CX047703

Overview
NameCX047703
Unique NameCX047703
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047703 vs. ExPASy Swiss-Prot
Match: LEGB_GOSHI (Legumin B OS=Gossypium hirsutum GN=LEGB PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 9.748e-61
Identity = 113/173 (65.32%), Postives = 140/173 (80.92%), Query Frame = -1
Query:  222 MKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 740
            M+L+H     S ADV+NPR GR+TTVN FNLPIL+ LQLSAE+G LY NA+ AP WN+NAHSIVY+TRGNGR+QIV+ENGE +FD Q+  GQ+I VPQ  AVVK+AG RG EWI+FKTN  A  SQ+AGR S++RGLP+DV+ NSF +SR+EA RLK+NRQE++VF+P   SQ
Sbjct:  344 MRLKHRTPASS-ADVFNPRGGRITTVNSFNLPILQYLQLSAERGVLYNNAIYAPHWNMNAHSIVYITRGNGRIQIVSENGEAIFDEQVERGQVITVPQNHAVVKKAGRRGFEWIAFKTNANAKISQIAGRVSIMRGLPVDVLANSFGISREEAMRLKHNRQEVSVFSPRQGSQ 515          
BLAST of CX047703 vs. ExPASy Swiss-Prot
Match: 11SB_CUCMA (11S globulin subunit beta OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.969e-53
Identity = 96/173 (55.49%), Postives = 137/173 (79.19%), Query Frame = -1
Query:  222 MKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 740
            ++L+ NI +   ADV+NPR GR++T N   LPILR ++LSAE+G LY NA++AP + +N+HS++Y TRGN R+Q+V   G++VFDG++REGQ++++PQ F V+KRA +RG EWI+FKTND A+T+ LAGR S +R LPL V+ N +++SR+EAQRLKY +QE+ V +PG RSQ
Sbjct:  305 LRLKQNIGRSVRADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVVIKRASDRGFEWIAFKTNDNAITNLLAGRVSQMRMLPLGVLSNMYRISREEAQRLKYGQQEMRVLSPG-RSQ 476          
BLAST of CX047703 vs. ExPASy Swiss-Prot
Match: 13SB_FAGES (13S globulin basic chain OS=Fagopyrum esculentum PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.667e-52
Identity = 93/162 (57.41%), Postives = 124/162 (76.54%), Query Frame = -1
Query:  255 MKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQE 740
            MKLR NI  P  AD YNP+AGR+TT N   LP LR LQ+SAE+G LY N + AP WN+NAHS +YVTRGN ++Q+V + G  VFD ++++GQLI+VPQ FAV+K+AGN+G E+++FKTND AM + L GR S  R +P +V+++SFQ+S +EA+ LKY RQE
Sbjct:    9 MKLRENIKSPQEADFYNPKAGRITTANSQKLPALRSLQMSAERGFLYSNGIYAPHWNINAHSALYVTRGNAKVQVVGDEGNKVFDDEVKQGQLIIVPQYFAVIKKAGNQGFEYVAFKTNDNAMINPLVGRLSAFRAIPEEVLRSSFQISSEEAEELKYGRQE 170          
BLAST of CX047703 vs. ExPASy Swiss-Prot
Match: 13S1_FAGES (13S globulin seed storage protein 1 OS=Fagopyrum esculentum GN=FA02 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.667e-52
Identity = 95/168 (56.55%), Postives = 128/168 (76.19%), Query Frame = -1
Query:  237 MKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 740
            +K + N+++PS ADV+NPRAGR+ TVN  NLPIL  +QLSA+   LY NA+L P+WNLNAHS +YVTRG GR+Q+V + G +VFD  ++ GQ++VVPQGFAVV +AG  GLEW+  K +D A+TS +AG+ SVLR +P++V+ NS+ +S  EA RLK  RQE+ VF P
Sbjct:  386 LKFKQNVNRPSRADVFNPRAGRINTVNSNNLPILEFIQLSAQHVVLYKNAILGPRWNLNAHSALYVTRGEGRVQVVGDEGRSVFDDNVQRGQILVVPQGFAVVLKAGREGLEWVELKNDDNAITSPIAGKTSVLRAIPVEVLANSYDISTKEAFRLKNGRQEVEVFLP 553          
BLAST of CX047703 vs. ExPASy Swiss-Prot
Match: 13S3_FAGES (13S globulin seed storage protein 3 OS=Fagopyrum esculentum GN=FAGAG1 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.843e-52
