CX047587

Overview
NameCX047587
Unique NameCX047587
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047587 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 1.202e-83
Identity = 155/176 (88.07%), Postives = 168/176 (95.45%), Query Frame = 3
Query:  396 MTLDELFEQKGEVAKAVLEELEKVMGAYGYSIEHILMVDIIPDPAVRKAMNEINAAQRLQLASVYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGASAKEVMDLIMITQYFDTIKDLGNSSNNTTVFLPHGPGHVRDISDQIRNGLMEASAAQVD 923
            M LD+LFEQKGEVAK+VLEELEKVMG YGY+IEHILMVDIIPD +VR+AMNEINAAQR+QLAS+YKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEG SAKEVMDLIMITQYFDTIKDLGNSS NTTVF+PHGPGHVRDI +QIRNGLME++ A ++
Sbjct:    1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMESARAGIN 176          
BLAST of CX047587 vs. ExPASy Swiss-Prot
Match: Y1128_SYNY3 (Uncharacterized protein slr1128 OS=Synechocystis sp. (strain PCC 6803) GN=slr1128 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.078e-15
Identity = 62/266 (23.31%), Postives = 131/266 (49.25%), Query Frame = 3
Query:   90 IDQASVGIVERWGRFEKLAEPGLHFFNPCAGQWLAGILSTRINSLDVRIETK-TKDNVFVQLLCSIQYRIVRANADDAFYELQNPKEQIQAYVFDVVRALVPRMTLDELFEQKGEVAKAVLEELEKVMGAYGYSIEHILMVDIIPDPAVRKAMNEINAAQRLQLASVYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRE---NILNFSHKVEGAS-----------AKEVMDLIMITQYFDTIKDLGNSSNNTTVFL 842
            +++ +  +VER G + K   PGL+F  P   + +    +TR   +D+  ++  TKDNV +     + +RI+  + + A+Y+++N +  +   V   +R+ + ++ LD+ F  + E+ + +L EL+     +G  +  + + DI+P  AV  +M     A+R + A++   E ++   +  A+ +A+A+ L     A+++ AI +   E    +L      E  S           A+E +  ++  QY +    +G+S ++  +FL
Sbjct:   23 VNEKNEYLVERLGSYNKKLTPGLNFTVPILDR-VVFKQTTREKVIDIPPQSCITKDNVAITADAVVYWRII--DMEKAYYKVENLQSAMVNLVLTQIRSEIGKLELDQTFTARTEINELLLRELDISTDPWGVKVTRVELRDIMPSKAVLDSMELQMTAERKKRAAILTSEGQRDSAINSAQGDAQARVL--EAEAKKKAAILNAEAEQQKKVLEAKATAEALSILTEKLSSDNHAREALQFLLAQQYLNMGTTIGSSDSSKVMFL 283          
BLAST of CX047587 vs. ExPASy Swiss-Prot
Match: QMCA_SHIFL (Protein qmcA OS=Shigella flexneri GN=qmcA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.981e-13
Identity = 60/262 (22.90%), Postives = 120/262 (45.80%), Query Frame = 3
Query:  114 VERWGRFEKLAEPGLHFFNPCAGQWLAGILSTRINSLDVRIE-------TKTKDNVFVQLLCSIQYRIVRANADDAFYELQNPKEQIQAYVFDVVRALVPRMTLDELFEQKGEVAKAVLEELEKVMGAYGYSIEHILMVDIIPDPAVRKAMNEINAAQR-----------LQLASVYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGASAKEVMDLIMITQYFDTIKDLGNSSNNTTVFLP 845
            VER+GR+ K  +PGL    P   +     +  +IN ++  ++       +K   NV +  +C IQ      +A  A YE+ N +  I       +R ++  M LDE+  Q+  +   +L  +++    +G  +  I + D+ P   +  +MN    A+R           ++ A + K E EK  Q+ +AE E ++ +L     AR+R A  +     +++   +   +   + ++  +  +Y + ++ +G+SSN+  V +P
Sbjct:   31 VERFGRYTKTLQPGLSLVVPFMDR-----IGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQV----IDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFL--QAEARERSAEAEARATKMVS---EAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMP 278          
BLAST of CX047587 vs. ExPASy Swiss-Prot
