CX047601
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047601 vs. ExPASy Swiss-Prot
Match: ISOA2_ARATH (Isoamylase 2, chloroplastic OS=Arabidopsis thaliana GN=ISA2 PE=1 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 8.368e-62 Identity = 127/284 (44.72%), Postives = 177/284 (62.32%), Query Frame = 3 Query: 3 SVDETQPVFTPTTEVDELQKVSTYLFRTDLGGLVSVSVGKKNVNYAVTIDVSSLQTTRGGH-KLVLIWGVYTSDSSSYMHLGSQCFTPDAKTGSIETPFTQTSFDTFALELGFEAKQTPFYLSFLLKSPL-RDGSGDFEIRNHLSAKFCVPVGLNAGVPSPMGLSFSTDG-SLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDLGLPPKYLGRLCKDPDF 845 S++ + + + E D+L+KV++Y FRT G LV V V KK Y++ + VSSL+ + +LV++WGVY SDSS ++ L + + D++T + ET F ++S L L F+ K++PFYLSF LK RD G E+ H FC+PVG AG P P+GLS D S NF+ FSR + VVLCLYDD+T D+PALELDLDPY+NR+GD+WHAS+++TW+FV YGYR K + + E ++LDPYA ++ S+ KYLG L K P F Sbjct: 75 SIELREALSSRRAEADDLKKVTSYSFRTKAGALVKVKVEKKREKYSILVYVSSLELSGDDKSRLVMVWGVYRSDSSCFLPLDFENSSQDSQTHTTETTFVKSSLSELMLGLEFDGKESPFYLSFHLKLVSGRDPDGQ-EMLTHRDTDFCIPVGFTAGHPLPLGLSSGPDDDSWNFSFFSRSSTNVVLCLYDDSTTDKPALELDLDPYVNRTGDVWHASVDNTWDFVRYGYRCKETAHSKEDVDVEGEPIVLDPYATVVGKSVSQ--------KYLGSLSKSPSF 349
BLAST of CX047601 vs. ExPASy Swiss-Prot
Match: ISOA1_ARATH (Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.876e-15 Identity = 39/108 (36.11%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 456 LNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYD--DTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVN 773 ++ G+PSP G + DG +NF+++S ++ +CL D ++ E+ LDP NR+G +WH + + + YGYRF G FS +G+ ++LLDPYAK I++ Sbjct: 69 ISDGLPSPFGPTVRDDG-VNFSVYSTNSVSATICLISLSDLRQNKVTEEIQLDPSRNRTGHVWHVFLRGDFKDMLYGYRFDGKFSPEEGHYYDSSNILLDPYAKAIIS 175
BLAST of CX047601 vs. ExPASy Swiss-Prot
Match: ISOA3_ARATH (Isoamylase 3, chloroplastic OS=Arabidopsis thaliana GN=ISA3 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.809e-14 Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 3 Query: 456 LNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLY-----DDTTADRPALELDLDPYINRSGDIWHASMES-TWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKII 767 +++G SP+G+S D +NFA+FS++A V LCL D T D +EL LDP +N++GD WH +E N V YGYR G G++ +LLDPYAK++ Sbjct: 85 VSSGEVSPLGVS-QVDKGINFALFSQNATSVTLCLSLSQSGKDDTDDDGMIELVLDPSVNKTGDTWHICVEDLPLNNVLYGYRVDGPGEWQQGHRFDRSILLLDPYAKLV 193
BLAST of CX047601 vs. ExPASy Swiss-Prot
Match: GLGX_YERE8 (Glycogen debranching enzyme OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=glgX PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.500e-13 Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 3 Query: 456 LNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKII 767 L +G P+PMG F G +NF +FS HA+ V LCL+DD EL + P RSGDIWH + YGYR G F+ G++ + +L+DPYA+ + Sbjct: 4 LTSGSPTPMGAHFDGVG-INFTLFSAHAEQVELCLFDDNNQ-----ELRI-PLPARSGDIWHGYLPGGKPGQRYGYRVSGPFNPQQGHRFNPHKLLIDPYARAL 100
BLAST of CX047601 vs. ExPASy Swiss-Prot
Match: GLGX_KLEP3 (Glycogen debranching enzyme OS=Klebsiella pneumoniae (strain 342) GN=glgX PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.600e-12 Identity = 41/114 (35.96%), Postives = 65/114 (57.02%), Query Frame = 3 Query: 456 LNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDL 797 L AG P+P+G S+ G +NFA+FS HA+ V LC++D+ ++ +DL RSGDIWH +++ + YGYR G + G++ + +LLDP A + +P+ L Sbjct: 4 LAAGKPAPLGASYDGKG-VNFALFSAHAERVELCVFDEQGNEQ---RVDLPA---RSGDIWHGWLDAAGPGLRYGYRVHGPWDPAQGHRFNPAKLLLDPCAYRVEGDLPDDERL 110
BLAST of CX047601 vs. ExPASy Swiss-Prot
Match: GLGX_KLEP7 (Glycogen debranching enzyme OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=glgX PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12 Identity = 40/114 (35.09%), Postives = 63/114 (55.26%), Query Frame = 3 Query: 456 LNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKIIVNSIPNHHDL 797 L AG P+P+G S+ G +NFA+FS HA+ V LC++D+ ++ DL RSGDIWH + + + YGYR G + G++ + +L+DP A + +P+ L Sbjct: 4 LAAGKPAPLGASYDGKG-VNFALFSAHAERVELCVFDEQGNEQ---RFDLPA---RSGDIWHGWLAAAGPGLRYGYRVHGPWDPAQGHRFNPAKLLIDPSAHRVEGDLPDDERL 110
BLAST of CX047601 vs. ExPASy Swiss-Prot
Match: GLGX_PECCP (Glycogen debranching enzyme OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=glgX PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.018e-11 Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = 3 Query: 456 LNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAK 761 L G P+P+G SF G +NFA+FS A+ V LC++D+ ++ LEL RSGDIWH + + + YG+R G F G + + +LLDP A+ Sbjct: 4 LQTGKPTPLGASFDGQG-VNFALFSADAERVELCIFDERQQEQ-RLELTA-----RSGDIWHGYLPAAQPGLRYGFRVDGPFEPSQGLRFNPHKLLLDPCAR 98
BLAST of CX047601 vs. ExPASy Swiss-Prot
Match: GLGX_SERP5 (Glycogen debranching enzyme OS=Serratia proteamaculans (strain 568) GN=glgX PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.148e-11 Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 3 Query: 456 LNAGVPSPMGLSFSTDGSLNFAIFSRHAQGVVLCLYDDTTADRPALELDLDPYINRSGDIWHASMESTWNFVSYGYRFKGSFSQGDGYKSHLESVLLDPYAKII 767 L G+ +P+G + +G +NF+++S HA GV LCL+D+ E+ L P RSGDIWH + YGYR G F G + + +LLDP A+ + Sbjct: 4 LTPGIAAPLGAYYDGNG-INFSLYSAHATGVELCLFDEQQR-----EVRL-PLATRSGDIWHGYLPGGKPGQRYGYRVHGPFDPAQGLRFNPNKLLLDPAARAV 100 The following BLAST results are available for this feature:
BLAST of CX047601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047601 ID=CX047601; Name=CX047601; organism=Citrus sinensis; type=EST; length=847bpback to top |