CX047544

Overview
NameCX047544
Unique NameCX047544
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDI1_ARATH (Probable protein disulfide-isomerase 1 OS=Arabidopsis thaliana GN=At1g21750 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.839e-29
Identity = 83/241 (34.44%), Postives = 128/241 (53.11%), Query Frame = 1
Query:  148 SSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS--RLASKQEIDAFPTLKIFMHG--IPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGT----FFPLFIGFGLDKSVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTLN 846
            S E ETK      V+ LD +NF   I+  D+I+V+FYAPWCGHCK+LAP+ ++AA  L+    P+V+AK+DA + +    A++ E+  FPT+KIF +G     EY GPR+AE +V YLKK   P  + + S  + S+ V +        FP   G   D    S +A+  K ++    A       +   +      +V L   ++E  +    FD E LE+F+K++ +PL    ++D  N
Sbjct:   23 SEETETK----EFVLTLDHTNFTDTINKHDFIVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTYLKKQSGPASAEIKSADDASEVVSDKKVVVVGIFPKLSGSEFD----SFMAIAEKLRSELDFAHTSDAKLLPRGESSVTGPVVRLFKPFDEQFVDSKDFDGEALEKFVKESSIPLITVFDKDPNN 255          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDI_MEDSA (Protein disulfide-isomerase OS=Medicago sativa GN=PDI PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.626e-29
Identity = 82/238 (34.45%), Postives = 128/238 (53.78%), Query Frame = 1
Query:  157 EETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR--LASKQEIDAFPTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGT----FFPLFIGFGLDKSVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTLN 846
            EE+       V+ LD +NF   +   D+I+V+FYAPWCGHCK+LAP+ ++AA IL+  + P+V+AKVDA++     LAS+ ++  FPT+KIF +G     EY GPR+AE +V YLKK   P  + + S  + + FV +        FP F G   D  +    AL  K ++ +  A   +   +   D      +V L   ++E  +    F+ E LE+FI+++  P+    N +  N
Sbjct:   25 EESSTDAKEFVLTLDNTNFHDTVKKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSTHEPPVVLAKVDANEEHNKDLASENDVKGFPTIKIFRNGGKNIQEYKGPREAEGIVEYLKKQSGPASTEIKSADDATAFVGDNKVVIVGVFPKFSGEEYDNFI----ALAEKLRSDYDFAHTLNAKHLPKGDSSVSGPVVRLFKPFDELFVDSKDFNVEALEKFIEESSTPIVTVFNNEPSN 258          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDI_DROME (Protein disulfide-isomerase OS=Drosophila melanogaster GN=Pdi PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.204e-27
Identity = 75/235 (31.91%), Postives = 120/235 (51.06%), Query Frame = 1
Query:  148 SSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDKSVMSNLALKYKKKA----WFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDT 840
            ++  E + K++  V+     NF   I+  +++LV+FYAPWCGHCK LAP+  +AA  LA+ + PI +AKVDA     LA +  +  +PTLK F  G P EY G R+A  ++ ++ K   P    L S A+   F+++           G  K + S  A  + K A     F      + D +  Y+  K   +V  +P  ++ ++F G  +EE L++F +   LPL V  N ++
Sbjct:   16 AASAEAEVKVEEGVLVATVDNFKQLIADNEFVLVEFYAPWCGHCKALAPEYAKAAQQLAEKESPIKLAKVDATVEGELAEQYAVRGYPTLKFFRSGSPVEYSGGRQAADIIAWVTKKTGPPAKDLTSVADAEQFLKDNEIAI-----IGFFKDLESEEAKTFTKVANALDSFVFGVSSNADVIAKYE-AKDNGVVLFKPFDDKKSVFEGELNEENLKKFAQVQSLPLIVDFNHES 244          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDI2_DICDI (Protein disulfide-isomerase 2 OS=Dictyostelium discoideum GN=pdi2 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.204e-27
Identity = 80/220 (36.36%), Postives = 122/220 (55.45%), Query Frame = 1
