = -2
Query:  171 NGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 716
            NG+EET C+M+LKH     S AD +NPRGGR+TTVN FNLPIL+Y+QLSAE+G LY NA+ APHWN+NAHS+VYITRGNGR+QIV+ENGE +FD Q+  GQ+I VPQ  AVVK+A  RG EWI+FKTN  AK SQ+AGR S++RGLP+DV+ NSF +SR+EA RLK+NRQE++VF+P   SQ
Sbjct:  335 NGLEETFCSMRLKHR-TPASSADVFNPRGGRITTVNSFNLPILQYLQLSAERGVLYNNAIYAPHWNMNAHSIVYITRGNGRIQIVSENGEAIFDEQVERGQVITVPQNHAVVKKAGRRGFEWIAFKTNANAKISQIAGRVSIMRGLPVDVLANSFGISREEAMRLKHNRQEVSVFSPRQGSQ 515          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: 11SB_CUCMA (11S globulin subunit beta OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.377e-63
Identity = 119/226 (52.65%), Postives = 166/226 (73.45%), Query Frame = -2
Query:  171 KLQRPQMQKGIIVRVEEELRVLSPQRG---RXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 839
            KL+    ++  IV+V+E+  VL P++    R        +   +NG+EETICT++LK NI     AD +NPRGGR++T N   LPILR ++LSAE+G LY NAM+APH+ +N+HSV+Y TRGN R+Q+V   G++VFDG++REGQ++++PQ F V+KRAS+RG EWI+FKTND A T+ LAGR S +R LPL V+ N +++SR+EAQRLKY +QE+ V +PG RSQ
Sbjct:  252 KLKGEDDERDRIVQVDEDFEVLLPEKDEEERSRGRYIESESESENGLEETICTLRLKQNIGRSVRADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVVIKRASDRGFEWIAFKTNDNAITNLLAGRVSQMRMLPLGVLSNMYRISREEAQRLKYGQQEMRVLSPG-RSQ 476          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: GLUA1_ORYSJ (Glutelin type-A 1 OS=Oryza sativa subsp. japonica GN=GLUA1 PE=1 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.769e-57
Identity = 112/235 (47.66%), Postives = 159/235 (67.66%), Query Frame = -2
Query:  186 KLQRPQMQKGIIVRVEEELRVLSP---------------QRGRXXXXXXXXQGSG-DNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 839
            +LQ    Q+G IVRVE  L +L P               +R +         GSG  NG++ET CT++++ NI++P+ AD YNPR GRVT +N  N PIL  +Q+SA K NLYQNA+++P WN+NAHSVVYIT+G  R+Q+V  NG+ VF+G++R GQL+++PQ +AVVK+A   G  +I+FKTN  +  S +AG++S+ R LP DV+ N++++SR+EAQRLK+NR  E   FTP
Sbjct:  249 QLQCQNDQRGEIVRVEHGLSLLQPYASLQEQEQGQVQSRERYQEGQYQQSQYGSGCSNGLDETFCTLRVRQNIDNPNRADTYNPRAGRVTNLNTQNFPILSLVQMSAVKVNLYQNALLSPFWNINAHSVVYITQGRARVQVVNNNGKTVFNGELRRGQLLIIPQHYAVVKKAQREGCAYIAFKTNPNSMVSHIAGKSSIFRALPNDVLANAYRISREEAQRLKHNRGDEFGAFTP 483          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: LEGA_GOSHI (Legumin A OS=Gossypium hirsutum GN=LEGA PE=2 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 8.056e-57
Identity = 104/227 (45.81%), Postives = 153/227 (67.40%), Query Frame = -2
Query:  186 KLQRPQMQKGIIVRVEEELRVLSP---------QRGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 839