Match: QMCA_ECOLI (Protein qmcA OS=Escherichia coli (strain K12) GN=qmcA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.981e-13
Identity = 60/262 (22.90%), Postives = 120/262 (45.80%), Query Frame = 3
Query:  114 VERWGRFEKLAEPGLHFFNPCAGQWLAGILSTRINSLDVRIE-------TKTKDNVFVQLLCSIQYRIVRANADDAFYELQNPKEQIQAYVFDVVRALVPRMTLDELFEQKGEVAKAVLEELEKVMGAYGYSIEHILMVDIIPDPAVRKAMNEINAAQR-----------LQLASVYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGASAKEVMDLIMITQYFDTIKDLGNSSNNTTVFLP 845
            VER+GR+ K  +PGL    P   +     +  +IN ++  ++       +K   NV +  +C IQ      +A  A YE+ N +  I       +R ++  M LDE+  Q+  +   +L  +++    +G  +  I + D+ P   +  +MN    A+R           ++ A + K E EK  Q+ +AE E ++ +L     AR+R A  +     +++   +   +   + ++  +  +Y + ++ +G+SSN+  V +P
Sbjct:   31 VERFGRYTKTLQPGLSLVVPFMDR-----IGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQV----IDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFL--QAEARERSAEAEARATKMVS---EAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMP 278          
BLAST of CX047587 vs. ExPASy Swiss-Prot
Match: QMCA_ECOL6 (Protein qmcA OS=Escherichia coli O6 GN=qmcA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.981e-13
Identity = 60/262 (22.90%), Postives = 120/262 (45.80%), Query Frame = 3
Query:  114 VERWGRFEKLAEPGLHFFNPCAGQWLAGILSTRINSLDVRIE-------TKTKDNVFVQLLCSIQYRIVRANADDAFYELQNPKEQIQAYVFDVVRALVPRMTLDELFEQKGEVAKAVLEELEKVMGAYGYSIEHILMVDIIPDPAVRKAMNEINAAQR-----------LQLASVYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGASAKEVMDLIMITQYFDTIKDLGNSSNNTTVFLP 845
            VER+GR+ K  +PGL    P   +     +  +IN ++  ++       +K   NV +  +C IQ      +A  A YE+ N +  I       +R ++  M LDE+  Q+  +   +L  +++    +G  +  I + D+ P   +  +MN    A+R           ++ A + K E EK  Q+ +AE E ++ +L     AR+R A  +     +++   +   +   + ++  +  +Y + ++ +G+SSN+  V +P
Sbjct:   31 VERFGRYTKTLQPGLSLVVPFMDR-----IGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQV----IDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFL--QAEARERSAEAEARATKMVS---EAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMP 278          
BLAST of CX047587 vs. ExPASy Swiss-Prot
Match: QMCA_ECO57 (Protein qmcA OS=Escherichia coli O157:H7 GN=qmcA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.981e-13
Identity = 60/262 (22.90%), Postives = 120/262 (45.80%), Query Frame = 3
Query:  114 VERWGRFEKLAEPGLHFFNPCAGQWLAGILSTRINSLDVRIE-------TKTKDNVFVQLLCSIQYRIVRANADDAFYELQNPKEQIQAYVFDVVRALVPRMTLDELFEQKGEVAKAVLEELEKVMGAYGYSIEHILMVDIIPDPAVRKAMNEINAAQR-----------LQLASVYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGASAKEVMDLIMITQYFDTIKDLGNSSNNTTVFLP 845
            VER+GR+ K  +PGL    P   +     +  +IN ++  ++       +K   NV +  +C IQ      +A  A YE+ N +  I       +R ++  M LDE+  Q+  +   +L  +++    +G  +  I + D+ P   +  +MN    A+R           ++ A + K E EK  Q+ +AE E ++ +L     AR+R A  +     +++   +   +   + ++  +  +Y + ++ +G+SSN+  V +P
