CX047665

Overview
NameCX047665
Unique NameCX047665
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047665 vs. ExPASy Swiss-Prot
Match: ERD21_MOUSE (ER lumen protein retaining receptor 1 OS=Mus musculus GN=Kdelr1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.644e-16
Identity = 52/132 (39.39%), Postives = 74/132 (56.06%), Query Frame = 3
Query:   18 DNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLL 413
            D F + ++ VP+AILAF+V   N       ILW F +Y+ESV++LPQL ++      E  TSHY+FALGV R L   +WI        RY F    G+    +A +A ++QT +  DF Y YI  + +G+ L
Sbjct:   91 DTFRVEFLVVPTAILAFLV---NHDFTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWI-------WRYHF---EGFFDL-IAIVAGLVQTVLYCDFFYLYITKVLKGKKL 208          
BLAST of CX047665 vs. ExPASy Swiss-Prot
Match: ERD21_HUMAN (ER lumen protein retaining receptor 1 OS=Homo sapiens GN=KDELR1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.644e-16
Identity = 52/132 (39.39%), Postives = 74/132 (56.06%), Query Frame = 3
Query:   18 DNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLL 413
            D F + ++ VP+AILAF+V   N       ILW F +Y+ESV++LPQL ++      E  TSHY+FALGV R L   +WI        RY F    G+    +A +A ++QT +  DF Y YI  + +G+ L
Sbjct:   91 DTFRVEFLVVPTAILAFLV---NHDFTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWI-------WRYHF---EGFFDL-IAIVAGLVQTVLYCDFFYLYITKVLKGKKL 208          
BLAST of CX047665 vs. ExPASy Swiss-Prot
Match: ERD21_XENTR (ER lumen protein retaining receptor 1 OS=Xenopus tropicalis GN=kdelr1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.065e-16
Identity = 51/132 (38.64%), Postives = 74/132 (56.06%), Query Frame = 3
Query:   18 DNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLL 413
            D F + ++ VP+AILAF+V   N       ILW F +Y+ESV++LPQL ++      E  TSHY+FALG+ R L   +WI        RY F    G+    +A +A ++QT +  DF Y YI  + +G+ L
Sbjct:   91 DTFRVEFLIVPTAILAFLV---NHDFTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGIYRALYLFNWI-------WRYQF---EGFFDL-IAIVAGLVQTVLYCDFFYLYITKVLKGKKL 208          
BLAST of CX047665 vs. ExPASy Swiss-Prot
Match: ERD21_RAT (ER lumen protein retaining receptor 1 OS=Rattus norvegicus GN=Kdelr1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.065e-16
Identity = 51/132 (38.64%), Postives = 74/132 (56.06%), Query Frame = 3
Query:   18 DNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLL 413
            D F + ++ VP+A+LAF+V   N       ILW F +Y+ESV++LPQL ++      E  TSHY+FALGV R L   +WI        RY F    G+    +A +A ++QT +  DF Y YI  + +G+ L
Sbjct:   91 DTFRVEFLVVPTAVLAFLV---NHDFTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWI-------WRYHF---EGFFDL-IAIVAGLVQTVLYCDFFYLYITKVLKGKKL 208          
BLAST of CX047665 vs. ExPASy Swiss-Prot
Match: ERD21_BOVIN (ER lumen protein retaining receptor 1 OS=Bos taurus GN=KDELR1 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.065e-16
Identity = 51/132 (38.64%), Postives = 74/132 (56.06%), Query Frame = 3
Query:   18 DNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLL 413
            D F + ++ +P+AILAF+V   N       ILW F +Y+ESV++LPQL ++      E  TSHY+FALGV R L   +WI        RY F    G+    +A +A ++QT +  DF Y YI  + +G+ L
Sbjct:   91 DTFRVEFLVIPTAILAFLV---NHDFTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWI-------WRYHF---EGFFDL-IAIVAGLVQTVLYCDFFYLYITKVLKGKKL 208          
BLAST of CX047665 vs. ExPASy Swiss-Prot
Match: ERD22_CAEEL (Putative ER lumen protein retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.351e-15
Identity = 47/142 (33.10%), Postives = 77/142 (54.23%), Query Frame = 3
Query:    3 YIKELDNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLLMRMPI 428
            Y++E D F +  + VP+AILA +++       L   LW F +Y+E+V++LPQL L+Q+    E  T+HY+FALG  R L   +WI +                 + P+  +A ++QT + ADF Y Y+  + + +  M +PI
Sbjct:   86 YMRESDTFRVELLIVPAAILALLINHDFAPFEL---LWTFSIYLEAVAILPQLFLLQSTGSAEVITAHYLFALGSYRALYIFNWIYRYYTED-----------YFDPIVVVAGIVQTVLYADFFYLYVTRVVQTRKGMELPI 213          
BLAST of CX047665 vs. ExPASy Swiss-Prot
Match: ERD2_ENTHI (ER lumen protein retaining receptor OS=Entamoeba histolytica GN=ERD2 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.765e-15
Identity = 44/134 (32.84%), Postives = 72/134 (53.73%), Query Frame = 3
Query:    3 YIKELDNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEG 404
