CX047660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047660 vs. ExPASy Swiss-Prot
Match: Y7797_ORYSJ (B3 domain-containing protein Os07g0679700 OS=Oryza sativa subsp. japonica GN=Os07g0679700 PE=2 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 1.261e-76 Identity = 143/291 (49.14%), Postives = 202/291 (69.42%), Query Frame = 2 Query: 2 MDPEGKLVMGFRKASNAVSVQDTQPSAIPNGGHSSESFFSGVFENLSILSGYSGVLQSLKGSTDPHLSAL-SKQLNSPPGDINWVKSEKHEDKTREGLLPPSMLVPERKRSRNIGSKRKRLLIDRLDVLELKLTWEEAQDMLYPPPSVMPSIVTVEDHVFEEYEDPPVFGKRSIFIVRTSGGQEQWAQCDGCSKWRRLPVDVLLPPKWTCMDNVWDHNRCSCSAPDELTPREVENLLRLNKDFKKRKIATSHRLN-QEHEPSGLDALSNAAILGENMGDPGTASVATTTKH 868 ++P GKLVMGFRKA+N VS+ D+Q SAI NG ++ FS ENL+I+SGYSG LQS+KG+ D H S++ +NS GD++W+K++K + EG L KR RNIGSK +RL +D + ELKL W+E Q++L P P+ P++V +ED+ EEY++PPVF KRSIF +R++G Q+QW QCD CSKWRRLP++V++ KWTC DN D CSCSAP+ELTP+E+ +L+ +D ++R+ + + N E + LDA + AA+ G+ +G+ G+ SVATTTKH Sbjct: 450 IEPGGKLVMGFRKATNTVSLPDSQISAIANGSILGDTLFSSTNENLAIVSGYSGFLQSIKGAADLHTSSIYDHHVNSADGDVSWLKTDKFGSRPDEGSLQ------FLKRGRNIGSKSRRLSMDAEEAWELKLYWDEVQELLRPAPTAKPTVVMIEDYEIEEYDEPPVFAKRSIFTIRSTGEQDQWIQCDDCSKWRRLPLNVIVASKWTCADNTIDSKSCSCSAPEELTPKELHIVLQQYEDMRRRRNSFGFKQNIPEMDAVSLDAFATAAVYGD-VGNQGSPSVATTTKH 733
BLAST of CX047660 vs. ExPASy Swiss-Prot
Match: VAL2_ARATH (B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana GN=VAL2 PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 3.669e-76 Identity = 145/289 (50.17%), Postives = 189/289 (65.40%), Query Frame = 2 Query: 5 DPEGKLVMGFRKASNAVSVQDTQPSAIPNGGHSSESFFSGVFENLSILSGYSGVLQSLKGSTDPHLSALSKQLNSPPGDINWVKSEKHEDKTREGLLPPSMLVPERKRSRNIGSKRKRLLIDRLDVLELKLTWEEAQDMLYPPPSVMPSIVTVEDHVFEEYEDPPVFGKRSIFIVRTSGGQEQWAQCDGCSKWRRLPVDVLLPPKWTCMDNVWDHNRCSCSAPDELTPREVENLLRLNKDFKKRKIATSH-RLNQEHEPSGLDALSNAAILGENMGDPGTASVATTTKH 868 +PEGKLVMG+RKA+N+ + Q KGS++P+L+ S LN GDINW K EK ED ++ L S L RKR RNIG+K KRLLID +DVLELK+TWEEAQ++L PP S PSI T+E+ FEEY++PPVFGKR++F+ R +G QEQW QCD C KWR+LPVD+LLPPKW+C DN+ D R SCSAPDEL+PRE + L+R +K+FK+R++A+S+ +LNQ + S L++L NA I G+ G +VA TTKH Sbjct: 374 EPEGKLVMGYRKATNSTATQ------------------------------------MFKGSSEPNLNMFSNSLNPGCGDINWSKLEKSEDMAKDNLFLQSSLTSARKRVRNIGTKSKRLLIDSVDVLELKITWEEAQELLRPPQSTKPSIFTLENQDFEEYDEPPVFGKRTLFVSRQTGEQEQWVQCDACGKWRQLPVDILLPPKWSCSDNLLDPGRSSCSAPDELSPREQDTLVRQSKEFKRRRLASSNEKLNQSQDASALNSLGNAGI--TTTGEQGEITVAATTKH 624
BLAST of CX047660 vs. ExPASy Swiss-Prot