Sbjct:   31 VERFGRYTKTLQPGLSLVVPFMDR-----IGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQV----IDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFL--QAEARERSAEAEARATKMVS---EAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMP 278          
BLAST of CX047587 vs. ExPASy Swiss-Prot
Match: Y827_METJA (Uncharacterized protein MJ0827 OS=Methanocaldococcus jannaschii GN=MJ0827 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.089e-11
Identity = 45/173 (26.01%), Postives = 90/173 (52.02%), Query Frame = 3
Query:   90 IDQASVGIVERWGRFEKLAEPGLHFFNPCAGQWLAGILSTRINSLDVRIETKTKDNVFVQLLCSIQYRIVRANADDAFYELQNPKEQIQAYVFDVVRALVPRMTLDELFEQKGEVAKAVLEELEKVMGAYGYSIEHILMVDIIPDPAVRKAMNEINAAQRLQLASVYKGEAEK 608
            ++Q   G++ R GR     +PG++   P     +   + TR+  +  + E  TKDN  V++   + YR++  + + A  E+++ +  I       +RA++  M LDE+  ++  +   +LE L++   A+G  IE + + +I P   ++ AM +   A+RL+ A++ + E EK
Sbjct:   28 VNQYEGGLIFRLGRVIGKLKPGINIIIPFLDVPVKVDMRTRVTDIPPQ-EMITKDNAVVKVDAVVYYRVI--DVEKAILEVEDYEYAIINLAQTTLRAIIGSMELDEVLNKREYINSKLLEILDRETDAWGVRIEKVEVKEIDPPEDIKNAMAQQMKAERLKRAAILEAEGEK 197          
The following BLAST results are available for this feature:
BLAST of CX047587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PLZ12_LUPPO1.202e-8388.07Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
Y1128_SYNY39.078e-1523.31Uncharacterized protein slr1128 OS=Synechocystis s... [more]
QMCA_SHIFL4.981e-1322.90Protein qmcA OS=Shigella flexneri GN=qmcA PE=3 SV=... [more]
QMCA_ECOLI4.981e-1322.90Protein qmcA OS=Escherichia coli (strain K12) GN=q... [more]
QMCA_ECOL64.981e-1322.90Protein qmcA OS=Escherichia coli O6 GN=qmcA PE=3 S... [more]
QMCA_ECO574.981e-1322.90Protein qmcA OS=Escherichia coli O157:H7 GN=qmcA P... [more]
Y827_METJA6.089e-1126.01Uncharacterized protein MJ0827 OS=Methanocaldococc... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_15B01_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15B01-D2-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047587 ID=CX047587; Name=CX047587; organism=Citrus sinensis; type=EST; length=943bp
AAAAAACTTCAAAAACGAAAACAAAAAGAAGAAGAAAAAACGAGAGTGAG
AGAGACATGGGGAATTCGTTTTGCATGTTGTGTGGGTGCATCGACCAGGC
GAGTGTCGGCATCGTCGAGAGGTGGGGCCGGTTCGAGAAGTTGGCTGAAC
CGGGTCTACACTTTTTCAACCCTTGCGCCGGCCAGTGGCTCGCTGGTATC
CTCTCCACCAGGATCAATTCCCTCGATGTCCGTATCGAGACCAAAACCAA
GGACAATGTCTTTGTGCAACTGCTGTGTTCAATTCAGTACCGGATTGTCA
GAGCAAATGCTGATGATGCATTTTATGAGTTGCAGAACCCCAAAGAGCAG
ATCCAGGCTTATGTGTTTGATGTGGTTCGTGCTCTTGTTCCAAGAATGAC
ATTGGATGAGCTCTTTGAACAAAAAGGCGAAGTTGCTAAAGCTGTTTTGG
AGGAACTTGAGAAGGTGATGGGTGCATATGGATATAGCATTGAGCACATA
TTGATGGTAGACATTATACCTGATCCTGCTGTGCGCAAGGCAATGAATGA
GATCAATGCGGCTCAAAGGCTTCAGCTTGCTAGTGTATACAAAGGGGAAG
CTGAGAAGATTCTCCAAGTTAAAAGAGCAGAAGCTGAAGCTGAAGCCAAG
TACCTTGGTGGCGTAGGTGTGGCCAGGCAACGGCAGGCAATAACAGATGG
TTTGCGAGAGAACATTTTGAACTTCTCTCATAAGGTAGAAGGCGCCTCAG
CTAAGGAGGTTATGGATCTCATCATGATCACTCAGTACTTTGACACGATC
AAGGACCTTGGGAACTCATCAAATAACACAACTGTCTTTCTACCCCATGG
TCCTGGTCATGTTCGGGATATCAGCGATCAGATACGCAACGGGCTGATGG
AGGCATCTGCTGCTCAAGTAGATGGTTGAGTGATTTTTACCCG
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