            K+QR +  +G I+RV + L+V++P         +R +         GS DNG+EET C+M++K N+ DP  AD +NP+ GR++T+NRFNLPIL+ ++LSAE+G LY  A + P WN+NAH ++Y+ RG  R+Q+V  NG+ VFD  + +GQL+ VPQ FA +K+A N G EWISF TN  A  + +AG  S +R LP +V+  S+QVSR++A+R+K+N +    FTP
Sbjct:  274 KIQRVRGNRGTIIRVRDRLQVVTPPRMEEEEREERQQEQRYRHTRGGSQDNGLEETFCSMRIKENLADPERADIFNPQAGRISTLNRFNLPILQRLELSAERGVLYNRAGLIPQWNVNAHKILYMLRGCARVQVVNHNGDAVFDDNVEQGQLLTVPQNFAFMKQAGNEGAEWISFFTNSEATNTPMAGSVSFMRALPEEVVAASYQVSREDARRIKFNNKNTFFFTP 500          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: GLUA2_ORYSJ (Glutelin type-A 2 OS=Oryza sativa subsp. japonica GN=GLUA2 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.344e-56
Identity = 110/235 (46.81%), Postives = 157/235 (66.81%), Query Frame = -2
Query:  186 KLQRPQMQKGIIVRVEEELRVLSP---------------QRGRXXXXXXXXQGSG-DNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 839
            +LQ    Q+G IVRVE  L +L P               +  +         GSG  NG++ET CTM+++ NI++P+ AD YNPR GRVT +N  N PIL  +Q+SA K NLYQNA+++P WN+NAHS+VYIT+G  ++Q+V  NG+ VF+G++R GQL++VPQ + VVK+A   G  +I+FKTN  +  S +AG++S+ R LP DV+ N++++SR+EAQRLK+NR  E   FTP
Sbjct:  249 QLQCQNDQRGEIVRVERGLSLLQPYASLQEQEQGQMQSREHYQEGGYQQSQYGSGCPNGLDETFCTMRVRQNIDNPNRADTYNPRAGRVTNLNSQNFPILNLVQMSAVKVNLYQNALLSPFWNINAHSIVYITQGRAQVQVVNNNGKTVFNGELRRGQLLIVPQHYVVVKKAQREGCAYIAFKTNPNSMVSHIAGKSSIFRALPTDVLANAYRISREEAQRLKHNRGDEFGAFTP 483          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: 13S1_FAGES (13S globulin seed storage protein 1 OS=Fagopyrum esculentum GN=FA02 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.998e-56
Identity = 112/228 (49.12%), Postives = 152/228 (66.67%), Query Frame = -2
Query:  186 SKLQRPQMQKGIIVRVEE-ELRV-------LSPQRGRXXXXXXXXQGSG-DNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 842
            SKL+    Q+G IV+  + +LRV       L  +RG          GSG  NG+E+  C +K K N+N PS AD +NPR GR+ TVN  NLPIL +IQLSA+   LY+NA++ P WNLNAHS +Y+TRG GR+Q+V + G +VFD  ++ GQ++VVPQGFAVV +A   GLEW+  K +D A TS +AG+ SV+R +P++V+ NS+ +S  EA RLK  RQE+ VF P
Sbjct:  331 SKLRGDNDQRGFIVQARDLKLRVPEEYEEELQRERG-----DRKRGGSGRSNGLEQAFCNLKFKQNVNRPSRADVFNPRAGRINTVNSNNLPILEFIQLSAQHVVLYKNAILGPRWNLNAHSALYVTRGEGRVQVVGDEGRSVFDDNVQRGQILVVPQGFAVVLKAGREGLEWVELKNDDNAITSPIAGKTSVLRAIPVEVLANSYDISTKEAFRLKNGRQEVEVFLP 553          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: 12S1_ARATH (12S seed storage protein CRA1 OS=Arabidopsis thaliana GN=CRA1 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 5.222e-56
Identity = 109/227 (48.02%), Postives = 157/227 (69.16%), Query Frame = -2
Query:  174 KLQRPQMQKGIIVRVEEELRVLSP----QRGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV-FTPGPRS 839
