CX047672

Overview
NameCX047672
Unique NameCX047672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CKB11_ARATH (Cyclin-dependent kinase B1-1 OS=Arabidopsis thaliana GN=CDKB1-1 PE=1 SV=2)

HSP 1 Score: 382.489 bits (981), Expect = 1.825e-105
Identity = 180/217 (82.95%), Postives = 194/217 (89.40%), Query Frame = -2
Query:  261 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLDKSQY 911
            YLDTDLKKFIDS+RKGPNP+PL P LIQ  ++QLCKGVAHCHSHGVLHRDLKPQN              LGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYST VDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFR+LGTPTE+QWPGVSTLRDWHVYP+WEPQ+L  AVPSLSP+GVDLL+ MLKYNPA+RISAK A++HPYFDSLDKSQ+
Sbjct:   93 YLDTDLKKFIDSYRKGPNPKPLEPFLIQKLMFQLCKGVAHCHSHGVLHRDLKPQNLLLVKDKELLKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTGVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVSTLRDWHVYPKWEPQDLTLAVPSLSPQGVDLLTKMLKYNPAERISAKTALDHPYFDSLDKSQF 309          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CKB12_ARATH (Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2)

HSP 1 Score: 375.555 bits (963), Expect = 2.231e-103
Identity = 176/217 (81.11%), Postives = 193/217 (88.94%), Query Frame = -2
Query:  261 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLDKSQY 911
            YLDTDLKKFIDSHRKG NPRPL  +L+Q F++QL KGVAHCHSHGVLHRDLKPQN              LGL RAFTVPLK+YTHEIVTLWYRAPEVLLGSTHYSTAVD+WSVGCIFAEM+RRQALFPGDSEFQQLLHIFR+LGTPTE+QWPGV  LRDWHVYP+WEPQ+L RAVPSLSPEG+DLL+ MLKYNPA+RISAKAA++HPYFDSLDKSQ+
Sbjct:   95 YLDTDLKKFIDSHRKGSNPRPLEASLVQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWHVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSLDKSQF 311          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CKB11_ORYSJ (Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 1.107e-102
Identity = 175/217 (80.65%), Postives = 191/217 (88.02%), Query Frame = -2
Query:  261 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLDKSQY 911
            +LDTDLKKF+D++RKGPNPRPLP  +I+SFLYQLCKGVAHCH HGVLHRDLKPQN              LGLGRAFTVP+KSYTHEIVTLWYRAPEVLLGSTHYST VD+WSVGCIFAEMVRRQALFPGDSE QQLLHIFR+LGTPTE+QWPGV+ LRDWH +PQW+PQ L R VPSL PEGVDLLS ML+YNPA+RISAKAAMEHPYFDSLDKSQ+
Sbjct:   87 FLDTDLKKFVDAYRKGPNPRPLPTNVIKSFLYQLCKGVAHCHGHGVLHRDLKPQNLLVDKEKGILKIADLGLGRAFTVPMKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSVGCIFAEMVRRQALFPGDSELQQLLHIFRLLGTPTEEQWPGVTDLRDWHEFPQWKPQILERQVPSLEPEGVDLLSKMLQYNPANRISAKAAMEHPYFDSLDKSQF 303          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2C_ANTMA (Cell division control protein 2 homolog C OS=Antirrhinum majus GN=CDC2C PE=2 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 3.562e-101
Identity = 175/217 (80.65%), Postives = 192/217 (88.48%), Query Frame = -2
Query:  261 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLDKSQY 911
            YLDTDLKKFIDSHRKGPNPRPLPP  IQSFL+QLCKGV+HCH+HGVLHRDLKPQN              LGL RAFTVPLKSYTHEIVTL YRAPEVLLGS+HYSTAVDM SVGCIFAEMVRRQALFPGDSEFQQLLHIFR+LGTP+++QWPGVS+LRDWHVYPQWEPQN   AVPSL P+G+DLL+  LKY+PADRISAKAA++HPYFD+LDKSQ+
Sbjct:   89 YLDTDLKKFIDSHRKGPNPRPLPPQQIQSFLFQLCKGVSHCHAHGVLHRDLKPQNLLLDKDKGVLKIADLGLARAFTVPLKSYTHEIVTLSYRAPEVLLGSSHYSTAVDMSSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPSDEQWPGVSSLRDWHVYPQWEPQNSAPAVPSLGPDGLDLLTKTLKYDPADRISAKAALDHPYFDTLDKSQF 305          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CKB21_ARATH (Cyclin-dependent kinase B2-1 OS=Arabidopsis thaliana GN=CDKB2-1 PE=1 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 5.005e-79
