CX047662

Overview
NameCX047662
Unique NameCX047662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047662 vs. ExPASy Swiss-Prot
Match: MCFW_DICDI (Mitochondrial substrate carrier family protein W OS=Dictyostelium discoideum GN=mcfW PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.201e-37
Identity = 77/171 (45.03%), Postives = 111/171 (64.91%), Query Frame = -3
Query:  330 NPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQRFL 842
            +P+W++KTR  TQ M      Y+ I+ ++  I HEEG RGLY G+ PSL GV HV +QFP YE+ K  + +K+     +L    +MIASS++K++ASV+ YPHEV+R+R Q+   +         ++   K++ ++EG+ G YRG   NLLR TPS VITFTSYE I++FL
Sbjct:  154 SPIWLIKTRFITQEMVGRQKKYRGIVHSMVSIYHEEGFRGLYKGLGPSLLGVLHVGVQFPLYEKFKSILKEKNKNK--ELGIVEIMIASSVSKIIASVVAYPHEVLRARSQDSSPDSPNRTYRGNIIQMFKQIVREEGWRGLYRGMGVNLLRVTPSCVITFTSYEYIKKFL 322          
BLAST of CX047662 vs. ExPASy Swiss-Prot
Match: YEA6_YEAST (Probable mitochondrial carrier YEL006W OS=Saccharomyces cerevisiae GN=YEL006W PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.679e-31
Identity = 72/176 (40.91%), Postives = 113/176 (64.20%), Query Frame = -3
Query:  330 NPLWVVKTRLQTQ-GMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIK---HYMAKKD-DTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQRFL 842
            NP+WVVKTRL  Q G+      YK  +   R+I  +EG + LY+G++P+L G+ +VAIQFP YE +K    Y    D  TDV   N   +++AS ++K++AS +TYPHE++R+R+Q +        ++  ++  +K  +++EGF GFY G ATNL+RT P+AV+T  S+E  +++L
Sbjct:  157 NPIWVVKTRLMLQTGIGKYSTHYKGTIDTFRKIIQQEGAKALYAGLVPALLGMLNVAIQFPLYENLKIRFGYSESTDVSTDVTSSNFQKLILASMLSKMVASTVTYPHEILRTRMQLKSDLPNTVQRH--LLPLIKITYRQEGFAGFYSGFATNLVRTVPAAVVTLVSFEYSKKYL 330          

HSP 2 Score: 69.3218 bits (168), Expect = 3.292e-11
Identity = 53/169 (31.36%), Postives = 78/169 (46.15%), Query Frame = -3
Query:  348 PLWVVKTRLQTQGMRSNVVP---YKSILSALRRISHEEGMRGLYSGILPSLAG-VSHVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSI-AKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYE 839
            P  V KTRLQ QG+++       YK        I  +EG  GLY G+ P++ G +  + I F  Y+  + Y       D+   +P     +S+I A  +++V T P  VV++RL  Q    K    Y G +D  +K+ Q+EG    Y G    LL    +  I F  YE
Sbjct:   58 PFDVAKTRLQAQGLQNMTHQSQHYKGFFGTFATIFKDEGAAGLYKGLQPTVLGYIPTLMIYFSVYDFCRKY-----SVDIFPHSPFLSNASSAITAGAISTVATNPIWVVKTRLMLQTGIGKYSTHYKGTIDTFRKIIQQEGAKALYAGLVPALLGML-NVAIQFPLYE 220          
BLAST of CX047662 vs. ExPASy Swiss-Prot
Match: MFTC_MOUSE (Mitochondrial folate transporter/carrier OS=Mus musculus GN=Slc25a32 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.856e-30
Identity = 76/175 (43.43%), Postives = 104/175 (59.43%), Query Frame = -3
Query:  330 NPLWVVKTRLQTQ--GMRS-NVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIK-HYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQRFL 842
            NPLWV KTRL  Q  G+ S +   YK +  AL +I   EG+RGLY G +P L G SH A+QF AYE +K  Y    +     +L+    +  ++++K+ A   TYP++VVR+RLQ+Q       V Y GV D + K ++KEG  GFY+G A NL+R TP+  ITF  YE +  FL
Sbjct:  139 NPLWVTKTRLMLQYGGVASPSQRQYKGMFDALVKIYKYEGVRGLYKGFVPGLFGTSHGALQFMAYELLKLKYNKHINRLPEAQLSTAEYISVAALSKIFAVAATYPYQVVRARLQDQ------HVSYGGVTDVITKTWRKEGIGGFYKGIAPNLIRVTPACCITFVVYENVSHFL 307          