            +LQ     +G IVRV+    V+ P    QR +         G   NG+EETIC+ +   N++DPS AD Y P+ G ++T+N ++LPILR+I+LSA +G++ QNAM+ P WN NA++++Y+T G  ++QIV +NG  VFDGQ+ +GQLI VPQGF+VVKRA++   +W+ FKTN  A+ + LAGR SV+RGLPL+VI N FQ+S +EA+R+K+N  E T+  + GP S
Sbjct:  237 QLQNQDDNRGNIVRVQGPFGVIRPPLRGQRPQEEEEEEGRHGRHGNGLEETICSARCTDNLDDPSRADVYKPQLGYISTLNSYDLPILRFIRLSALRGSIRQNAMVLPQWNANANAILYVTDGEAQIQIVNDNGNRVFDGQVSQGQLIAVPQGFSVVKRATSNRFQWVEFKTNANAQINTLAGRTSVLRGLPLEVITNGFQISPEEARRVKFNTLETTLTHSSGPAS 463          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: GLUA3_ORYSJ (Glutelin type-A 3 OS=Oryza sativa subsp. japonica GN=GLUA3 PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 8.907e-56
Identity = 110/234 (47.01%), Postives = 155/234 (66.24%), Query Frame = -2
Query:  186 KLQRPQMQKGIIVRVEEELRVLSPQR---------------GRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 839
            +LQ    Q+G IVRVE  L +L P                 G+        QGS  NG++ET CTM+++ NI++P+ AD YNPR GR+T +N    PIL  +Q+SA K NLYQNA+++P WN+NAHSVVYIT+G  R+Q+V  NG+ VFDG++R GQL+++PQ   V+K+A   G  +I+ KTN  +  S +AG+ S+ R LP DV+ N++++SR+EA+RLK+NR  EL VFTP
Sbjct:  249 QLQCQNDQRGEIVRVEHGLSLLQPYASLQEQQQEQVQSRDYGQTQYQQKQLQGSCSNGLDETFCTMRVRQNIDNPNLADTYNPRAGRITYLNGQKFPILNLVQMSAVKVNLYQNALLSPFWNINAHSVVYITQGRARVQVVNNNGKTVFDGELRRGQLLIIPQHHVVIKKAQREGCSYIALKTNPDSMVSHMAGKNSIFRALPDDVVANAYRISREEARRLKHNRGDELGVFTP 482          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: 13S3_FAGES (13S globulin seed storage protein 3 OS=Fagopyrum esculentum GN=FAGAG1 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.385e-55
Identity = 110/228 (48.25%), Postives = 152/228 (66.67%), Query Frame = -2
Query:  186 SKLQRPQMQKGIIVRVEE-ELRV-------LSPQRGRXXXXXXXXQGSG-DNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 842
            SKL+    Q+G IV+  + +LRV       L  +RG          GSG  NG+E+  C +K + N+N PS AD +NPR GR+ TV+  NLPIL +IQLSA+   LY+NA++ P WNLNAHS +Y+TRG GR+Q+V + G +VFD  ++ GQ++VVPQGFAVV +A   GLEW+  K +D A TS +AG+ SV+R +P++V+ NS+ +S  EA RLK  RQE+ VF P
Sbjct:  301 SKLRGENDQRGFIVQARDLKLRVPEEYEEELQRERG-----DRKRGGSGRSNGLEQAFCNLKFRQNVNRPSRADVFNPRAGRINTVDSNNLPILEFIQLSAQHVVLYKNAILGPRWNLNAHSALYVTRGEGRVQVVGDEGRSVFDDNVQRGQILVVPQGFAVVLKAGREGLEWVELKNDDNAITSPIAGKTSVLRAIPVEVLANSYDISTKEAFRLKNGRQEVEVFRP 523          
BLAST of CX047731 vs. ExPASy Swiss-Prot
Match: CRU4_BRANA (Cruciferin CRU4 OS=Brassica napus GN=CRU4 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.286e-54
Identity = 104/215 (48.37%), Postives = 155/215 (72.09%), Query Frame = -2
Query:  195 KLQRPQMQKGIIVRVEEELRVLSPQRGRXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAKTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV 839