Identity = 95/168 (56.55%), Postives = 128/168 (76.19%), Query Frame = -1
Query:  237 MKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 740
            +K R N+++PS ADV+NPRAGR+ TV+  NLPIL  +QLSA+   LY NA+L P+WNLNAHS +YVTRG GR+Q+V + G +VFD  ++ GQ++VVPQGFAVV +AG  GLEW+  K +D A+TS +AG+ SVLR +P++V+ NS+ +S  EA RLK  RQE+ VF P
Sbjct:  356 LKFRQNVNRPSRADVFNPRAGRINTVDSNNLPILEFIQLSAQHVVLYKNAILGPRWNLNAHSALYVTRGEGRVQVVGDEGRSVFDDNVQRGQILVVPQGFAVVLKAGREGLEWVELKNDDNAITSPIAGKTSVLRAIPVEVLANSYDISTKEAFRLKNGRQEVEVFRP 523          
BLAST of CX047703 vs. ExPASy Swiss-Prot
Match: GLUA2_ORYSJ (Glutelin type-A 2 OS=Oryza sativa subsp. japonica GN=GLUA2 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.002e-51
Identity = 94/169 (55.62%), Postives = 129/169 (76.33%), Query Frame = -1
Query:  237 MKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 740
            M++R NID P+ AD YNPRAGRVT +N  N PIL  +Q+SA K NLY NALL+P WN+NAHSIVY+T+G  ++Q+V  NG+ VF+G++R GQL++VPQ + VVK+A   G  +I+FKTN  +M S +AG++S+ R LP DV+ N++++SR+EAQRLK+NR  E   FTP
Sbjct:  315 MRVRQNIDNPNRADTYNPRAGRVTNLNSQNFPILNLVQMSAVKVNLYQNALLSPFWNINAHSIVYITQGRAQVQVVNNNGKTVFNGELRRGQLLIVPQHYVVVKKAQREGCAYIAFKTNPNSMVSHIAGKSSIFRALPTDVLANAYRISREEAQRLKHNRGDEFGAFTP 483          
BLAST of CX047703 vs. ExPASy Swiss-Prot
Match: GLUA1_ORYSJ (Glutelin type-A 1 OS=Oryza sativa subsp. japonica GN=GLUA1 PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 7.002e-51
Identity = 93/169 (55.03%), Postives = 130/169 (76.92%), Query Frame = -1
Query:  237 MKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 740
            +++R NID P+ AD YNPRAGRVT +N  N PIL  +Q+SA K NLY NALL+P WN+NAHS+VY+T+G  R+Q+V  NG+ VF+G++R GQL+++PQ +AVVK+A   G  +I+FKTN  +M S +AG++S+ R LP DV+ N++++SR+EAQRLK+NR  E   FTP
Sbjct:  315 LRVRQNIDNPNRADTYNPRAGRVTNLNTQNFPILSLVQMSAVKVNLYQNALLSPFWNINAHSVVYITQGRARVQVVNNNGKTVFNGELRRGQLLIIPQHYAVVKKAQREGCAYIAFKTNPNSMVSHIAGKSSIFRALPNDVLANAYRISREEAQRLKHNRGDEFGAFTP 483          
BLAST of CX047703 vs. ExPASy Swiss-Prot
Match: 13S2_FAGES (13S globulin seed storage protein 2 OS=Fagopyrum esculentum GN=FA18 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.018e-49
Identity = 90/168 (53.57%), Postives = 125/168 (74.40%), Query Frame = -1
Query:  237 MKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 740
            +K R N + P++  V+NPRAGR+ TVN  +LPIL  LQLSA+   LY NA++ P+WNLNAHS +YVTRG GR+Q+V + G++VFD +++ GQ++VVPQGFAVV +AG  GLEW+  K +  A+TS + GR SVLR +P++V+ NS+ +S  EA +LK  RQE+ VF P
Sbjct:  322 LKFRRNFNTPTNTYVFNPRAGRINTVNSNSLPILEFLQLSAQHVVLYKNAIIGPRWNLNAHSALYVTRGEGRVQVVGDEGKSVFDDKVQRGQILVVPQGFAVVLKAGREGLEWVELKNSGNAITSPIGGRTSVLRAIPVEVLANSYDISTKEAYKLKNGRQEVEVFRP 489          
BLAST of CX047703 vs. ExPASy Swiss-Prot
Match: GLUA3_ORYSJ (Glutelin type-A 3 OS=Oryza sativa subsp. japonica GN=GLUA3 PE=2 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 6.554e-49
Identity = 91/169 (53.85%), Postives = 127/169 (75.15%), Query Frame = -1
Query:  237 MKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 740
