CX047684

Overview
NameCX047684
Unique NameCX047684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: LEGB_GOSHI (Legumin B OS=Gossypium hirsutum GN=LEGB PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.286e-63
Identity = 117/179 (65.36%), Postives = 145/179 (81.01%), Query Frame = -2
Query:  219 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 755
            EET C+M+L+H     S ADV+NPR GR+TTVN FNLPIL+ LQLSAE+G LY NA+ AP WN+NAHSIVY+TRGNGR+QIV+ENGE +FD Q+  GQ+I VPQ  AVVK+AG RG EWI+FKTN  A  SQ+AGR S++RGLP+DV+ NSF +SR+EA RLK+NRQE++VF+P   SQ
Sbjct:  338 EETFCSMRLKHRTPASS-ADVFNPRGGRITTVNSFNLPILQYLQLSAERGVLYNNAIYAPHWNMNAHSIVYITRGNGRIQIVSENGEAIFDEQVERGQVITVPQNHAVVKKAGRRGFEWIAFKTNANAKISQIAGRVSIMRGLPVDVLANSFGISREEAMRLKHNRQEVSVFSPRQGSQ 515          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: 11SB_CUCMA (11S globulin subunit beta OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.069e-57
Identity = 102/179 (56.98%), Postives = 143/179 (79.89%), Query Frame = -2
Query:  219 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 755
            EETICT++L+ NI +   ADV+NPR GR++T N   LPILR ++LSAE+G LY NA++AP + +N+HS++Y TRGN R+Q+V   G++VFDG++REGQ++++PQ F V+KRA +RG EWI+FKTND A+T+ LAGR S +R LPL V+ N +++SR+EAQRLKY +QE+ V +PG RSQ
Sbjct:  299 EETICTLRLKQNIGRSVRADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVVIKRASDRGFEWIAFKTNDNAITNLLAGRVSQMRMLPLGVLSNMYRISREEAQRLKYGQQEMRVLSPG-RSQ 476          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: 13SB_FAGES (13S globulin basic chain OS=Fagopyrum esculentum PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.872e-55
Identity = 96/168 (57.14%), Postives = 129/168 (76.79%), Query Frame = -2
Query:  252 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQE 755
            +E +CTMKLR NI  P  AD YNP+AGR+TT N   LP LR LQ+SAE+G LY N + AP WN+NAHS +YVTRGN ++Q+V + G  VFD ++++GQLI+VPQ FAV+K+AGN+G E+++FKTND AM + L GR S  R +P +V+++SFQ+S +EA+ LKY RQE
Sbjct:    3 DENVCTMKLRENIKSPQEADFYNPKAGRITTANSQKLPALRSLQMSAERGFLYSNGIYAPHWNINAHSALYVTRGNAKVQVVGDEGNKVFDDEVKQGQLIIVPQYFAVIKKAGNQGFEYVAFKTNDNAMINPLVGRLSAFRAIPEEVLRSSFQISSEEAEELKYGRQE 170          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: 13S1_FAGES (13S globulin seed storage protein 1 OS=Fagopyrum esculentum GN=FA02 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.431e-54
Identity = 97/174 (55.75%), Postives = 131/174 (75.29%), Query Frame = -2
Query:  234 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 755
            E+  C +K + N+++PS ADV+NPRAGR+ TVN  NLPIL  +QLSA+   LY NA+L P+WNLNAHS +YVTRG GR+Q+V + G +VFD  ++ GQ++VVPQGFAVV +AG  GLEW+  K +D A+TS +AG+ SVLR +P++V+ NS+ +S  EA RLK  RQE+ VF P
Sbjct:  380 EQAFCNLKFKQNVNRPSRADVFNPRAGRINTVNSNNLPILEFIQLSAQHVVLYKNAILGPRWNLNAHSALYVTRGEGRVQVVGDEGRSVFDDNVQRGQILVVPQGFAVVLKAGREGLEWVELKNDDNAITSPIAGKTSVLRAIPVEVLANSYDISTKEAFRLKNGRQEVEVFLP 553          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: 13S3_FAGES (13S globulin seed storage protein 3 OS=Fagopyrum esculentum GN=FAGAG1 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.147e-54