            KLQ  Q+ +G IV+V+ +  V+ P   R        Q  G NG+EET+CTM+   N++DPS AD Y P  G ++T+N +NLPILR+++LSA +G+++ NAM+ P WN+NA++ +Y+T+G   +Q V +NG+ VFD +I +GQL+VVPQGFAVVKRA+++  +WI FK+ND A+ + LAGR SV+RGLPL+VI N +Q+S  EA+ +K++  E T+
Sbjct:  237 KLQNQQVNRGNIVKVQGQFGVIRPPL-RQGQGGQQPQEEG-NGLEETLCTMRCTENLDDPSSADVYKPSLGYISTLNSYNLPILRFLRLSALRGSIHNNAMVLPQWNVNANAALYVTKGKAHIQNVNDNGQRVFDQEISKGQLLVVPQGFAVVKRATSQQFQWIEFKSNDNAQINTLAGRTSVMRGLPLEVISNGYQISPQEARSVKFSTLETTL 449          
The following BLAST results are available for this feature:
BLAST of CX047731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
LEGB_GOSHI7.767e-6866.48Legumin B OS=Gossypium hirsutum GN=LEGB PE=2 SV=1[more]
11SB_CUCMA3.377e-6352.6511S globulin subunit beta OS=Cucurbita maxima PE=1... [more]
GLUA1_ORYSJ2.769e-5747.66Glutelin type-A 1 OS=Oryza sativa subsp. japonica ... [more]
LEGA_GOSHI8.056e-5745.81Legumin A OS=Gossypium hirsutum GN=LEGA PE=2 SV=2[more]
GLUA2_ORYSJ2.344e-5646.81Glutelin type-A 2 OS=Oryza sativa subsp. japonica ... [more]
13S1_FAGES3.998e-5649.1213S globulin seed storage protein 1 OS=Fagopyrum e... [more]
12S1_ARATH5.222e-5648.0212S seed storage protein CRA1 OS=Arabidopsis thali... [more]
GLUA3_ORYSJ8.907e-5647.01Glutelin type-A 3 OS=Oryza sativa subsp. japonica ... [more]
13S3_FAGES3.385e-5548.2513S globulin seed storage protein 3 OS=Fagopyrum e... [more]
CRU4_BRANA1.286e-5448.37Cruciferin CRU4 OS=Brassica napus GN=CRU4 PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_16B11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-16B11-C21-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047731 ID=CX047731; Name=CX047731; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTTTTACGGCAAAAACATTTAGTTTTCTTATTTCACCA
GAACAAAACTTACAGCAGCAGTACACTTTCGAGCCAACAGCAAGGACTTT
ATTCCTTATGTACACACATATATAAACCCTTAATATAAGTTCATTACTTT
GATCACGCACTAACTAATTACTGTGACCTAGGCCCTGGAGTAAAGACAGT
CAGCTCCTGCCTGTTGTACTTCAACCTCTGAGCTTCATCCCTCGACACTT
GGAACGAGTTCTGGATAACGTCCAACGGCAGCCCTCTAATCACCGAAGCC
CTTCCGGCCAGCTGGCTTGTCTTGGCGACGTCGTTTGTCTTGAATGATAT
CCACTCCAATCCACGGTTGCTTGCCCTCTTCACCACGGCGAAGCCCTGCG
GGACAACGATCAGCTGACCCTCCCGGATTTGACCGTCGAACACATTCTCC
CCGTTCTCCGCCACAATTTGCATCCTGCCGTTGCCCCTTGTTATGTAGAC
TACGCTGTGGGCATTCAAGTTCCAGTGTGGCGCCATCATGGCATTCTGGT
AGAGGTTCCCTTTCTCAGCACTAAGCTGAATGTATCGAAGGATAGGAAGG
TTGAATCTGTTGACGGTGGTGACGCGTCCGCCGCGGGGGTTGTACGCGTC
AGCACCCGATGGGTCATTGATGTTGTGCTTTAGCTTCATTGTACAGATAG
TTTCCTCGATGCCGTTGTCTCCGCTTCCTTGGAATTCTTGTTCTTGTTCT
TGTTCTCTGCCTCTTTGAGGTGACAGTACTCTCAGCTCTTCCTCGACTCT
GACAATAATCCCCTTCTGCATCTGTGGCCTCTGCAGTTTACTG
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