CX047609
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047609 vs. ExPASy Swiss-Prot
Match: PP310_ARATH (Pentatricopeptide repeat-containing protein At4g14190, chloroplastic OS=Arabidopsis thaliana GN=At4g14190 PE=2 SV=2) HSP 1 Score: 278.485 bits (711), Expect = 3.394e-74 Identity = 137/240 (57.08%), Postives = 182/240 (75.83%), Query Frame = 2 Query: 146 SLDYHSTKHTTLLVESYHEHQALNALIQRLNKKVSCPLQILQHDGDWTKDHFWAVIRFLKNSSRSRQIPQVFDMWKNIEKSRINEFNSQKIIGMLCEEGLMEEAVRAFQEM-EGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEXTYKSMLTKRMHLRSSTMVAILDAYMNFG 862 S++ +T+ T+LL H H+ L++L +RL+ SCPL++LQ DGDW+KDHFWAVIRFL+ SSR +I VFD WKN+E SRI+E N ++II LCEE M EA+RAF+ M + L PSLEIYNSIIH Y+ GKF EA+ +LN MKE L P ++TYDGLI+AYGK+KMYDEI +CLK M+ DGC DH+TYNLLI+EF+ GLLKRME Y+S+++++M L ST++++L+AY FG Sbjct: 51 SINGDATQPTSLL----HHHRFLSSLTRRLSLSGSCPLRLLQEDGDWSKDHFWAVIRFLRQSSRLHEILPVFDTWKNLEPSRISENNYERIIRFLCEEKSMSEAIRAFRSMIDDHELSPSLEIYNSIIHSYADDGKFEEAMFYLNHMKENGLLPITETYDGLIEAYGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGLLKRMEQMYQSLMSRKMTLEPSTLLSMLEAYAEFG 286
BLAST of CX047609 vs. ExPASy Swiss-Prot
Match: PP325_ARATH (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 6.090e-15 Identity = 47/148 (31.76%), Postives = 74/148 (50.00%), Query Frame = 2 Query: 419 IGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEXTYKSMLTKRMHLRSSTMVAILDAYMNFG 862 I C+ G +EEAV+ F +ME + P++ +N++I G G+++EA +F +M E + P TY L++ + K + LK M G P+ I YN LI F AG L + M++K + L SST ++ Y G Sbjct: 280 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 427 HSP 2 Score: 73.1738 bits (178), Expect = 2.166e-12 Identity = 40/175 (22.86%), Postives = 79/175 (45.14%), Query Frame = 2 Query: 344 QIPQVFDMWKNIEKSRI--NEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEXTYKSMLTKRMHLRSSTMVAILDAYMNFG 862 ++ + W + +++ + + + +I C+ EE F EM ++P+ +YN +I Y + G+ + AL +MK +SP S TY LI+ +E + + M+++G P+ Y LI + G + ++E + M +K +H T ++ Y G Sbjct: 603 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 777
BLAST of CX047609 vs. ExPASy Swiss-Prot
Match: RF1_ORYSI (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.022e-14 Identity = 43/113 (38.05%), Postives = 66/113 (58.41%), Query Frame = 2 Query: 401 FNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQ 739 FNS II C+EG + E+ + F+ M +KP++ YN++I+GY GK +EA+ L+ M + L P + TY LI Y K ++ + K M+ G SPD ITYN+++Q Sbjct: 479 FNS--IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
BLAST of CX047609 vs. ExPASy Swiss-Prot
Match: PPR38_ARATH (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.794e-14 Identity = 47/174 (27.01%), Postives = 78/174 (44.83%), Query Frame = 2 Query: 335 RSRQIPQVFDMWKNIEKSRINE--FNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEXTYKSMLTKRMHLRSSTMVAILDAY 850 RS D+ + +E+ + F II LC +G ++ A+ F+EME +K S+ YNS++ G K GK+N+ L L +M + P T++ L+ + K E + K M G SP+ ITYN L+ + L M+ + T +++ Y Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
BLAST of CX047609 vs. ExPASy Swiss-Prot
Match: PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.500e-13 Identity = 45/159 (28.30%), Postives = 78/159 (49.06%), Query Frame = 2 Query: 386 SRINEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEXTYKSMLTKRMHLRSSTMVAILDAYMNFG 862 +R F +I +C+EG +E A F+EM+ L P YNS+I G+ K+G+ ++ + F EMK+M P TY+ LI + K+ + MK +G P+ ++Y+ L+ F G++++ Y M + T +++DA G Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG 416
BLAST of CX047609 vs. ExPASy Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.959e-13 Identity = 47/152 (30.92%), Postives = 72/152 (47.37%), Query Frame = 2 Query: 395 NEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEXTYKSMLTKRMHLRSSTMVAILDAY 850 NE ++ ++G M EA R +EM PS+ YN++I+G+ GK +A+ L +MKE LSP +Y ++ + + DE + M G PD ITY+ LIQ F K Y+ ML + T A+++AY Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530 HSP 2 Score: 69.3218 bits (168), Expect = 3.128e-11 Identity = 39/125 (31.20%), Postives = 60/125 (48.00%), Query Frame = 2 Query: 392 INEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLK 766 ++E +I C+EG +A+ EM L PS+ Y S+IH K G N A+ FL++M+ L P TY L+ + + +E L+ M +G SP +TYN LI G ++ Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