Identity = 139/212 (65.57%), Postives = 161/212 (75.94%), Query Frame = -2
Query:  276 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSL 911
            Y+DTD+KKFI S R     + +P   I+S +YQLCKG+A CH HG+LHRDLKP N              LGL RAFT+P+K YTHEI+TLWYRAPEVLLG+THYSTAVDMWSVGCIFAE+V  QA+F GDSE QQLLHIF++ GTP E+ WPGVSTL++WH YPQW+P  L  AVP+L   GVDLLS ML+Y PA RISAK AMEHPYFD L
Sbjct:   98 YMDTDVKKFIRSFRS--TGKNIPTQTIKSLMYQLCKGMAFCHGHGILHRDLKPHNLLMDPKTMRLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYSTAVDMWSVGCIFAELVTNQAIFQGDSELQQLLHIFKLFGTPNEEMWPGVSTLKNWHEYPQWKPSTLSSAVPNLDEAGVDLLSKMLQYEPAKRISAKMAMEHPYFDDL 307          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CKB22_ARATH (Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana GN=CDKB2-2 PE=1 SV=2)

HSP 1 Score: 291.582 bits (745), Expect = 4.237e-78
Identity = 143/217 (65.90%), Postives = 165/217 (76.04%), Query Frame = -2
Query:  267 YLDTDLKKFIDSHRK-GPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSL-DKS 911
            Y+DTDLKKFI S R+ G N   +P   ++  +YQLCKG+A CH HGVLHRDLKP N              LGL RAFT+P+K YTHEI+TLWYRAPEVLLG+THYST VDMWSVGCIFAE+V +QA+F GDSE QQLL IFR+LGTP E+ WPGVS L+DWH YPQW+P +L  AVP+L   G+DLLS ML+Y PA RISAK AMEHPYFD L DKS
Sbjct:  100 YVDTDLKKFIRSFRQAGQN---IPQNTVKCLMYQLCKGMAFCHGHGVLHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYSTGVDMWSVGCIFAELVTKQAIFAGDSELQQLLRIFRLLGTPNEEVWPGVSKLKDWHEYPQWKPLSLSTAVPNLDEAGLDLLSKMLEYEPAKRISAKKAMEHPYFDDLPDKS 313          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2D_ANTMA (Cell division control protein 2 homolog D OS=Antirrhinum majus GN=CDC2D PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 2.103e-77
Identity = 139/215 (64.65%), Postives = 162/215 (75.35%), Query Frame = -2
Query:  267 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLDKS 911
            Y+DTDLKK+I S ++      + P  ++S +YQLCKGVA CH HGVLHRDLKP N              LGL RA+T+P+K YTHEI+TLWYRAPEVLLG+THYS AVDMWSV CIFAE+V ++ALFPGDSE QQLLHIFR+LGTP E+ WPGVSTL DWH YPQW  Q +  AVP L  +G++LLS ML Y P+ RISAK AMEHPYFD LDKS
Sbjct:   98 YMDTDLKKYIRSFKQ--TGESIAPMNVKSLMYQLCKGVAFCHGHGVLHRDLKPHNLLMDRKTMMLKIADLGLARAYTLPIKKYTHEILTLWYRAPEVLLGATHYSPAVDMWSVACIFAELVTQKALFPGDSELQQLLHIFRLLGTPNEEIWPGVSTLVDWHEYPQWTAQPISSAVPGLDEKGLNLLSEMLHYEPSRRISAKKAMEHPYFDELDKS 310          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.194e-72
Identity = 130/217 (59.91%), Postives = 155/217 (71.43%), Query Frame = -2
Query:  261 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLDKSQY 911
            Y+DTDLKKFI +HR+  N + +P   ++  +YQLCKGVA CH  GVLHRDLKP N              LGL R+FTVPLK YTHEI+TLWYRAPEVLLG+ HYST VD+WSVGCIFAE+   Q LF GDSE QQLLHIF++LGTP E+ WPGVS L +WH YPQW P  +   V  L  + +DLL  ML+Y P+ RISAK AMEHPYF+ ++K  Y
Sbjct:  112 YMDTDLKKFIRAHRQ--NLQKIPVPTVKILMYQLCKGVAFCHGRGVLHRDLKPHNLLMDRKTMALKIADLGLSRSFTVPLKKYTHEILTLWYRAPEVLLGAAHYSTPVDIWSVGCIFAELATNQPLFAGDSEVQQLLHIFKLLGTPNEQVWPGVSKLPNWHEYPQWNPSKVSDLVHGLDADALDLLEKMLQYEPSKRISAKKAMEHPYFNDVNKELY 326          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDKA1_ORYSJ (Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 4.395e-67
Identity = 124/217 (57.14%), Postives = 156/217 (71.89%), Query Frame = -2
Query:  264 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDW-HVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLDKSQ 911