Match: VAL1_ARATH (B3 domain-containing transcription repressor VAL1 OS=Arabidopsis thaliana GN=VAL1 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 4.803e-68 Identity = 140/294 (47.62%), Postives = 192/294 (65.31%), Query Frame = 2 Query: 2 MDPEGKLVMGFRKASNAVSVQDTQPSAIPNGGHSSESFFSGVFENLSILSGYSGVLQSLKGSTDPHLSALSKQLNSPPGDINWVKSEKH-----EDKTREGLLPPSMLVPERKRSRNIGSKRKRLLIDRLDVLELKLTWEEAQDMLYPPPSVMPSIVTVEDHVFEEYEDPPVFGKRSIFIVRTSGGQEQWAQCDGCSKWRRLPVDVLLPPKWTCMDNVWDHNRCSCSAPDELTPREVENLLRLNKDFKKRKIATSHRLNQEHEPSGLDALSNAAILGENMGDPGTASVATTTKH 868 +DP GKL+MG RKA+NA D Q + NG + ++ SGV EN ++G S + S + K+LN P ++N SE + +D TR V E+KR+R IG+K KRLL+ + +EL+LTWEEAQD+L P PSV P+IV +E+ EEY++PPVFGKR+I + SG QE+WA CD CSKWRRLPVD LL KWTC+DNVWD +RCSCSAP+E + +E+EN+L++ ++ KKR+ S + EP GLDAL++AA+LG+ +G+P VATTT+H Sbjct: 382 VDPGGKLIMGSRKAANA---GDMQGCGLTNGTSTEDTSSSGVTENPPSINGSSCI------------SLIPKELNGMPENLN---SETNGGRIGDDPTR---------VKEKKRTRTIGAKNKRLLLHSEESMELRLTWEEAQDLLRPSPSVKPTIVVIEEQEIEEYDEPPVFGKRTIVTTKPSGEQERWATCDDCSKWRRLPVDALLSFKWTCIDNVWDVSRCSCSAPEE-SLKELENVLKVGREHKKRRTGESQAAKSQQEPCGLDALASAAVLGDTIGEP---EVATTTRH 644
BLAST of CX047660 vs. ExPASy Swiss-Prot
Match: Y7633_ORYSJ (B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp. japonica GN=Os07g0563300 PE=2 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 4.227e-48 Identity = 117/292 (40.07%), Postives = 164/292 (56.16%), Query Frame = 2 Query: 2 MDPEGKLVMGFRKASNAVSVQDTQPSAIPNGGHSSESFFSGVFENLSILSGYSGVLQSLKGSTDPHLSALSKQLNSPPGDINWVKSEKHEDKTREGL-LPPSMLVPERKRSRNIGSKRKRLLIDRLDVLELKLTWEEAQDMLYPPPSVMPSIVTVEDHVFEEYEDPPVFGKRSIFIVRTSGGQEQWAQCDGCSKWRRLPVDVLLPPKWTCMDNVWDHNRCSCSAPDELTPREVENLLRLNKDFKKRKIATSHRLNQEH--EPSGLDALSNAAILGENMGDPGTASVATTTKH 868 +DPEGKLVMGFRKA+N + QD QP+ NG + V S S + V + +K +T+ S SP K +K +EG S +P ++++ ++G K KR +D + +ELK+TWEEAQ++L PPP PSIV V+ H FEEYE+PP+ G+R+ F+ SG QWAQC+ CSKWR+LPVD LLP KWTC DN WD R SC + E+ E+ ++ + K+ T +++ ++ GLD L+N AILGE P TT+H Sbjct: 540 IDPEGKLVMGFRKATNLSAEQD-QPTKPANGVLPPPEANNKVVVPDS--SPNAAVPRPIKVNTESKSS-------SPVEQATACKIDKGALPQKEGPGTSSSSPLPVKRKATSVGPKIKRFHMDSEESMELKITWEEAQELLRPPPKA-PSIVVVDGHEFEEYEEPPILGRRTYFVTDQSGENHQWAQCEDCSKWRKLPVDALLPSKWTCSDNKWDSERSSCDSAQEINMEELGEMIPIKPGAAKK---TKGKVDTDNIDVSDGLDTLANLAILGEGESLPS----QPTTRH 813 The following BLAST results are available for this feature:
BLAST of CX047660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047660 ID=CX047660; Name=CX047660; organism=Citrus sinensis; type=EST; length=869bpback to top |