CX047553

Overview
NameCX047553
Unique NameCX047553
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047553 vs. ExPASy Swiss-Prot
Match: AVP_PHAAU (Pyrophosphate-energized vacuolar membrane proton pump OS=Phaseolus aureus PE=1 SV=3)

HSP 1 Score: 371.703 bits (953), Expect = 2.467e-102
Identity = 182/232 (78.45%), Postives = 208/232 (89.66%), Query Frame = 2
Query:   74 MGSTLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSNSDKKNGFNDYLIEEEEGINDQSVVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGL 769
            MG+ +L +L TEIL+PVCAV+GI F+L QW +VS+V+L+  R  S N+  KNG+NDYLIEEEEGIND +VV KCA+IQ+AISEGATSFLFTEY+YVG+FM+AFAILIF+FLGSVEGFST  QAC+YD+ K CKPALATA FSTVSFLLG +TS++SGFLGMKIATYANARTTLEARK VGKAFI AFRSGAVMGFLLAANGLLVL+IAINLFK+YYGDDW GLFEAITGYGL
Sbjct:    1 MGAAILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACSYDKTKTCKPALATAIFSTVSFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGL 232          
BLAST of CX047553 vs. ExPASy Swiss-Prot
Match: AVP1_ARATH (Pyrophosphate-energized vacuolar membrane proton pump 1 OS=Arabidopsis thaliana GN=AVP1 PE=1 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.309e-100
Identity = 183/231 (79.22%), Postives = 208/231 (90.04%), Query Frame = 2
Query:   86 LLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSN---SDKKNGFNDYLIEEEEGINDQSVVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGL 769
            LL EL TEILVP+CAV+GI FSL QW++VSRV+LT +   SS+   ++ KNG+ DYLIEEEEG+NDQSVVAKCA+IQ+AISEGATSFLFTEY+YVGVFMI FA +IFVFLGSVEGFST  + CTYD  + CKPALATAAFST++F+LGA+TSVLSGFLGMKIATYANARTTLEARK VGKAFIVAFRSGAVMGFLLAA+GLLVL+I IN+FK+YYGDDWEGLFEAITGYGL
Sbjct:    6 LLPELWTEILVPICAVIGIAFSLFQWYVVSRVKLTSDLGASSSGGANNGKNGYGDYLIEEEEGVNDQSVVAKCAEIQTAISEGATSFLFTEYKYVGVFMIFFAAVIFVFLGSVEGFSTDNKPCTYDTTRTCKPALATAAFSTIAFVLGAVTSVLSGFLGMKIATYANARTTLEARKGVGKAFIVAFRSGAVMGFLLAASGLLVLYITINVFKIYYGDDWEGLFEAITGYGL 236          
BLAST of CX047553 vs. ExPASy Swiss-Prot
Match: AVP_HORVU (Pyrophosphate-energized vacuolar membrane proton pump OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 340.502 bits (872), Expect = 6.091e-93
Identity = 167/228 (73.25%), Postives = 199/228 (87.28%), Query Frame = 2
Query:   86 LLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSNSDKKNGFNDYLIEEEEGINDQSVVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGL 769
            +L EL TEIL+PVC V+GI+F++ QWFIVS+V++T     S+ +  KNG+ DYLIEEEEG+ND +VV KCA+IQ+AISEGATSFLFT YQYVG+FM+ FA +IF+FLGS+EGFSTKGQ CTY +   CKPAL TA FST SFLLGAITS++SGFLGMKIATYANARTTLEARK VGKAFI AFRSGAVMGFLL+++GL+VL+I IN+FK+YYGDDWEGLFE+ITGYGL
Sbjct:    3 ILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVT-PGAASAAAGAKNGYGDYLIEEEEGLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQPCTYSKGT-CKPALYTALFSTASFLLGAITSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLSSSGLVVLYITINVFKMYYGDDWEGLFESITGYGL 228          
BLAST of CX047553 vs. ExPASy Swiss-Prot
Match: HPPA_LEPIN (Pyrophosphate-energized proton pump OS=Leptospira interrogans GN=hppA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20
Identity = 65/165 (39.39%), Postives = 93/165 (56.36%), Query Frame = 2
Query:  290 KCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSV--EGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGF---LLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGL 769
            K  +I SAISEGA +FL  EY+ + +F+   A+LI + L +   EGF+                      ++ ++F+ GA+ S +SGF+GMKIAT  N RT   A+ S+ KAF VAF SGAVMGF    LA  G++VLF+      +Y G +   L E++ G+GL