BLAST of CX047609 vs. ExPASy Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05665, mitochondrial OS=Arabidopsis thaliana GN=At1g05665 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.364e-13 Identity = 45/145 (31.03%), Postives = 73/145 (50.34%), Query Frame = 2 Query: 416 IIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEXTYKSMLTKRMHLRSSTMVAILDAY 850 +I LC+EG ++ A EM L+P++ YNSI++G K G EA+ + E + L+ + TY L+ AY K D+ LK M G P +T+N+L+ F G+L+ E ML K + ++T +++ Y Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606 HSP 2 Score: 70.0922 bits (170), Expect = 1.834e-11 Identity = 42/147 (28.57%), Postives = 72/147 (48.98%), Query Frame = 2 Query: 362 DMWKNIEKSRINEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEXTYKSMLTK 802 +MWK + I +NS I+ LC+ G +EEAV+ E E L Y +++ Y K G+ ++A L EM L P T++ L+ + + M ++ + L M G +P+ T+N L++++ LK YK M ++ Sbjct: 481 EMWKIGLQPNIFTYNS--IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
BLAST of CX047609 vs. ExPASy Swiss-Prot
Match: PP381_ARATH (Pentatricopeptide repeat-containing protein At5g14770, mitochondrial OS=Arabidopsis thaliana GN=At5g14770 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.364e-13 Identity = 50/184 (27.17%), Postives = 81/184 (44.02%), Query Frame = 2 Query: 317 FLKNSSRSRQIPQVFDMWKNIEKSRINEFNS--QKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEXTYKSMLTKRMHLRSSTMVAILDAYMNFG 862 FL SS+ ++ +F + + I +I LC+ G+ ++A +ME P +NS++HGY +AL + M E +SP TY+ +I+ + E+D L MK G PD TYN LI A G +K Y M+ + ++ST ++ + N G Sbjct: 651 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 834
BLAST of CX047609 vs. ExPASy Swiss-Prot
Match: PP152_ARATH (Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.658e-12 Identity = 46/148 (31.08%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 362 DMWKNIEKSRINEFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEXTYKSMLTKR 805 DM++ KS + FN +I +LC+EG +++A ME F +KP++ YN+++ G+S G+ A L ++EMK P TY+ ++ E+ L+ MK G PD ++YN+LI+ + G L+ M Y+ + K+ Sbjct: 215 DMYRMEIKSNVYTFNI--MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEV---LREMKEIGLVPDSVSYNILIRGCSNNGDLE-MAFAYRDEMVKQ 356 HSP 2 Score: 71.633 bits (174), Expect = 6.302e-12 Identity = 40/134 (29.85%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 398 EFNSQKIIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEXTYKSMLT 799 +F +I +LC + EA F+++ G +KP L + N+++ G+ IG + A L EM M+++P TY+ L++ ++E + MK G PDHI+YN LI ++ G K ML+ Sbjct: 432 QFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLS 565
BLAST of CX047609 vs. ExPASy Swiss-Prot
Match: PP247_ARATH (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.166e-12 Identity = 43/140 (30.71%), Postives = 70/140 (50.00%), Query Frame = 2 Query: 428 LCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQ-EFACAGLLKRMEXTYKSMLTKRMHLRSSTMVAILD 844 LC+ G + +A+ F++M+ + + IYN IIHG K ++A + + + P TY+ +I K E DM + MK DGC+PD TYN+LI+ +GL+ +E + M SST+ ++D Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE-LIEEMKVCGFSADSSTIKMVID 603 HSP 2 Score: 68.5514 bits (166), Expect = 5.335e-11 Identity = 35/113 (30.97%), Postives = 59/113 (52.21%), Query Frame = 2 Query: 416 IIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACA 754 +IG LC +G ++ + +EM G + P + ++++I + K GK EA NEM ++P + TY+ LI + K E + +M GC PD +TY++LI + A Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398 HSP 3 Score: 67.781 bits (164), Expect = 9.100e-11 Identity = 46/165 (27.88%), Postives = 75/165 (45.45%), Query Frame = 2 Query: 362 DMWKNIEKSRINEFNSQK--IIGMLCEEGLMEEAVRAFQEMEGFALKPSLEIYNSIIHGYSKIGKFNEALLFLNEMKEMNLSPQSDTYDGLIQAYGKYKMYDEIDMCLKMMKLDGCSPDHITYNLLIQEFACAGLLKRMEXTYKSMLTKRMHLRSSTMVAILDAY 850 D+++ +E+ I Q +I LC++G ++A+ F EME +K + Y+S+I G GK+++ L EM N+ P T+ LI + K E M G +PD ITYN LI F L + M++K T ++++Y Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395 The following BLAST results are available for this feature:
BLAST of CX047609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047609 ID=CX047609; Name=CX047609; organism=Citrus sinensis; type=EST; length=863bpback to top |