CX047630

Overview
NameCX047630
Unique NameCX047630
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047630 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.378e-55
Identity = 112/160 (70.00%), Postives = 126/160 (78.75%), Query Frame = -2
Query:  304 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 783
            MDFR+MGL+S PLF TLQHMM+M  D + DNK+ NAPT +YVRDAKAMA TPADVKEYPNSYVF +DMPGLKSGDIKVQVEDDN+LLI           GAKY+RMERRVGK MRKFVLPENAN +AISAVCQDGVL+VTV           +TI+VK+A
Sbjct:    1 MDFRVMGLES-PLFHTLQHMMDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKVA 159          
BLAST of CX047630 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.162e-53
Identity = 109/160 (68.12%), Postives = 123/160 (76.88%), Query Frame = -2
Query:  304 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 783
            MD R++G+D++PLF TL HMME   +DS      NAP++ YVRDAKAMA TPADVKEYPNSYVF+VDMPGLKSGDIKVQVE+DNVLLIS          GAK++RMERRVGKFMRKF LPENAN +AISAVCQDGVLTVTV           KTIEVK+A
Sbjct:    1 MDLRLLGIDNTPLFHTLHHMMEAAGEDSV-----NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKVA 155          
BLAST of CX047630 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.795e-48
Identity = 103/155 (66.45%), Postives = 120/155 (77.42%), Query Frame = -2
Query:  304 MGLDSSPLFSTLQHMMEMGADDSADNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 768
            M LDS PLF+TL H+M++   D    K+ NAPTRTYVRDAKAMA TPADVKE+PNSYVF+VDMPG+KSGDIKVQVED+NVLLIS          G KY++MERR+GK MRKFVLPENAN+EAISA+ QDGVLTVTV+          KTI+VK+A
Sbjct:    1 MDLDS-PLFNTLHHIMDL--TDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVTVNKLPPPEPKKPKTIQVKVA 152          
BLAST of CX047630 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.858e-45
Identity = 104/160 (65.00%), Postives = 116/160 (72.50%), Query Frame = -2
Query:  307 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLIS-XXXXXXXXXXGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKI 783
            MD R+MG D  PLF    H+M+   DD + N S  AP+RT++ DAKAMA TPADVKEYPNSYVFI+DMPGLKSGDIKVQV+ DNVL IS           GAKYVRMERRVGK MRKFVLPENAN E I+AVCQDGVLTVTV+          +TIEVKI
Sbjct:    1 MDLRLMGFDH-PLF---HHIMDYAGDDKSSNSS--APSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEVKI 154          
BLAST of CX047630 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.332e-43
Identity = 96/157 (61.15%), Postives = 115/157 (73.25%), Query Frame = -2
Query:  304 IMGLDSSPLFSTLQHMMEMGADDSADNKSFNA-PTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 771
            +MG D  PL   L +++E   D++  NKS N+ P+R YVRDA+AMA TPADVKE PNSYVFIVDMPGLKSGDIKVQVE DNVL+IS          G KYVRMERR+GKFM+KF LPE+AN + ISA+CQDGVLTVTV+          KTI+V++A
Sbjct:    6 LMGFD--PLLRNLHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQVA 160          
BLAST of CX047630 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.542e-42
Identity = 99/167 (59.28%), Postives = 113/167 (67.66%), Query Frame = -2
Query:  304 MDFRIMGLDS----SPLFSTLQHMMEMGAD-DSADNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLIS--XXXXXXXXXXGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 783
            MD R  GL +      L ST+Q M++   D D A       P R YVRDAKAMA TPADVKEYPNSYVFI DMPG+K+ +IKVQVEDDNVL++S            G KY+RMERRVGKFMRKFVLPENANVEAI+AV QDGVL VTV+          KT+EVK+A
Sbjct:    1 MDLRNFGLSNFGLEPQLLSTIQDMLDFADDHDRAGRAPPEQPIRAYVRDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVTVEKLPPPEPKKPKTVEVKVA 167          
BLAST of CX047630 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.776e-41
Identity = 91/165 (55.15%), Postives = 119/165 (72.12%), Query Frame = -2
Query:  304 MDFRIMGLDSSPLFSTLQHMMEMGADDSA---DNK--SFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 783
            MD  + GL++ PL + LQH++++   D+    DNK  S  + TRTYVRDA+AMA TPADVKE P +Y F+VDMPGL +GDI+VQVED+ VL++S           AKY+RMERR+GKFMRKFVLP+NA+V+ ++AVC+DGVLTVTV+          KTIEVK+A
Sbjct:    1 MDAVMFGLET-PLMAALQHLLDVPDGDAGAGGDNKTGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEVKVA 164          
BLAST of CX047630 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.800e-40