HSP 2 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 53/172 (30.81%), Postives = 86/172 (50.00%), Query Frame = -3
Query:  339 NPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSL--AGVSHVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQ--GQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQ 842
            +PL +VK R            YK IL  L  I   +G+RGLY G+ P++  AG+S   + F  Y  IK Y   K +   ++L P   +++++ A  +   +T P  V ++RL  Q  G       QY G+ D + K+++ EG  G Y+G    L  T+  A + F +YE+++
Sbjct:   41 HPLDLVKIRFAVSDGLEVRPKYKGILHCLATIWKVDGLRGLYQGVTPNVWGAGLSW-GLYFFFYNAIKSY---KTEGRAEQLEPLEYLVSAAEAGAMTLCITNPLWVTKTRLMLQYGGVASPSQRQYKGMFDALVKIYKYEGVRGLYKGFVPGLFGTSHGA-LQFMAYELLK 207          
BLAST of CX047662 vs. ExPASy Swiss-Prot
Match: MFTC_MACFA (Mitochondrial folate transporter/carrier OS=Macaca fascicularis GN=SLC25A32 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.214e-30
Identity = 74/176 (42.05%), Postives = 104/176 (59.09%), Query Frame = -3
Query:  327 NPLWVVKTRLQTQG---MRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIK-HYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQRFLL 842
            NPLWV KTRL  Q    + S    YK +   L +I   EG+RGLY G +P L G SH A+QF AYE +K  Y    +     +L+    +  ++++K+ A   TYP++VVR+RLQ+Q       + Y+GV+D + K ++KEG  GFY+G A NL+R TP+  ITF  YE +  FLL
Sbjct:  139 NPLWVTKTRLMLQYDAVINSPHRQYKGMFDTLVKIYKYEGVRGLYKGFVPGLFGTSHGALQFMAYELLKLKYNQHINRLPEAQLSTVEYISVAALSKIFAVAATYPYQVVRARLQDQ------HMFYSGVIDVITKTWRKEGIGGFYKGIAPNLIRVTPACCITFVVYENVSHFLL 308          
BLAST of CX047662 vs. ExPASy Swiss-Prot
Match: MFTC_HUMAN (Mitochondrial folate transporter/carrier OS=Homo sapiens GN=SLC25A32 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.203e-29
Identity = 74/176 (42.05%), Postives = 104/176 (59.09%), Query Frame = -3
Query:  327 NPLWVVKTRLQTQG---MRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIK-HYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQRFLL 842
            NPLWV KTRL  Q    + S    YK +   L +I   EG+RGLY G +P L G SH A+QF AYE +K  Y    +     +L+    +  ++++K+ A   TYP++VVR+RLQ+Q       + Y+GV+D + K ++KEG  GFY+G A NL+R TP+  ITF  YE +  FLL
Sbjct:  139 NPLWVTKTRLMLQYDAVVNSPHRQYKGMFDTLVKIYKYEGVRGLYKGFVPGLFGTSHGALQFMAYELLKLKYNQHINRLPEAQLSTVEYISVAALSKIFAVAATYPYQVVRARLQDQ------HMFYSGVIDVITKTWRKEGVGGFYKGIAPNLIRVTPACCITFVVYENVSHFLL 308          
BLAST of CX047662 vs. ExPASy Swiss-Prot
Match: YIA6_YEAST (Uncharacterized mitochondrial carrier YIL006W OS=Saccharomyces cerevisiae GN=YIL006W PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.053e-29
Identity = 68/175 (38.86%), Postives = 110/175 (62.86%), Query Frame = -3
Query:  330 NPLWVVKTRLQTQG-MRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIK---HYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQRFL 842
            NP+WVVKTRL  Q  +  +   YK    A R++ ++EG + LY+G++PSL G+ HVAI FP YE +K   H  +++++T  + +N   +++ASS++K++AS +TYPHE++R+R+Q +      D     +   +K  + +EG  GFY G  TNL+RT P++ IT  S+E  +  L
Sbjct:  195 NPIWVVKTRLMLQSNLGEHPTHYKGTFDAFRKLFYQEGFKALYAGLVPSLLGLFHVAIHFPIYEDLKVRFHCYSRENNT--NSINLQRLIMASSVSKMIASAVTYPHEILRTRMQLKSD--IPDSIQRRLFPLIKATYAQEGLKGFYSGFTTNLVRTIPASAITLVSFEYFRNRL 365          