            M++R NID P+ AD YNPRAGR+T +N    PIL  +Q+SA K NLY NALL+P WN+NAHS+VY+T+G  R+Q+V  NG+ VFDG++R GQL+++PQ   V+K+A   G  +I+ KTN  +M S +AG+ S+ R LP DV+ N++++SR+EA+RLK+NR  EL VFTP
Sbjct:  314 MRVRQNIDNPNLADTYNPRAGRITYLNGQKFPILNLVQMSAVKVNLYQNALLSPFWNINAHSVVYITQGRARVQVVNNNGKTVFDGELRRGQLLIIPQHHVVIKKAQREGCSYIALKTNPDSMVSHMAGKNSIFRALPDDVVANAYRISREEARRLKHNRGDELGVFTP 482          
BLAST of CX047703 vs. ExPASy Swiss-Prot
Match: LEGA_GOSHI (Legumin A OS=Gossypium hirsutum GN=LEGA PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.460e-48
Identity = 88/168 (52.38%), Postives = 124/168 (73.81%), Query Frame = -1
Query:  237 MKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 740
            M+++ N+  P  AD++NP+AGR++T+NRFNLPIL+ L+LSAE+G LY  A L PQWN+NAH I+Y+ RG  R+Q+V  NG+ VFD  + +GQL+ VPQ FA +K+AGN G EWISF TN  A  + +AG  S +R LP +V+  S+QVSR++A+R+K+N +    FTP
Sbjct:  333 MRIKENLADPERADIFNPQAGRISTLNRFNLPILQRLELSAERGVLYNRAGLIPQWNVNAHKILYMLRGCARVQVVNHNGDAVFDDNVEQGQLLTVPQNFAFMKQAGNEGAEWISFFTNSEATNTPMAGSVSFMRALPEEVVAASYQVSREDARRIKFNNKNTFFFTP 500          
The following BLAST results are available for this feature:
BLAST of CX047703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
LEGB_GOSHI9.748e-6165.32Legumin B OS=Gossypium hirsutum GN=LEGB PE=2 SV=1[more]
11SB_CUCMA1.969e-5355.4911S globulin subunit beta OS=Cucurbita maxima PE=1... [more]
13SB_FAGES1.667e-5257.4113S globulin basic chain OS=Fagopyrum esculentum P... [more]
13S1_FAGES1.667e-5256.5513S globulin seed storage protein 1 OS=Fagopyrum e... [more]
13S3_FAGES2.843e-5256.5513S globulin seed storage protein 3 OS=Fagopyrum e... [more]
GLUA2_ORYSJ7.002e-5155.62Glutelin type-A 2 OS=Oryza sativa subsp. japonica ... [more]
GLUA1_ORYSJ7.002e-5155.03Glutelin type-A 1 OS=Oryza sativa subsp. japonica ... [more]
13S2_FAGES5.018e-4953.5713S globulin seed storage protein 2 OS=Fagopyrum e... [more]
GLUA3_ORYSJ6.554e-4953.85Glutelin type-A 3 OS=Oryza sativa subsp. japonica ... [more]
LEGA_GOSHI1.460e-4852.38Legumin A OS=Gossypium hirsutum GN=LEGA PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_16A06_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-16A06-A11-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047703 ID=CX047703; Name=CX047703; organism=Citrus sinensis; type=EST; length=740bp
TTTTTTTTTTTTTTTTTATTTGAACAAAGAAATATTACTTTTTATTTTAC
TCGCACATTAAACTTACATACAGTCCCGCAGCATTCATGTCGTTCATGCC
CATTAAGGCTTTTATTCATACATAGTCGTCCCTACCTCAACTACTTACAC
TACACTACATAGCTTACTTCCTGATTACGTACCCATTTACATAATTTCTC
TTAGGCTACGGTTAAGCCCCACTGTGACCTAGGCCCTGGAGTAAACACAG
TCAGCTCCTGCCTGTTGTACTTCAACCTCTGAGCTTCATCCCTCGACACT
TGGAACGAGTTCTGGATAACGTCCAACGGAAGTCCTCTTAACACCGAAGC
CCTTCCGGCCAGCTGGCTTGTCATGGCGACGTCGTTTGTCTTGAATGATA
TCCACTCCAGTCCACGGTTACCTGCCCTCTTCACCACGGCGAAGCCCTGC
GGAACAACGATCAGCTGACCCTCCCGGATTTGACCGTCGAACACATTCTC
CCCGTTCTCCGCTACAATTTGCATCCTGCCGTTGCCCCTTGTTACGTAGA
CTATGCTGTGGGCATTCAAGTTCCACTGTGGCGCCAACAGGGCATTCGGG
TAAAGGTTTCCTTTCTCAGCACTAAGCTGGAGGTCTCGAAGGATAGGAAG
GTTGAATCTGTTCACGGTGGTGACACGTCCGGCCCGGGGGTTGTAGACGT
CAGCATGTGATGGTTTATCGATGTTGTGCCTTAGTTTCAT
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