Sbjct:   42 KLLEISSAISEGAMAFLVREYKVISLFIAFMAVLIVLLLDNPGSEGFND-------------------GIYTAIAFVSGALISCISGFIGMKIATAGNVRTAEAAKSSMAKAFRVAFDSGAVMGFGLVGLAILGMIVLFLVFT--GMYPGVEKHFLMESLAGFGL 185          
BLAST of CX047553 vs. ExPASy Swiss-Prot
Match: HPPA_LEPIC (Pyrophosphate-energized proton pump OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=hppA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20
Identity = 65/165 (39.39%), Postives = 93/165 (56.36%), Query Frame = 2
Query:  290 KCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSV--EGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGF---LLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGL 769
            K  +I SAISEGA +FL  EY+ + +F+   A+LI + L +   EGF+                      ++ ++F+ GA+ S +SGF+GMKIAT  N RT   A+ S+ KAF VAF SGAVMGF    LA  G++VLF+      +Y G +   L E++ G+GL
Sbjct:   42 KLLEISSAISEGAMAFLVREYKVISLFIAFMAVLIVLLLDNPGSEGFND-------------------GIYTAIAFVSGALISCISGFIGMKIATAGNVRTAEAAKSSMAKAFRVAFDSGAVMGFGLVGLAILGMIVLFLVFT--GMYPGVEKHFLMESLAGFGL 185          
BLAST of CX047553 vs. ExPASy Swiss-Prot
Match: HPPA_CLOTE (Pyrophosphate-energized proton pump OS=Clostridium tetani GN=hppA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.317e-14
Identity = 57/157 (36.31%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  299 DIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGL 769
            +I   I +GA +FL TEY+Y+  F++   +++ +F+G                         TAA     F+LGAI S+ +G+ GM +AT AN RT   AR S GKA  +AF  GAVMG  ++  GL V+ I I    +YY   + G  E +TG+GL
Sbjct:   38 EIAGHIHDGAMAFLKTEYKYLTGFIVIVTVILAIFVG-----------------------WQTAA----CFILGAIFSIFAGYFGMNVATKANVRTAEAARHSQGKALNIAFSGGAVMG--MSVVGLGVVGIGI----MYY--IFGGNMEFVTGFGL 159          
BLAST of CX047553 vs. ExPASy Swiss-Prot
Match: HPPA_BACTN (Pyrophosphate-energized proton pump OS=Bacteroides thetaiotaomicron GN=hppA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.256e-13
Identity = 57/150 (38.00%), Postives = 77/150 (51.33%), Query Frame = 2
Query:  233 FNDYLIEEEEGINDQSVVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLL 682
            F+  +++E EG      +A      +A+ +GA S+L  +Y+ VG           VFLG V  FS    A  +  Q +  P         ++FL G   S LSGFLGMK ATYA+ART   AR S+     +AFRSGAVMG ++   GLL
Sbjct:   23 FHKQMMKESEGTPQMIKIA------AAVRKGAMSYLKQQYKIVGC----------VFLGLVILFSI--MAYGFHVQNVWVP---------IAFLTGGFFSGLSGFLGMKTATYASARTANAARNSLNSGLRIAFRSGAVMGLVVVGLGLL 145          
BLAST of CX047553 vs. ExPASy Swiss-Prot
Match: HPPA_FUSNN (Pyrophosphate-energized proton pump OS=Fusobacterium nucleatum subsp. nucleatum GN=hppA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 48/140 (34.29%), Postives = 75/140 (53.57%), Query Frame = 2
Query:  284 VAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARK-SVGKAFIVAFRSGAVMGFLLAANGLLVLFIAI 700
            + K  +I +AI EGA +FL  EY+ + VF+I  A+ + +F+                       ++ TA     +F+LGAITS ++G  GM+IAT AN RT + A++  + KA  VAF  GAVMG  +   G+ +L + +
Sbjct:   36 IPKVEEITAAIREGAMAFLAAEYKILIVFVIVVAVALGIFI-----------------------SVPTAG----AFILGAITSAIAGNAGMRIATKANGRTAIAAKEGGLAKALNVAFSGGAVMGLTVVGLGMFMLSLIL 148          
BLAST of CX047553 vs. ExPASy Swiss-Prot
Match: HPPA2_RHOPA (Pyrophosphate-energized proton pump OS=Rhodopseudomonas palustris GN=hppA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 46/132 (34.85%), Postives = 65/132 (49.24%), Query Frame = 2
