CX047679
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047679 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.045e-18 Identity = 49/160 (30.63%), Postives = 94/160 (58.75%), Query Frame = -3 Query: 268 NNFVRDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKLKRRNLMRGRNRLALLDCIECFQETIDELHMSLGILRRLS---AREFDRQMDDLTTFVSAALTYEDTCLDGF--EGQKATQVDLLKKRVLKTTYLASNALALIN 732 N F++ +C++TTY +C SL+ ++K+ +N+P + A + V++ + F+ +L + ++ R A+ DC+E ++++D + S ++ LS +F +M ++ T+VSAALT E TC+DGF +G + ++ +V+ + SNALAL+N Sbjct: 26 NQFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVN 185
BLAST of CX047679 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.844e-15 Identity = 52/168 (30.95%), Postives = 89/168 (52.98%), Query Frame = -3 Query: 271 SGESASGNRNNFVRDACSVTTYRDLCIHSLAPFSKSARN--SPGKWARAGVSVTIGEVKNVTQFLYKLKRRNLMRGRNRLALLDCIECFQETIDELHMSLGILRRL-SAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQ--VDLLKKRVLKTTYLASNALALI 759 SG++ + + ++ +CS T Y DLC ++A ++++ S +++T V++ + KL +R + R ++AL DC+E ET+DELH ++ L + + + DDL T +SAA+T + TCLDGF A + D L + + SNALA+I Sbjct: 57 SGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224
BLAST of CX047679 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.844e-15 Identity = 52/168 (30.95%), Postives = 89/168 (52.98%), Query Frame = -3 Query: 271 SGESASGNRNNFVRDACSVTTYRDLCIHSLAPFSKSARN--SPGKWARAGVSVTIGEVKNVTQFLYKLKRRNLMRGRNRLALLDCIECFQETIDELHMSLGILRRL-SAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQ--VDLLKKRVLKTTYLASNALALI 759 SG++ + + ++ +CS T Y DLC ++A ++++ S +++T V++ + KL +R + R ++AL DC+E ET+DELH ++ L + + + DDL T +SAA+T + TCLDGF A + D L + + SNALA+I Sbjct: 57 SGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224
BLAST of CX047679 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.039e-14 Identity = 56/170 (32.94%), Postives = 91/170 (53.53%), Query Frame = -3 Query: 271 AKSGESASGNRNNFVRDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKL-KRRNLMRGRNRLALLDCIECFQETIDELHMSLGILRRLSAREFDRQ-MDDLTTFVSAALTYEDTCLDGF---EGQKATQVDLLKKRVLKTTYLASNALALI 765 A + S + + +R +CS T Y +LCI ++ S A V++TI V++ + KL K+R + R + AL DC+E ET+DELH ++ L ++ R+ DL T +S+A+T ++TCLDGF + K + LLK ++ ++ SNALA+I Sbjct: 45 ANEKRTLSPSSHAVLRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQI-HVEHMCSNALAMI 213
BLAST of CX047679 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.254e-13 Identity = 52/163 (31.90%), Postives = 85/163 (52.15%), Query Frame = -3 Query: 271 SGNRNNFVRDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNVTQFLYKL-KRRNLMRGRNRLALLDCIECFQETIDELHMSLGILRRL-SAREFDRQMDDLTTFVSAALTYEDTCLDGF---EGQKATQVDLLKKRVLKTTYLASNALALI 744 S + ++ CS T Y +LC ++A S + A +++T VK+ + KL +R + R AL DC+E ET+DELH+++ L + + + DDL T +S+A+T + TCLDGF + + + LLK +V ++ SNALA+I Sbjct: 55 SSTSHAILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQV-HVEHMCSNALAMI 216
BLAST of CX047679 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.565e-13 Identity = 57/168 (33.93%), Postives = 90/168 (53.57%), Query Frame = -3 Query: 271 SGNRNNFVRDACSVTTYRDLC---IHSLAPFSKSARNSPGKWARAGVSVTIGEVK-NVTQFLYKLKRRNLMRGRNRLALLDCIECFQETIDELHMSLGILRRL-SAREFDRQMDDLTTFVSAALTYEDTCLDGF---EGQKATQVDLLK--KRVLKTTYLASNALALI 744 S + + V+ ACS T + +LC I +++ FSK S +++T+ V+ N +K R + R ++AL DC+E ET+DELH ++ L + + ++DL T +S+A+T ++TCLDGF E K + LLK K V K + SNALA+I Sbjct: 59 SSSAHAIVKSACSNTLHPELCYSAIVNVSDFSKKV-TSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEK---MCSNALAMI 222
BLAST of CX047679 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.237e-11 Identity = 44/156 (28.21%), Postives = 82/156 (52.56%), Query Frame = -3 Query: 265 VRDACSVTTYRDLCIHSLAPFSKSARNSPGKWARAGVSVTIGEVKNV---TQFLYKLKRRNLMRGRNRLALLDCIECFQETIDELHMSLGILRRLSAREFDRQMDDLTTFVSAALTYEDTCLDGFEGQKATQVDLLKKRVLKTTYLASNALALINK 723 V+D C+ T YR C +L K+ + P + + +VT+ ++ + +Q + +L++ + R R+AL C E +DEL S L + D + +L ++SAA+++E+TCL+GF+G + + +KK + L N LA+I++ Sbjct: 58 VKDVCAPTDYRKTCEDTLIKNGKNTTD-PMELVKTAFNVTMKQITDAAKKSQTIMELQKDS----RTRMALDQCKELMDYALDELSNSFEELGKFEFHLLDEALINLRIWLSAAISHEETCLEGFQGTQGNAGETMKKALKTAIELTHNGLAIISE 208 The following BLAST results are available for this feature:
BLAST of CX047679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047679 ID=CX047679; Name=CX047679; organism=Citrus sinensis; type=EST; length=797bpback to top |