Query:  196 LDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDK--SVMSNLALKYKKKAWFAVA--KDFSEDTMVLYDFDKVPALVALQPSYNEHNIFY-GPFDEEFLEEFIKQNFLPLSVPINQDT 840
            LD  NF +++S  D  LV FYAPWCGHCK L P  +EAA  L+  K+ I IAKVD  ++ +L  + ++  +PTL +F +G    Y G R  + +V+ L++ + P +S L S+ ++ +F +        F     D    + S LA   KK A FAV   KDFS++ +     +  P +V  + S++E  + + G FD E L +FIK N +PL   IN++T
Sbjct:   46 LDSDNFHNSVSEHDVTLVMFYAPWCGHCKTLKPLYEEAAKQLSANKK-IAIAKVDCTQHEQLCKQNKVQGYPTLVVFKNGKAEPYEGDRTTKSIVQTLEEELKPTISTLESNEDIEEFKKQHPISVVGFFDNDHDDRFKLFSELAGNNKKSAKFAVVIDKDFSKEHV-----ESTPNVVLFR-SFDEPTVAHKGEFDSESLIKFIKGNSVPLLGEINRNT 258          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDI2_ARATH (Protein disulfide-isomerase 2 OS=Arabidopsis thaliana GN=At1g77510 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.323e-27
Identity = 85/240 (35.42%), Postives = 130/240 (54.17%), Query Frame = 1
Query:  151 SEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS--RLASKQEIDAFPTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAP-DVSILNSDAEVSDFVEN---AGTFFPLFIGFGLDKSVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTLN 846
            SEE  +F     V+ LD SNF   IS  D+I+V+FYAPWCGHC++LAP+ ++AA  L+    P+ +AK+DA + +    A++ +I  FPTLKI  +G  +  +Y GPR+AE +V YLKK   P  V I ++D+      E    A   FP   G   D    S +AL  K +A +  A       +   +  + PA+   +P ++E  +    F+ E LE+F+K++ +PL    + D  N
Sbjct:   24 SEETKEF-----VLTLDHSNFTETISKHDFIVVEFYAPWCGHCQKLAPEYEKAASELSSHNPPLALAKIDASEEANKEFANEYKIQGFPTLKILRNGGKSVQDYNGPREAEGIVTYLKKQSGPASVEIKSADSATEVVGEKNVVAVGVFPKLSGDEFD----SFMALAEKLRADYDFAHTLDAKFLPRGESVEGPAVRLFKP-FDELFVDSKDFNGEALEKFVKESSIPLVTVFDSDPNN 253          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDI_RICCO (Protein disulfide-isomerase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.218e-26
Identity = 77/240 (32.08%), Postives = 127/240 (52.92%), Query Frame = 1
Query:  151 SEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS--RLASKQEIDAFPTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTF----FPLFIGFGLDKSVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTLN 846
            SEEE        V+ LD +NF   IS  D+I+V+FYAPWCGHCK+L P+ ++AA IL     P+V+AKVDA++ +   LA++ +I  FPTLKI  +G  +  EY GPR+A+ +  YLKK   P    + S    + F+ +   F    FP F G    +   + +++  K ++ +          +   +      +V L   ++E  + +  F+ + LE+F++++ +P+    N D  N
Sbjct:   27 SEEE-----QSSVLTLDSTNFTDTISKHDFIVVEFYAPWCGHCKKLRPEYEKAASILKSHDIPVVLAKVDANEEANKELATQYDIKGFPTLKILRNGGKSIQEYKGPREADGIAEYLKKQSGPASVEIKSTEAANTFIGDKKIFIVGVFPKFSG----EEYENYMSVADKLRSDYEFGHTLDAKHLPQGESSVTGPVVRLFKPFDELFVDFKDFNVDALEKFVEESSMPVVTVFNSDPSN 257          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDIA1_RAT (Protein disulfide-isomerase OS=Rattus norvegicus GN=P4hb PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 6.043e-26
Identity = 77/225 (34.22%), Postives = 114/225 (50.67%), Query Frame = 1
Query:  178 DGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHG---IPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAG-TFFPLFIGFGLDKSVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDT 840
            +  V+ L +SNF  A+++ +Y+LV+FYAPWCGHCK LAP+  +AA  L      I +AKVDA + S LA +  +  +PT+K F +G    P EY   R+A+ +V +LKK   P  + L+  A     V+++  T    F   G D +    LA +      F +    + D    Y  DK   +V  +      N F G   +E L +FIK N LPL +   + T