Query:  287 AKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLL 682
            A+  +I  AI +GA ++L  +Y+ + +     AILIF FLG +                       TAA     F+LGA+ S   GF+GM ++  AN RT   A K +G A  VAF+ GA+ G L+   GLL
Sbjct:   36 ARMQEIAGAIQQGAAAYLARQYKTIAIVGAVLAILIFFFLGGL-----------------------TAA----GFVLGAVLSGACGFIGMNVSVRANVRTAQAATKGIGPALDVAFKGGAITGMLVVGLGLL 140          
BLAST of CX047553 vs. ExPASy Swiss-Prot
Match: HPPA1_METAC (Pyrophosphate-energized proton pump 1 OS=Methanosarcina acetivorans GN=hppA1 PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12
Identity = 56/220 (25.45%), Postives = 91/220 (41.36%), Query Frame = 2
Query:  113 LVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSNSDKKNGFNDYLIEEEEGINDQSVVAKCADIQSAISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGD-DWEGLFEAITGYGL 769
            L P+CA++G+IF+ + +                N   +   ND +                  I ++I  GA  +L  +Y+ + VF++  AI+I +                          L   A +   F+ GA+ S  +G+ GM  AT AN RTT  A + +G AF V+F SG VMG  +   GL  L ++  + +  Y D D   +   + G+ L
Sbjct:    7 LAPICALIGLIFAGISY---------------KNVQNEGAGNDLI----------------KKITASIHGGAMVYLNRQYRAIAVFVVFLAIIIALI-------------------------LPNGALTAACFVFGAVLSATAGYAGMLTATIANGRTTNAATRGIGPAFRVSFASGTVMGMSVVGLGLFGLSLSFIILESVYTDLDLLTIVNIVAGFSL 170          
The following BLAST results are available for this feature:
BLAST of CX047553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
AVP_PHAAU2.467e-10278.45Pyrophosphate-energized vacuolar membrane proton p... [more]
AVP1_ARATH2.309e-10079.22Pyrophosphate-energized vacuolar membrane proton p... [more]
AVP_HORVU6.091e-9373.25Pyrophosphate-energized vacuolar membrane proton p... [more]
HPPA_LEPIN1.810e-2039.39Pyrophosphate-energized proton pump OS=Leptospira ... [more]
HPPA_LEPIC1.810e-2039.39Pyrophosphate-energized proton pump OS=Leptospira ... [more]
HPPA_CLOTE4.317e-1436.31Pyrophosphate-energized proton pump OS=Clostridium... [more]
HPPA_BACTN1.256e-1338.00Pyrophosphate-energized proton pump OS=Bacteroides... [more]
HPPA_FUSNN1.814e-1234.29Pyrophosphate-energized proton pump OS=Fusobacteri... [more]
HPPA2_RHOPA1.814e-1234.85Pyrophosphate-energized proton pump OS=Rhodopseudo... [more]
HPPA1_METAC3.094e-1225.45Pyrophosphate-energized proton pump 1 OS=Methanosa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14G12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14G12-N23-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047553 ID=CX047553; Name=CX047553; organism=Citrus sinensis; type=EST; length=769bp
TCTCTTGCTTCACTGCGTTCATCCCATTTTTCCTTCCCTCTTTTTTTCTT
CGTTTTTATAATTTTCTTTCGCGATGGGATCGACGCTGCTGTCGGAGCTC
GCGACGGAAATCCTGGTCCCGGTTTGTGCCGTGGTCGGAATCATCTTCTC
GCTCGTCCAGTGGTTCATCGTCTCCCGCGTGAGGCTGACGCACGAGAGGC
CGCCGAGCAGCAACAGCGACAAGAAGAATGGATTCAACGATTACTTGATC
GAAGAAGAGGAAGGGATTAACGACCAGAGTGTCGTCGCCAAATGCGCCGA
TATTCAGAGTGCTATCTCTGAAGGTGCCACATCCTTTCTTTTTACTGAAT
ATCAGTATGTTGGGGTTTTCATGATCGCTTTTGCAATTTTGATCTTCGTT
TTCCTGGGGTCTGTGGAGGGCTTCAGCACAAAGGGCCAAGCCTGCACTTA
TGACCAGCAGAAGATGTGCAAGCCAGCACTTGCCACTGCAGCCTTCAGTA
CTGTGTCATTCTTGCTTGGTGCTATAACCTCTGTTCTTTCTGGGTTCCTT
GGGATGAAGATTGCCACTTATGCCAATGCAAGAACTACCTTAGAAGCAAG
AAAGAGTGTCGGGAAGGCTTTTATTGTTGCATTTAGATCTGGTGCAGTGA
TGGGTTTCCTCCTTGCAGCTAATGGTCTTTTAGTGCTGTTCATTGCAATC
AATCTTTTCAAGCTGTACTATGGTGATGACTGGGAGGGACTTTTTGAGGC
CATTACTGGTTATGGTCTT
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