HSP 2 Score: 72.0182 bits (175), Expect = 5.079e-12
Identity = 52/157 (33.12%), Postives = 74/157 (47.13%), Query Frame = -3
Query:  390 PLWVVKTRLQTQGMRSNVVP--YKSILSALRRISHEEGMRGLYSGILPSLAGVSHV-AIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSIAKVLA----SVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLL 839
            PL V KTRLQ QG+++      Y+ I+  L  I  +EG RGLY G++P + G      I F  YE  K +           + P    +A S A + A    + +T P  VV++RL  Q    +    Y G  D  +K+F +EGF   Y G   +LL
Sbjct:   97 PLDVAKTRLQAQGLQTRFENPYYRGIMGTLSTIVRDEGPRGLYKGLVPIVLGYFPTWMIYFSVYEFSKKFF--------HGIFPQFDFVAQSCAAITAGAASTTLTNPIWVVKTRLMLQSNLGEHPTHYKGTFDAFRKLFYQEGFKALYAGLVPSLL 245          
BLAST of CX047662 vs. ExPASy Swiss-Prot
Match: YKQ9_SCHPO (Uncharacterized mitochondrial carrier C688.09 OS=Schizosaccharomyces pombe GN=SPAC688.09 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.535e-27
Identity = 68/181 (37.57%), Postives = 100/181 (55.25%), Query Frame = -3
Query:  330 NPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYMAKK---------DDTDVDK-LNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQRFL 842
            NP+W+VKTRLQ          Y+S +  + +    EG RGLY G+  SL GV    +Q+  YE+ KH +A +          +T  DK L+ G  +  + IAK +A+ + YPHEVVR+RL+ Q  +     +Y G++ C K V+ ++G  G Y G   +LLR  P+A I F SYE+I  F+
Sbjct:  181 NPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLGVGESTLQWVLYEKFKHAVAIRQLRRKELGIQETIYDKVLDWGGKLGGAGIAKFMAAGIAYPHEVVRTRLR-QSPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILFGSYEVIMHFI 360          
BLAST of CX047662 vs. ExPASy Swiss-Prot
Match: MCFM_DICDI (Mitochondrial substrate carrier family protein M OS=Dictyostelium discoideum GN=mcfM PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.245e-26
Identity = 66/171 (38.60%), Postives = 96/171 (56.14%), Query Frame = -3
Query:  336 NPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQ--NRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQR 842
            NP++++KTR+Q Q   S    Y  I   +++    EG +GLY G++PSL    H  IQ  +YE IK Y +      +D LN   + IASSI+K LAS + YP +VV++RLQ++    N+     Y G  D + K+ + EG  GFYRG   N L+  P+  IT   YE I++
Sbjct:  129 NPIFLIKTRMQLQTPGSANY-YTGIFDGIKKTVKVEGFKGLYKGVIPSLWLTFHGGIQMSSYEHIKFYFSSNSGKSLDSLNASEIFIASSISKFLASTILYPFQVVKTRLQDERNIPNQNNVRVYNGTKDVIFKILKNEGIIGFYRGLVPNTLKVIPNTSITLLLYEEIKK 298          
BLAST of CX047662 vs. ExPASy Swiss-Prot
Match: S2533_DANRE (Solute carrier family 25 member 33 OS=Danio rerio GN=slc25a33 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.683e-23
Identity = 67/177 (37.85%), Postives = 96/177 (54.24%), Query Frame = -3
Query:  330 NPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYMAKK----DDTDVDKLNPG--SVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEIIQRFL 842
            NP+W+VKTR+Q +  ++      + L   R +   EGMRG Y G+  S AG+S   I F  YE +K Y+A+      DTD DK       +M A++ AK  AS + YPHEV+R+RL+E+G   K   Q A      + V  +EG+  FYRG    L+R  P+  I  ++YE+I   L