Identity = 97/174 (55.75%), Postives = 131/174 (75.29%), Query Frame = -2
Query:  234 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 755
            E+  C +K R N+++PS ADV+NPRAGR+ TV+  NLPIL  +QLSA+   LY NA+L P+WNLNAHS +YVTRG GR+Q+V + G +VFD  ++ GQ++VVPQGFAVV +AG  GLEW+  K +D A+TS +AG+ SVLR +P++V+ NS+ +S  EA RLK  RQE+ VF P
Sbjct:  350 EQAFCNLKFRQNVNRPSRADVFNPRAGRINTVDSNNLPILEFIQLSAQHVVLYKNAILGPRWNLNAHSALYVTRGEGRVQVVGDEGRSVFDDNVQRGQILVVPQGFAVVLKAGREGLEWVELKNDDNAITSPIAGKTSVLRAIPVEVLANSYDISTKEAFRLKNGRQEVEVFRP 523          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: GLUA2_ORYSJ (Glutelin type-A 2 OS=Oryza sativa subsp. japonica GN=GLUA2 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.074e-54
Identity = 98/175 (56.00%), Postives = 134/175 (76.57%), Query Frame = -2
Query:  234 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 755
            +ET CTM++R NID P+ AD YNPRAGRVT +N  N PIL  +Q+SA K NLY NALL+P WN+NAHSIVY+T+G  ++Q+V  NG+ VF+G++R GQL++VPQ + VVK+A   G  +I+FKTN  +M S +AG++S+ R LP DV+ N++++SR+EAQRLK+NR  E   FTP
Sbjct:  309 DETFCTMRVRQNIDNPNRADTYNPRAGRVTNLNSQNFPILNLVQMSAVKVNLYQNALLSPFWNINAHSIVYITQGRAQVQVVNNNGKTVFNGELRRGQLLIVPQHYVVVKKAQREGCAYIAFKTNPNSMVSHIAGKSSIFRALPTDVLANAYRISREEAQRLKHNRGDEFGAFTP 483          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: GLUA1_ORYSJ (Glutelin type-A 1 OS=Oryza sativa subsp. japonica GN=GLUA1 PE=1 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 7.074e-54
Identity = 97/175 (55.43%), Postives = 135/175 (77.14%), Query Frame = -2
Query:  234 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 755
            +ET CT+++R NID P+ AD YNPRAGRVT +N  N PIL  +Q+SA K NLY NALL+P WN+NAHS+VY+T+G  R+Q+V  NG+ VF+G++R GQL+++PQ +AVVK+A   G  +I+FKTN  +M S +AG++S+ R LP DV+ N++++SR+EAQRLK+NR  E   FTP
Sbjct:  309 DETFCTLRVRQNIDNPNRADTYNPRAGRVTNLNTQNFPILSLVQMSAVKVNLYQNALLSPFWNINAHSVVYITQGRARVQVVNNNGKTVFNGELRRGQLLIIPQHYAVVKKAQREGCAYIAFKTNPNSMVSHIAGKSSIFRALPNDVLANAYRISREEAQRLKHNRGDEFGAFTP 483          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: GLUA3_ORYSJ (Glutelin type-A 3 OS=Oryza sativa subsp. japonica GN=GLUA3 PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 6.621e-52
Identity = 95/175 (54.29%), Postives = 132/175 (75.43%), Query Frame = -2
Query:  234 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 755
            +ET CTM++R NID P+ AD YNPRAGR+T +N    PIL  +Q+SA K NLY NALL+P WN+NAHS+VY+T+G  R+Q+V  NG+ VFDG++R GQL+++PQ   V+K+A   G  +I+ KTN  +M S +AG+ S+ R LP DV+ N++++SR+EA+RLK+NR  EL VFTP
Sbjct:  308 DETFCTMRVRQNIDNPNLADTYNPRAGRITYLNGQKFPILNLVQMSAVKVNLYQNALLSPFWNINAHSVVYITQGRARVQVVNNNGKTVFDGELRRGQLLIIPQHHVVIKKAQREGCSYIALKTNPDSMVSHMAGKNSIFRALPDDVVANAYRISREEARRLKHNRGDELGVFTP 482          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: LEGA_GOSHI (Legumin A OS=Gossypium hirsutum GN=LEGA PE=2 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.927e-51
Identity = 92/174 (52.87%), Postives = 129/174 (74.14%), Query Frame = -2
Query:  234 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 755