            Y K  D   ++Y+ VP  +LAFI        +++ I W F +++E+V++LPQ+ L+++   +E   S Y+F LG+ R L   +WI         Y +     Y W P+ ++   IQT +  ++ YYYIKS  EG
Sbjct:   88 YDKIHDTLNVWYLIVPCIVLAFIFTED---YSITEICWTFSIFLEAVAILPQILLLRSTGEVENLNSQYIFCLGLYRALYIINWI---------YRYATEQSY-WSPLTWICGSIQTLLYVEYFYYYIKSRVEG 208          
BLAST of CX047665 vs. ExPASy Swiss-Prot
Match: ER21A_XENLA (ER lumen protein retaining receptor 1-A OS=Xenopus laevis GN=kdelr1-A PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.305e-15
Identity = 49/132 (37.12%), Postives = 73/132 (55.30%), Query Frame = 3
Query:   18 DNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLL 413
            D F + ++ VP+AILAF+V   N       I W F +Y+ESV++LPQL ++      E  TSHY+FALG+ R L   +WI        RY F    G+    +A +A ++QT +  DF Y Y+  + +G+ L
Sbjct:   91 DTFRVEFLIVPTAILAFLV---NHDFTPLEIFWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGIYRTLYLFNWI-------WRYQF---EGFFDL-IAIVAGLVQTVLYCDFFYLYVTKVLKGKKL 208          
BLAST of CX047665 vs. ExPASy Swiss-Prot
Match: ER21B_XENLA (ER lumen protein retaining receptor 1-B OS=Xenopus laevis GN=kdelr1-B PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.010e-15
Identity = 49/132 (37.12%), Postives = 73/132 (55.30%), Query Frame = 3
Query:   18 DNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLL 413
            D F + ++ VP+AIL+F+V   N       ILW F +Y+ESV++LPQL ++      E  TSHY+FALG+ R L   +WI        RY F       +  +A +A ++QT +  DF Y YI  + +G+ L
Sbjct:   91 DTFRVEFLIVPTAILSFLV---NHDFTPLEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGIYRTLYLFNWI-------WRYQF----EEFFDLIAIVAGLVQTVLYCDFFYLYITKVLKGKKL 208          
BLAST of CX047665 vs. ExPASy Swiss-Prot
Match: ERD2_PETHY (ER lumen protein retaining receptor OS=Petunia hybrida GN=ERD2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.931e-15
Identity = 45/137 (32.85%), Postives = 71/137 (51.82%), Query Frame = 3
Query:    3 YIKELDNFPIYYIAVPSAILAFIVHPSNRLINLSGILWAFCVYVESVSVLPQLRLMQNAKMIEPFTSHYVFALGVARFLSFAHWILQLIETRGRYLFLLGHGYLWFPVAFLAEMIQTFILADFCYYYIKSLKEGQLL 413
            Y K+ D F   ++ +P  +LA ++   N       ++W F +Y+E+V++LPQL L+Q  + I+  T  Y+F LG  R     +W+        RY F   H   W  + ++A +IQT + ADF YYY +S K    L
Sbjct:   88 YDKDQDTFRHLFLVLPCLLLALVI---NEKFTFKEVMWTFSIYLEAVAILPQLVLLQRTRNIDNLTGQYIFLLGAYRSFYILNWVY-------RY-FTEPHFVHW--ITWIAGLIQTLLYADFFYYYFQSWKNNTKL 211          
The following BLAST results are available for this feature:
BLAST of CX047665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
ERD21_MOUSE4.644e-1639.39ER lumen protein retaining receptor 1 OS=Mus muscu... [more]
ERD21_HUMAN4.644e-1639.39ER lumen protein retaining receptor 1 OS=Homo sapi... [more]
ERD21_XENTR6.065e-1638.64ER lumen protein retaining receptor 1 OS=Xenopus t... [more]
ERD21_RAT6.065e-1638.64ER lumen protein retaining receptor 1 OS=Rattus no... [more]
ERD21_BOVIN6.065e-1638.64ER lumen protein retaining receptor 1 OS=Bos tauru... [more]
ERD22_CAEEL1.351e-1533.10Putative ER lumen protein retaining receptor C28H8... [more]
ERD2_ENTHI1.765e-1532.84ER lumen protein retaining receptor OS=Entamoeba h... [more]
ER21A_XENLA2.305e-1537.12ER lumen protein retaining receptor 1-A OS=Xenopus... [more]
ER21B_XENLA3.010e-1537.12ER lumen protein retaining receptor 1-B OS=Xenopus... [more]
ERD2_PETHY3.931e-1532.85ER lumen protein retaining receptor OS=Petunia hyb... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15G04_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15G04-N8-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047665 ID=CX047665; Name=CX047665; organism=Citrus sinensis; type=EST; length=668bp
CCTACATCAAGGAGCTAGATAACTTTCCTATATACTACATAGCGGTGCCT
AGTGCTATCCTTGCTTTCATAGTCCACCCTTCTAATCGACTCATAAACTT
GAGCGGGATCCTGTGGGCATTTTGTGTGTACGTAGAATCTGTTTCAGTGC
TGCCTCAACTTCGGCTGATGCAGAATGCTAAAATGATTGAACCATTTACA
TCCCATTATGTATTTGCCTTGGGCGTTGCTCGATTCTTGTCCTTTGCTCA
TTGGATTTTGCAGCTTATTGAGACAAGAGGGAGGTATCTATTTTTACTTG
GTCATGGATACCTCTGGTTTCCAGTGGCTTTTCTTGCGGAAATGATTCAG
ACATTCATCTTGGCTGACTTTTGTTACTATTACATCAAAAGTTTAAAGGA
AGGCCAACTTCTCATGCGGATGCCCATTTAAATTTTTGATTTTCCGTTTC
TTGAGAAGGTAACTAAAATGCAGTGATGTACCATTAGATCACTTGTTTTC
ATTTCGTCCTAATTTTGCAGTTTAAATTTTAATGGTGCTTGTGCTTCTGG
CTTTATAAACGGTCTTGGTTACATTAGAAAAGCAGATGACCATCTTTTCA
TGTCTCATGAGGATTGAATGAACGATTAATTTATATCCACAAAACCTTTG
ACAAAAAAAAAAAAAAAA
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