Identity = 92/163 (56.44%), Postives = 115/163 (70.55%), Query Frame = -2
Query:  304 MDFRIMGLDSSPLFSTLQHMMEMGADDSA---DNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 783
            MD R+ GL++ PL   LQH++++   D+    D      PTRTYV DA+AMA TPADVKE P +Y F+VDMPGL +GDIKVQVED+ VL+IS           AKY+RMERR+GKFMRKFVLP+NA+++ ISAVC+DGVLTVTV+          KTIEVK+A
Sbjct:    1 MDGRMFGLET-PLMVALQHLLDVPDGDAGAGGDKAGGGGPTRTYVADARAMAVTPADVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVIS-GERRREEREDAKYLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVTVEKLPPPEPKKPKTIEVKVA 161          
BLAST of CX047630 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.684e-38
Identity = 89/167 (53.29%), Postives = 116/167 (69.46%), Query Frame = -2
Query:  304 MDFRIMGLDSSPLFSTLQHMMEM--GADDSADNK-SFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLIS----XXXXXXXXXXGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 783
            M+  + GL++ PL + LQH++++  G   +A  + +   PTR YVRDA+AMA TPADVK+ P +Y F+VDMPGLKS DIKVQVE++ +L+IS                KY+RMERR+GKFMRKFVLP+NA+V+ ISAVCQDGVLTVTV+          KTIEVK+A
Sbjct:    1 MESAMFGLET-PLMTALQHLLDIPDGEGGAAGKQGATGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVTVEKLPPPEPKKPKTIEVKVA 166          
BLAST of CX047630 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.873e-38
Identity = 86/160 (53.75%), Postives = 113/160 (70.62%), Query Frame = -2
Query:  304 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISXXXXXXXXXXGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXKTIEVKIA 783
            MD R+ GL++ P  + L H++++   D A   +    TRTYVRDA+AMA TPADVKE   +Y F+VDMPGL +GDI+VQVED+ VL+IS           AKY+RMERR+GKFMRKFVLP+NA+V+ ++AVC+DGVLTVTV+          KTIE+K+A
Sbjct:    1 MDARMFGLET-PRVAALHHLLDVPDGDKAGGGA----TRTYVRDARAMAATPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVIS-GERRREEREDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEIKVA 154          
The following BLAST results are available for this feature:
BLAST of CX047630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HSP21_SOYBN3.378e-5570.0017.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP21_SOLPE3.162e-5368.1317.3 kDa class II heat shock protein OS=Solanum pe... [more]
HSP21_PEA1.795e-4866.4517.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP21_IPONI1.858e-4565.0017.2 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP21_HELAN1.332e-4361.1517.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP22_IPONI9.542e-4259.2818.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP22_MAIZE2.776e-4155.1517.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_MAIZE1.800e-4056.4417.5 kDa class II heat shock protein OS=Zea mays P... [more]
HSP18_ORYSJ1.684e-3853.2918.0 kDa class II heat shock protein OS=Oryza sati... [more]
HSP23_MAIZE2.873e-3853.7517.0 kDa class II heat shock protein OS=Zea mays G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15E03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15E03-J6-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047630 ID=CX047630; Name=CX047630; organism=Citrus sinensis; type=EST; length=835bp
CGAATTGGGGGTACCGGGCCCCTTTAGATAAAAGCTGGATTTTTCATTAA
TTATAACAACTAGATGTCTACCAGTAGACAGCCGTCAGCTTCCCCTCCGG
AATGCTAAAGACCGAACCGCAAACCAGTGAACAGAGAGAATTTTCGAAAA
AAAGGGAAGAAAAACAAAAAAAGAAAAAGGAAGAGGAGGTTACAGAGGCA
TAGTACCGTCACACCCACAAGCAAAATTATTCATAACAACAACCGGCAAA
TAGAAAAGACATCAGCACCCACAATCCAGCATATTCTCTCTCTTTAAAGT
TCAAGCAATCTTAACCTCAATGGTCTTGGGCTTCTTGGGCTCCGGCGGTG
GCAGCTTATCGACGGTCACAGTCAACACTCCGTCCTGACACACAGCCGAA
ATGGCTTCAACGTTAGCATTCTCAGGCAGCACAAATTTCCTCATAAACTT
GCCGACCCTCCTCTCCATTCTCACATACTTGGCCCCCTCTTTCTCCTCCT
CCCGCTTCCTCTCTCCGCTTATGAGCAGCACATTGTCGTCCTCCACTTGG
ACCTTGATGTCCCCCGACTTCAGTCCGGGCATGTCGACGATGAACACGTA
CGAGTTCGGATACTCCTTTACGTCCGCAGGCGTCCCCGCCATTGCCTTGG
CGTCTCTCACGTACGTGCGCGTCGGCGCGTTGAATGACTTGTTGTCAGCG
GAGTCGTCCGCCCCCATCTCCATCATGTGCTGCAGAGTTGAAAAGAGTGG
CGATGAGTCCAAACCCATGATTCTGAAATCCATTCTTTTGCGAGTATTAG
CTGTTGTTGATGTTCGCTACTGCTAAATGAGGCCT
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