            YLD DLKKF+DS  +        PTLI+S+LYQ+ +GVA+CHSH VLHRDLKPQN               GL RAF +P++++THE+VTLWYRAPE+LLGS  YST VDMWSVGCIFAEMV ++ LFPGDSE  +L  IFR+LGTP E+ WPGVS+L D+   +P+W+ Q+L   VP+L P G+DLLS ML+Y P  RI+A+ A+EH YF  L+  Q
Sbjct:   82 YLDLDLKKFMDSCPEFAKN----PTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRQYSTPVDMWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRVLGTPNEQSWPGVSSLPDYKSAFPKWQAQDLATIVPTLDPAGLDLLSKMLRYEPNKRITARQALEHEYFKDLEMVQ 294          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDC2_MAIZE (Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 6.346e-66
Identity = 122/217 (56.22%), Postives = 155/217 (71.43%), Query Frame = -2
Query:  264 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWH-VYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSLDKSQ 911
            YLD DLKKF+DS  +        PTLI+S+LYQ+  GVA+CHSH VLHRDLKPQN               GL RAF +P++++THE+VTLWYRAPE+LLG+  YST VD+WSVGCIFAEMV ++ LFPGDSE  +L  IFR+LGTP E+ WPGVS L D+   +P+W+ Q+L   VP+L P G+DLLS ML+Y P+ RI+A+ A+EH YF  L+  Q
Sbjct:   82 YLDLDLKKFMDSCPEFAKN----PTLIKSYLYQILHGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQSWPGVSCLPDFKTAFPRWQAQDLATVVPNLDPAGLDLLSKMLRYEPSKRITARQALEHEYFKDLEVVQ 294          
The following BLAST results are available for this feature:
BLAST of CX047672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CKB11_ARATH1.825e-10582.95Cyclin-dependent kinase B1-1 OS=Arabidopsis thalia... [more]
CKB12_ARATH2.231e-10381.11Cyclin-dependent kinase B1-2 OS=Arabidopsis thalia... [more]
CKB11_ORYSJ1.107e-10280.65Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp... [more]
CDC2C_ANTMA3.562e-10180.65Cell division control protein 2 homolog C OS=Antir... [more]
CKB21_ARATH5.005e-7965.57Cyclin-dependent kinase B2-1 OS=Arabidopsis thalia... [more]
CKB22_ARATH4.237e-7865.90Cyclin-dependent kinase B2-2 OS=Arabidopsis thalia... [more]
CDC2D_ANTMA2.103e-7764.65Cell division control protein 2 homolog D OS=Antir... [more]
CKB21_ORYSJ1.194e-7259.91Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp... [more]
CDKA1_ORYSJ4.395e-6757.14Cyclin-dependent kinase A-1 OS=Oryza sativa subsp.... [more]
CDC2_MAIZE6.346e-6656.22Cell division control protein 2 homolog OS=Zea may... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15G11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15G11-N22-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047672 ID=CX047672; Name=CX047672; organism=Citrus sinensis; type=EST; length=912bp
AATGACATAAAAGAAAGATTGTAGAAATTGAAAACGATCATATTACAAAG
TTCAGAACTTCAGATGGTGAAATCACCAAGATGATGACAACTAACATGAC
ATACGGACTTGACAGAATTATGTTTAAGAGTTTAAAACAAGTCACCCCTT
CTATAACTTCAATACAAGAAAATGAATTCCTACAACAAACTGTATCACAA
CCGAAGAACTGAAGAAAGAGAAGTAGAATTTCACATAAGCAGCAGGGTAC
TGCAACTTCAGTATTGAGACTTGTCAAGGCTGTCAAAATAGGGATGTTCC
ATAGCTGCTTTCGCTGAAATTCTGTCTGCTGGATTGTATTTCAGCATTAA
CGACAGAAGATCAACTCCCTCAGGACTCAGAGATGGAACAGCACGTGGCA
AGTTCTGCGGCTCCCACTGTGGATACACATGCCAGTCCCTCAGAGTAGAA
ACACCTGGCCACTGTTTCTCAGTTGGTGTTCCCAGCATCCTGAAAATATG
AAGCAATTGCTGGAACTCAGAGTCACCAGGGAACAAAGCCTGCCTTCTAA
CCATCTCAGCGAAAATGCAACCAACGGACCACATGTCGACAGCAGTGGAG
TAATGAGTGGAACCAAGAAGCACCTCGGGAGCCCTATACCAGAGAGTAAC
AATCTCGTGGGTATAGCTTTTGAGAGGAACGGTGAAGGCGCGTCCGAGGC
CAAGATCGGCGATCTTGAGAATCCCCTTGTCCTTATCAAGGAGAAGATTC
TGCGGCTTCAGGTCGCGATGAAGGACACCGTGGCTGTGGCAGTGGGCGAC
GCCTTTGCAAAGCTGGTACAAGAAGCTCTGAATGAGAGTGGGGGGCAGCG
GCCTCGGATTGGGGCCCTTGCGGTGCGAGTCGATGAATTTCTTTAGATCG
GTATCGAGGTAT
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