Sbjct:  140 NPIWMVKTRMQLE-KKARGEKKMNALQCARYVYKTEGMRGFYRGLTASYAGISETMICFLIYETLKKYLAQSRFTTPDTDNDKGASDFLGLMFAAAFAKGCASCIAYPHEVIRTRLREEGSKYKYFFQTA------RLVAVEEGYAAFYRGLIPQLIRQIPNTAIVLSTYELIVHLL 309          
BLAST of CX047662 vs. ExPASy Swiss-Prot
Match: S2533_BOVIN (Solute carrier family 25 member 33 OS=Bos taurus GN=SLC25A33 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.683e-23
Identity = 60/173 (34.68%), Postives = 96/173 (55.49%), Query Frame = -3
Query:  342 NPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYM------AKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPGFYRGCATNLLRTTPSAVITFTSYEII 842
            NP+W+VKTR+Q +  +       + L   R +   EG+RG Y G+  S AG+S   I F  YE +K Y+      +  + T+ +  N   +M A++++K  AS + YPHEV+R+RL+E+G       +Y   V   + VF++EG+  FYRG    L+R  P+  I  ++YE+I
Sbjct:  147 NPIWMVKTRMQLE-RKVRGSKQMNTLQCARYVYQTEGIRGFYRGLTASYAGISETIICFAIYESLKKYLKEAPLASSTNGTEKNSTNFFGLMAAAALSKGCASCVAYPHEVIRTRLREEGS------KYKSFVQTARLVFREEGYLAFYRGLFAQLIRQIPNTAIVLSTYELI 312          
The following BLAST results are available for this feature:
BLAST of CX047662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
MCFW_DICDI1.201e-3745.03Mitochondrial substrate carrier family protein W O... [more]
YEA6_YEAST1.679e-3140.91Probable mitochondrial carrier YEL006W OS=Saccharo... [more]
MFTC_MOUSE1.856e-3043.43Mitochondrial folate transporter/carrier OS=Mus mu... [more]
MFTC_MACFA9.214e-3042.05Mitochondrial folate transporter/carrier OS=Macaca... [more]
MFTC_HUMAN1.203e-2942.05Mitochondrial folate transporter/carrier OS=Homo s... [more]
YIA6_YEAST2.053e-2938.86Uncharacterized mitochondrial carrier YIL006W OS=S... [more]
YKQ9_SCHPO9.535e-2737.57Uncharacterized mitochondrial carrier C688.09 OS=S... [more]
MCFM_DICDI1.245e-2638.60Mitochondrial substrate carrier family protein M O... [more]
S2533_DANRE1.683e-2337.85Solute carrier family 25 member 33 OS=Danio rerio ... [more]
S2533_BOVIN1.683e-2334.68Solute carrier family 25 member 33 OS=Bos taurus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15G01_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15G01-N2-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047662 ID=CX047662; Name=CX047662; organism=Citrus sinensis; type=EST; length=892bp
TTTTTTTTTTTTTTTTTAAAAAGAACAATTACTTTTATTAAACTTACAGC
AAAATTCAATTTTATGGAAAATTTCCCCAACAGGGAAGATGGAAAATTTC
CCCAACAGGGAAGTTGGAAAAGAAAAAAAGCCGGTCAGTGTCTCGCAGTT
AGCTGATCCTTGCTTCCAAGAGGAATTGAGGGAGTCAGTTTGTTTGATTG
GATTTGCGATTGCCGCAAAGTATCGTTTTCTTCAGCCCCAGCATCATCGA
TTTTCTGCTGAGGCTTAACATGCCCACCAGATTTAGGCTGGATTTGTGAA
TGATTCTTGTCCGGAGGTAGAACTCGCAGCAAGAACCTCTGTATTATCTC
ATAACTGGTAAACGTAATTACAGCAGATGGAGTCGTTCTCAATAGATTTG
TCGCACAGCCACGGTAAAAGCCAGGGAAACCTTCCTTTTGGAATACCTTC
TTGACACAATCAACAACGCCTGCATATTGTACATCAACCTTTCTGTTCTG
CCCTTGCTCTTGAAGCCTTGAACGTACAACCTCATGTGGGTAAGTCATTA
CAGAGGCAAGTACTTTTGCTATTGAAGAAGCAATCATAACACTTCCAGGA
TTTAGCTTATCAACATCTGTGTCATCCTTTTTGGCCATGTAATGCTTGAT
TCTCTCATATGCAGGAAACTGAATAGCAACATGACTAACTCCGGCCAACG
AAGGCAGAATGCCACTATATAACCCTCGCATGCCTTCTTCATGAGAAATC
CTTCTCAGAGCAGAAAGTATGCTTTTGTAGGGAACCACATTTGATCTCAT
TCCCTGAGTTTGGAGTCTGGTCTTCACAACCCACAGTGGATTAGTTGTGA
TGGCTGTAGCAGCCCCAGCACCAGCTGCAGCTATCATATTTT
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