Sbjct:   25 EDNVLVLKKSNFAEALAAHNYLLVEFYAPWCGHCKALAPEYAKAAAKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKRTGPAATTLSDTAAAESLVDSSEVTVIGFFKDAGSDSAKQFLLAAEAVDDIPFGITS--NSDVFSKYQLDK-DGVVLFKKFDEGRNNFEGEITKEKLLDFIKHNQLPLVIEFTEQT 246          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDI_DATGL (Protein disulfide-isomerase OS=Datisca glomerata GN=PDI PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.892e-26
Identity = 74/228 (32.46%), Postives = 123/228 (53.95%), Query Frame = 1
Query:  187 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS--RLASKQEIDAFPTLKIFMHG--IPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGT----FFPLFIGFGLDKSVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTLN 846
            V+ LD+SNF   +S  ++I+V+FYAPWCGHCK+LAP+ ++AA IL+    P+++AKVDA++ +   LAS+ E+  FPT+KI  +G  I  EY GPR A+ +V YLKK   P  + + S  + ++ V          FP F G    +   +  AL  K ++ +          +   +      +V L   ++E  + +  FD   LE+ ++++ +P     ++D  N
Sbjct:   35 VLTLDKSNFFDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASILSSHDPPVILAKVDANEEANKELASEFEVRGFPTIKILRNGGKIVQEYKGPRDADGIVDYLKKQSGPPSAEIKSIEDATNLVSEKKIVVVGIFPKFSG----EEFENFSALAEKLRSDYEFGHTLDAKLLPRGESSVSGPVVRLFKPFDELFVDFQDFDVNALEKLVEESSVPTVTIFDKDPSN 258          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDI_WHEAT (Protein disulfide-isomerase OS=Triticum aestivum GN=PDI PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.346e-25
Identity = 85/235 (36.17%), Postives = 116/235 (49.36%), Query Frame = 1
Query:  187 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA--DKYSRLASKQEIDAFPTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAPDVSILNSDAE-----------VSDFVENAGTFFPLFIGFGLDKSVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTLN 846
            V+ L   NFD AI+   +ILV+FYAPWCGHCK LAP+ ++AA +L+K    IV+AKVDA  +K   LA K E+  FPTLKIF  G     EY GPR+AE +V YLKK V P    + +  +           V  F E +GT F  F            L L  K ++ +        + +   D      LV L   ++E  +    FD   LE+FI  +  P  V  +++  N
Sbjct:   41 VLTLHADNFDDAIAKHPFILVEFYAPWCGHCKSLAPEYEKAAQLLSKHDPAIVLAKVDANDEKNKPLAGKYEVQGFPTLKIFRSGGKNIQEYKGPREAEGIVEYLKKQVGPASKEIKAPEDATYLEDGKIHIVGVFTEFSGTEFTNF------------LELAEKLRSDYDFGHTVHANHLPRGDAAVERPLVRLFKPFDELVVDSKDFDVSALEKFIDASSTPKVVTFDKNPDN 263          

HSP 2 Score: 75.8702 bits (185), Expect = 3.439e-13
Identity = 44/105 (41.90%), Postives = 64/105 (60.95%), Query Frame = 1
Query:  184 KVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK-IFMHGIPTEYYGPRKAELLVRYLKK 495
            KV+  D  + D    S   +L++FYAPWCGHCK+LAP LDEAA  L + +E +VIAK+DA   + +  + ++  +PTL  +   G    Y G R A+ +V Y+KK
Sbjct:  385 KVVVADNIH-DVVFKSAKNVLIEFYAPWCGHCKKLAPILDEAAATL-QSEEDVVIAKIDATA-NDVPGEFDVQGYPTLYFVTPSGKKVSYEGGRTADEIVDYIKK 486          
BLAST of CX047544 vs. ExPASy Swiss-Prot
Match: PDI_HORVU (Protein disulfide-isomerase OS=Hordeum vulgare GN=PDI PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.758e-25
Identity = 78/224 (34.82%), Postives = 116/224 (51.79%), Query Frame = 1
Query:  187 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA--DKYSRLASKQEIDAFPTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTFFPLFIGFGLDKSVMSNLALKYKKKAWFAVAKDFSEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTLN 846
