CX047580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047580 vs. ExPASy Swiss-Prot
Match: CAF1K_ARATH (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1) HSP 1 Score: 391.734 bits (1005), Expect = 2.537e-108 Identity = 190/258 (73.64%), Postives = 219/258 (84.88%), Query Frame = -3 Query: 47 FELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFC-QSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGPEKHAGVLYGLEVY 817 F+LI +++ YPFISMDTEFPG++Y+ D+D R+ P+ Y +LKSNVDAL+LIQVGLTLSD+ GNLPDLG N ++IWEFNFRDFD+ D HAPDSIELLR GIDFERNR+EGV+S RFAELMMSSGL+CNESVSWVTFHSAYDFGYLVKILTRR LP L EFL +LR FFG+ +YDVKHIMRFC Q LYGGLDRVAR+L+V+RAVGKCHQAGSDSLLTW AFQ++RD+YFV DG EKHAGVLYGLEV+ Sbjct: 26 FDLIRGIVEDYPFISMDTEFPGVIYKADLD-----VLRRGNPNYLYNLLKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRHGIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALREFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQAFQRMRDLYFVEDGAEKHAGVLYGLEVF 278
BLAST of CX047580 vs. ExPASy Swiss-Prot
Match: CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE=2 SV=1) HSP 1 Score: 390.193 bits (1001), Expect = 7.381e-108 Identity = 189/258 (73.26%), Postives = 219/258 (84.88%), Query Frame = -3 Query: 47 FELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQ-SLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGPEKHAGVLYGLEVY 817 FELIS++ID YPFISMDTEFPG++++ D+ R P D Y +LK+NVDAL+LIQVGLTLSD +GNLPDLG + FIWEFNFRDFD+A DAHAPDSIELLR QGIDFERN ++GV+S RFAELMMSSGLVCNE VSWVTFHSAYDFGYL+KILTRR LP L EF ++RV FG +YDVKH+M+FC+ L+GGLDRVARTL+V+RAVGKCHQAGSDSLLTWHAFQ++RD+YFV DGPEKHAGVLYGLEV+ Sbjct: 31 FELISEIIDDYPFISMDTEFPGVIFKSDL--------RFTNPDDLYTLLKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQRMRDLYFVQDGPEKHAGVLYGLEVF 280
BLAST of CX047580 vs. ExPASy Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2) HSP 1 Score: 268.085 bits (684), Expect = 4.230e-71 Identity = 138/255 (54.12%), Postives = 187/255 (73.33%), Query Frame = -3 Query: 50 LISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKF-IWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGPEKHAGVLYGLEV 811 LI +V+D +PF++MDTEFPG+V RP T + HY+ LK+NV+ L +IQ+GLT SD GNLP G+ +NK+ IW+FNFR+FD+ +D +A DSIELLR GIDF +N + G+DS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT ++LP F ++ V+F +YD+KH+M+FC SL+GGL+++A LDV R VG CHQAGSDSLLT F+K+++ +F+ EK++GVLYGL V Sbjct: 26 LIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY-------HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGT--DNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTFRKLQENFFI-GSMEKYSGVLYGLGV 268
BLAST of CX047580 vs. ExPASy Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.504e-68 Identity = 137/257 (53.31%), Postives = 184/257 (71.60%), Query Frame = -3 Query: 50 FELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKF-IWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGPEKHAGVLYGLEV 817 F LI +++D++ +I+MDTEFPG+V +P +T Y +Y+ LK NVD L LIQVGLT SD +GNLP G+ +KF IW+FNFR+F+I D +A +SIELLR GIDF++N ++G+D VRF ELMMSSG+V N+++SWVTFH YDFGYLVK+LT + LP +F +L V+F +YD+KH+M FC L+GGL+R+A + V R VG CHQAGSDSLLT +F+K+++ YF EK+ GVLYGL V Sbjct: 24 FALIREIVDKFSYIAMDTEFPGVVLKP---VATFKYNNDL----NYRTLKENVDLLKLIQVGLTFSDENGNLPTCGT---DKFCIWQFNFREFNIGEDIYASESIELLRQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLYVYF-PTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFRKLKERYF-PGSTEKYTGVLYGLGV 267
BLAST of CX047580 vs. ExPASy Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.352e-68 Identity = 134/257 (52.14%), Postives = 184/257 (71.60%), Query Frame = -3 Query: 50 ELISQVIDRYPFISMDTEFPGLVYRP-DVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGP-EKHAGVLYGLEV 814 +LI V+D +P+++MDTEFPG+V RP S Y HY+ LK+NV+ L +IQ+GLT S+ GNLP G+ + IW+FNFR+FD+ +D A DSIELL+ GID +N +G+DS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT ++LP +F ++ V+F +YD+KH+M+FC SL+GGL+++A L+V R VG CHQAGSDSLLT F+K+++ +FV GP K++GVLYGL V Sbjct: 25 DLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY--------HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGT--DKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFV--GPLHKYSGVLYGLGV 267
