CX047682

Overview
NameCX047682
Unique NameCX047682
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047682 vs. ExPASy Swiss-Prot
Match: USF_AQUPY (Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.837e-20
Identity = 72/242 (29.75%), Postives = 111/242 (45.87%), Query Frame = -1
Query:  115 IQIQRDDTTFDAYVVG-KEDAPGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSG-----LDWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXASGVPYEVHIYPGSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRYLS 807
            ++ +++      Y+   K   PG++V+ EWWG++  + N      +    GF A  PD Y GK   +  +A  LM+      +D   A+    ASV++LK       KKVGVTG+C GG L++  +   P+ +DA V FYG+P     D    K P+     E D FV   +V            +GV  +V +Y G  HAF+N          E   D +DP   + AW+   ++   YL+
Sbjct:    5 VEFEKNGVKVRGYIATPKWGGPGVIVIHEWWGLESPLSNIKEICDRFAQEGFVAFAPDFYEGKYADNPDDAGKLMTDMFENRMDKVDAI--FKASVDFLKECRYTSPKKVGVTGFCCGGTLSMYFAGKFPDLIDASVPFYGLPQITKIDAENIKVPIFFILAEKDEFVNNDEV---IDIAKKVWKNGVDVKVKVYSGVTHAFLN----------EKREDVYDPCRAQDAWNLTVAFFKEYLT 231          
BLAST of CX047682 vs. ExPASy Swiss-Prot
Match: YGHX_ECOLI (Putative uncharacterized protein yghX OS=Escherichia coli (strain K12) GN=yghX PE=5 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 2.328e-17
Identity = 66/215 (30.70%), Postives = 105/215 (48.84%), Query Frame = -1
Query:  115 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGL--DTAEAQHLMSGLDWPGAVKDIHASVNWLKA--NGSKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXASGVPYEVHIYPGSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRYLS 747
            P +VVV E  G++  I++ A ++++   G+ AL PD      G   +  + + L   +D    + D  A++ +++     + KVG+TG+C GG ++ A++V  PE+   V FYG   P  AD  + +AP+  HF ELD  +     +          A+   YE +IYPG  H F N   D   R        +D +A +LAW R   W  +YLS
Sbjct:   82 PAVVVVHENRGLNPYIEDVARRVAKA--GYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTNLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQAP-TADVAKIEAPLLLHFAELDTRIN----EGWPAYEAALKANNKVYEAYIYPGVNHGFHN---DSTPR--------YDKSAADLAWQRTLKWFDKYLS 278          
BLAST of CX047682 vs. ExPASy Swiss-Prot
Match: DLHH_AQUAE (Putative carboxymethylenebutenolidase OS=Aquifex aeolicus GN=aq_1997 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.155e-16
Identity = 67/239 (28.03%), Postives = 107/239 (44.77%), Query Frame = -1
Query:  118 IQIQRDDTTFDAYVVGKEDA-PGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSGL---DWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXASGVPYEVHIYPGSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRYL 807
            ++ +++      Y+   + A P ++V  EWWG++  + N      +L + GF A  PD Y+G+   +  +A  LM+ +         +   ASV ++K       KKVG+TG+C GG LA+  +   PE VDA + FYG+P     +    K P+     E D FV   +V            +GV  +V ++ G  HAF+N          E   D +DP     AW    ++   YL
Sbjct:    5 VEFEKNGVKVRGYIATPKWAGPAVLVFHEWWGLESPLSNIKEICDKLADEGFVAFAPDFYKGQYADNPDDAGKLMTEMFEKRMDEVDRIFQASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAKFPEMVDASLPFYGLPQLTQINAENIKVPIFFILAEKDEFVNNDEV---IDIAKTVWKNGVDVQVKVFSGVTHAFLN----------EKREDVYDPKRACEAWELAVNFFKTYL 230          
The following BLAST results are available for this feature:
BLAST of CX047682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
USF_AQUPY3.837e-2029.75Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1[more]
YGHX_ECOLI2.328e-1730.70Putative uncharacterized protein yghX OS=Escherich... [more]
DLHH_AQUAE1.155e-1628.03Putative carboxymethylenebutenolidase OS=Aquifex a... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_15H05_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15H05-P10-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047682 ID=CX047682; Name=CX047682; organism=Citrus sinensis; type=EST; length=882bp
TTTTTTACTTGCAGCTGTGTTATATGTAGAGTAGAGGCATACACACGGTT
ATTTATTTAATGATGGAAGCGAGGTAAACACCATAGATTCATAATACTAG
TGAATTACTTAAGCAGATAAGTAGCGGGTCATCCATGATTGGAAGCGAGA
CCACGCCAGCTCAACTGCGGCTGGATCGTGATCATCCATTCCCATTTCTT
TCCTCCTCTTCACTCCATCCGGAGAAATGTTCATGAAAGCATGTGCACTG
CCAGGATAAATATGTACCTCATATGGAACACCAGATGCTTTCAGCTTTTC
CTCCAATGCTTTGGCAGTTTTCACATCTGAAAAGCCAACAAAATTGTCAA
GCTCCCCAAAATGAGCTTGAACAGGTGCCTTAGCCTGGGTAGGATCGGCG
AGCTCAGGTGGGGGAACCCCATAAAATGAAACAACAGCATCAACCTCAGG
AACTAAGACAGAACTTGCAATAGCGAGAGCACCTCCCATGCAATATCCAG
TCACGCCAACCTTCTTGGAACCATTTGCCTTAAGCCAATTAACTGAAGCG
TGGATATCCTTGACAGCACCTGGCCAATCAAGACCACTCATCAAGTGCTG
TGCTTCAGCAGTATCCAAACCAACCTTTCCCCGATATAAATCTGGTATAA
GTGCCTTGAATCCAGGGTTTAGTTGGGAGATTTTGACAGCATGGTTCTTG
ATCTCAAAATCAACACCCCACCACTCCTGAACTACAACAATCCCAGGGGC
GTCTTCTTTGCCAACCACATATGCATCAAAAGTAGTATCATCTCTCTGAA
TCTGGATTTTCTTGAAGGGCGAAGCTGCAGAGTCTGCCATTGATCTGACT
GCAAAGCGATAACCGGCGGGAAAGTGAGTCCT
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