            EET C+M+++ N+  P  AD++NP+AGR++T+NRFNLPIL+ L+LSAE+G LY  A L PQWN+NAH I+Y+ RG  R+Q+V  NG+ VFD  + +GQL+ VPQ FA +K+AGN G EWISF TN  A  + +AG  S +R LP +V+  S+QVSR++A+R+K+N +    FTP
Sbjct:  327 EETFCSMRIKENLADPERADIFNPQAGRISTLNRFNLPILQRLELSAERGVLYNRAGLIPQWNVNAHKILYMLRGCARVQVVNHNGDAVFDDNVEQGQLLTVPQNFAFMKQAGNEGAEWISFFTNSEATNTPMAGSVSFMRALPEEVVAASYQVSREDARRIKFNNKNTFFFTP 500          
BLAST of CX047684 vs. ExPASy Swiss-Prot
Match: 12S1_ARATH (12S seed storage protein CRA1 OS=Arabidopsis thaliana GN=CRA1 PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 4.292e-51
Identity = 97/179 (54.19%), Postives = 134/179 (74.86%), Query Frame = -2
Query:  222 EETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV-FTPGPRS 755
            EETIC+ +   N+D PS ADVY P+ G ++T+N ++LPILR ++LSA +G++  NA++ PQWN NA++I+YVT G  ++QIV +NG  VFDGQ+ +GQLI VPQGF+VVKRA +   +W+ FKTN  A  + LAGR SVLRGLPL+VI N FQ+S +EA+R+K+N  E T+  + GP S
Sbjct:  285 EETICSARCTDNLDDPSRADVYKPQLGYISTLNSYDLPILRFIRLSALRGSIRQNAMVLPQWNANANAILYVTDGEAQIQIVNDNGNRVFDGQVSQGQLIAVPQGFSVVKRATSNRFQWVEFKTNANAQINTLAGRTSVLRGLPLEVITNGFQISPEEARRVKFNTLETTLTHSSGPAS 463          
The following BLAST results are available for this feature:
BLAST of CX047684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
LEGB_GOSHI1.286e-6365.36Legumin B OS=Gossypium hirsutum GN=LEGB PE=2 SV=1[more]
11SB_CUCMA3.069e-5756.9811S globulin subunit beta OS=Cucurbita maxima PE=1... [more]
13SB_FAGES2.872e-5557.1413S globulin basic chain OS=Fagopyrum esculentum P... [more]
13S1_FAGES2.431e-5455.7513S globulin seed storage protein 1 OS=Fagopyrum e... [more]
13S3_FAGES4.147e-5455.7513S globulin seed storage protein 3 OS=Fagopyrum e... [more]
GLUA2_ORYSJ7.074e-5456.00Glutelin type-A 2 OS=Oryza sativa subsp. japonica ... [more]
GLUA1_ORYSJ7.074e-5455.43Glutelin type-A 1 OS=Oryza sativa subsp. japonica ... [more]
GLUA3_ORYSJ6.621e-5254.29Glutelin type-A 3 OS=Oryza sativa subsp. japonica ... [more]
LEGA_GOSHI1.927e-5152.87Legumin A OS=Gossypium hirsutum GN=LEGA PE=2 SV=2[more]
12S1_ARATH4.292e-5154.1912S seed storage protein CRA1 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15H07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15H07-P14-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047684 ID=CX047684; Name=CX047684; organism=Citrus sinensis; type=EST; length=759bp
TTTTTTTTTTTTTTTTTGCGCAAAGAAATATTATTTTTTTATTTTACTCG
CATCTTAAACTTACATACAGTCCCGCAGCATTCATGTCGTTCATGCCCAT
TAAGGCTTTTATTCATACATAGTCGTCCCTACCTCAACTACTTACACTAC
AATACATAGCTTACTTCCTGATTACGTACCCATTTACATAATTTCTCTTA
GGCTACGGTTAAGCCCCACTGCGACCTAGGCCCTGGAGTAAACACAGTCA
GCTCCTGCCTGTTGTACTTCAACCTCTGAGCTTCATCCCTCGACACTTGG
AACGAGTTCTGGATAACGTCCAACGGAAGCCCTCTTAACACCGAAGCCCT
TCCGGCCAGCTGGCTTGTCATGGCGACGTCGTTTGTCTTGAATGATATCC
ACTCCAGTCCACGGTTACCTGCCCTCTTCACGACGGCGAAGCCCTGCGGA
ACAACGATCAGCTGACCCTCCCGGATTTGACCGTCGAACACATTCTCCCC
GTTCTCCGCTACAATTTGCATCCTGCCGTTGCCCCTTGTTACGTAGACTA
TGCTGTGGGCATTCAAGTTCCACTGTGGCGCCAACAGGGCATTCGGGTAA
AGGTTTCCTTTCTCAGCACTAAGCTGGAGGTCTCGAAGGATAGGAAGGTT
GAATCTGTTGACGGTGGTGACACGTCCGGCCCGGGGGTTGTAGACATCAG
CGTGTGATGGTTTATCGATGTTGTGCCTTAGTTTCATTGTACAGATAGTT
TCCTCGAAG
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