BLAST of CX047580 vs. ExPASy Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.364e-61 Identity = 124/254 (48.82%), Postives = 174/254 (68.50%), Query Frame = -3 Query: 53 LISQVIDRYPFISMDTEFPGLVYRP-DVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHDGPEKHAGVLYGLE 811 LI Q ID +P+++MDTEFPG+V + +P+ PY + + Y LK+NV+ L LIQ+GLTLSD GNLP G+ N + IW+FNFR+F++ +D A DSIELLR ID E+N + GVD+ RFAEL+M SG+V N+ + WVTFH YDFGYL+K+L+ + LP + +F + FF +YD+K++M FC +LYGGL+++A L V R VG HQAGSDSLLT F K+++ +F K++G L+GL+ Sbjct: 30 LIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN--YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGT--NKQCIWQFNFREFNVISDMFALDSIELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDFFDQMEKFF-PVVYDIKYLMGFCTNLYGGLEKIAELLGVKR-VGISHQAGSDSLLTLRTFIKMKEFFFT-GSLLKYSGFLFGLD 276
BLAST of CX047580 vs. ExPASy Swiss-Prot
Match: CNOT7_XENLA (CCR4-NOT transcription complex subunit 7 OS=Xenopus laevis GN=cnot7 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.785e-53 Identity = 119/253 (47.04%), Postives = 165/253 (65.22%), Query Frame = -3 Query: 56 ISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFV-HDGPEKHAGVLYGL 808 I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ +EG+++ FAEL M+SG+V E V W++FHS YDFGYL+KILT +LP +F ILR+FF IYDVK++M+ C++L GGL VA L++ R +G HQAGSDSLLT AF K+R+++F H K+ G LYGL Sbjct: 27 IRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEVEQDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGL 262
BLAST of CX047580 vs. ExPASy Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.785e-53 Identity = 119/253 (47.04%), Postives = 166/253 (65.61%), Query Frame = -3 Query: 56 ISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFV-HDGPEKHAGVLYGL 808 I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ +EG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP +F ILR+FF IYDVK++M+ C++L GGL VA L++ R +G HQAGSDSLLT AF K+R+++F H K+ G LYGL Sbjct: 27 IRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGL 262
BLAST of CX047580 vs. ExPASy Swiss-Prot
Match: CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3) HSP 1 Score: 209.534 bits (532), Expect = 1.785e-53 Identity = 119/253 (47.04%), Postives = 166/253 (65.61%), Query Frame = -3 Query: 56 ISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFV-HDGPEKHAGVLYGL 808 I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ +EG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP +F ILR+FF IYDVK++M+ C++L GGL VA L++ R +G HQAGSDSLLT AF K+R+++F H K+ G LYGL Sbjct: 27 IRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGL 262
BLAST of CX047580 vs. ExPASy Swiss-Prot
Match: CNOT7_CHICK (CCR4-NOT transcription complex subunit 7 OS=Gallus gallus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.785e-53 Identity = 119/253 (47.04%), Postives = 166/253 (65.61%), Query Frame = -3 Query: 56 ISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFV-HDGPEKHAGVLYGL 808 I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ +EG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP +F ILR+FF IYDVK++M+ C++L GGL VA L++ R +G HQAGSDSLLT AF K+R+++F H K+ G LYGL Sbjct: 27 IRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGL 262 The following BLAST results are available for this feature:
BLAST of CX047580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047580 ID=CX047580; Name=CX047580; organism=Citrus sinensis; type=EST; length=819bpback to top |