            V+ L   NFD AI    +ILV+FYAPWCGHCK LAP+ ++AA +L+K    IV+AKVDA  +K   LA K E+  FPTLKIF +G  +  EY GPR+AE +V YLKK V P    + +  + +   +       +F  F       + L +  K ++++        + +   D      +V L   ++E  +    FD   LE+FI  +  P  V  +++  N
Sbjct:   40 VLTLHADNFDDAIGQHPFILVEFYAPWCGHCKSLAPEYEKAAQLLSKHDPAIVLAKVDANDEKNKPLAGKYEVQGFPTLKIFRNGGKSIQEYKGPREAEGIVEYLKKQVGPASKEIKAPEDATYLEDGKIHIVGVFTEFS-GPEFTNFLEVAEKLRSYYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVDSKDFDVSALEKFIDASSTPKVVIFDKNPDN 262          

HSP 2 Score: 74.3294 bits (181), Expect = 1.001e-12
Identity = 43/105 (40.95%), Postives = 65/105 (61.90%), Query Frame = 1
Query:  184 KVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK-IFMHGIPTEYYGPRKAELLVRYLKK 495
            KV+  D  + D    S   +L++FYAPWCGHCK+LAP LDEAA  L + +E +VIAK+DA + + +  + ++  +PTL  +   G    Y G R A+ +V Y++K
Sbjct:  384 KVVVADNVH-DVVFKSGKNVLIEFYAPWCGHCKKLAPILDEAAATL-QSEEDVVIAKMDATE-NDVPGEFDVQGYPTLYFVTPSGKKVSYEGGRTADEIVDYIRK 485          
The following BLAST results are available for this feature:
BLAST of CX047544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
PDI1_ARATH5.839e-2934.44Probable protein disulfide-isomerase 1 OS=Arabidop... [more]
PDI_MEDSA7.626e-2934.45Protein disulfide-isomerase OS=Medicago sativa GN=... [more]
PDI_DROME3.204e-2731.91Protein disulfide-isomerase OS=Drosophila melanoga... [more]
PDI2_DICDI3.204e-2736.36Protein disulfide-isomerase 2 OS=Dictyostelium dis... [more]
PDI2_ARATH9.323e-2735.42Protein disulfide-isomerase 2 OS=Arabidopsis thali... [more]
PDI_RICCO1.218e-2632.08Protein disulfide-isomerase OS=Ricinus communis PE... [more]
PDIA1_RAT6.043e-2634.22Protein disulfide-isomerase OS=Rattus norvegicus G... [more]
PDI_DATGL7.892e-2632.46Protein disulfide-isomerase OS=Datisca glomerata G... [more]
PDI_WHEAT1.346e-2536.17Protein disulfide-isomerase OS=Triticum aestivum G... [more]
PDI_HORVU1.758e-2534.82Protein disulfide-isomerase OS=Hordeum vulgare GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14G07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14G07-N13-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047544 ID=CX047544; Name=CX047544; organism=Citrus sinensis; type=EST; length=877bp
TGCATTCCATTTTGCTCAAAGCGAAACTGAAAACAAATCACATCGAAATT
GAAGATGCGAGGGATGAGTAAAGGTAGAATATGGATCTTATTGTGTCTGT
TGTTATTGACAGGAAGAGGTATGATGTTATTGACAGGAAGAGGCTTGTCT
TCGGAAGAAGAAACAAAATTCAAAATTGACGGGAAAGTAATAGAACTTGA
CGAATCCAACTTCGATTCTGCAATCTCGTCTTTTGATTACATTTTAGTCG
ATTTTTACGCTCCTTGGTGCGGTCACTGCAAGCGCCTCGCTCCTCAGTTA
GACGAAGCTGCTCCGATACTTGCTAAATTGAAAGAGCCAATTGTAATAGC
AAAAGTAGACGCTGACAAGTACAGCCGTCTTGCTAGTAAGCAAGAGATTG
ATGCATTTCCTACATTGAAGATATTTATGCATGGGATTCCTACGGAATAT
TATGGACCTAGAAAAGCAGAATTGCTTGTTCGTTATCTTAAGAAATTTGT
TGCCCCTGATGTCTCCATTCTTAATTCAGATGCGGAAGTTTCTGACTTTG
TTGAAAATGCTGGTACTTTCTTTCCCCTATTTATTGGTTTTGGGTTGGAT
AAATCAGTCATGTCAAACTTAGCTTTGAAGTATAAGAAAAAGGCCTGGTT
TGCTGTCGCTAAGGATTTCTCTGAGGACACCATGGTGTTGTATGATTTTG
ACAAAGTTCCGGCTTTGGTTGCTCTTCAGCCGAGTTACAATGAGCACAAC
ATTTTTTATGGCCCCTTTGATGAGGAGTTTTTGGAGGAGTTTATAAAACA
AAATTTCCTTCCTCTGTCTGTGCCTATTAACCAAGACACACTGAATCTTT
TGAAAGATGATAAAAGGAAAATTGTCC
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