CX047539

Overview
NameCX047539
Unique NameCX047539
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length766
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047539 vs. ExPASy Swiss-Prot
Match: OLEO6_GOSHI (Oleosin 18.2 kDa OS=Gossypium hirsutum GN=MATP6-A PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.754e-35
Identity = 80/134 (59.70%), Postives = 96/134 (71.64%), Query Frame = 2
Query:  137 GPSASKVLAVLAMLPLGGTFLALAGVTLTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGIADYVGQKTKEVGQDIQSKVHEAGGKTGRT 538
            GPS S+VLAVL +LP+GGT LALAG+TL GT+IGL + TPLFIIFS              TGFL+SGAFGLT LSSLS+VL+ LR  TG+     D AK+RV  + +YVGQKTKEVGQ I++K HE  G+ GRT
Sbjct:   37 GPSTSQVLAVLTLLPIGGTLLALAGLTLAGTVIGLMLATPLFIIFSPVLVPAAIAIAMAVTGFLSSGAFGLTGLSSLSYVLNRLRYATGTEQLDLDHAKRRVQDMTEYVGQKTKEVGQKIENKAHE--GQVGRT 168          
BLAST of CX047539 vs. ExPASy Swiss-Prot
Match: OLEO7_GOSHI (Oleosin 16.4 kDa OS=Gossypium hirsutum GN=MATP7 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.308e-34
Identity = 76/139 (54.68%), Postives = 95/139 (68.35%), Query Frame = 2
Query:  113 GQRGAAAGGPSASKVLAVLAMLPLGGTFLALAGVTLTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGIADYVGQKTKEVGQDIQSKVHEAGGKT 529
            G R     GPS ++VL VL +LP+GGT LALAG+TLTGT+IGLC+ TPLF+IFS               GFL+SGAFGLT LSSLS+V +  RQ TG+    AD+AK+ +  +  YVGQKTKE GQ I++K HE GG+T
Sbjct:   17 GDRTNYQSGPSTTQVLTVLTLLPIGGTLLALAGLTLTGTVIGLCMATPLFVIFSPVLVPAAIAVFMAVAGFLSSGAFGLTGLSSLSYVFNRFRQATGTEQLDADRAKRGMQDMVGYVGQKTKETGQTIENKAHE-GGRT 154          
BLAST of CX047539 vs. ExPASy Swiss-Prot
Match: OLEO4_ARATH (Oleosin 20.3 kDa OS=Arabidopsis thaliana GN=OL2 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.118e-29
Identity = 64/127 (50.39%), Postives = 85/127 (66.93%), Query Frame = 2
Query:  137 GPSASKVLAVLAMLPLGGTFLALAGVTLTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGIADYVGQKTKEVGQDIQSKVHEA 517
            GPS +++LA++A +P+GGT L LAG+TL G++IGL V+ PLF++FS              TG L SG FGLT LSS+SWVL+ LR  + +VPE  D AK+R+A    Y G K KE+GQ +Q K HEA
Sbjct:   46 GPSTNQILALIAGVPIGGTLLTLAGLTLAGSVIGLLVSIPLFLLFSPVIVPAALTIGLAVTGILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKRRMADAVGYAGMKGKEMGQYVQDKAHEA 172          
BLAST of CX047539 vs. ExPASy Swiss-Prot
Match: OLEO5_ARATH (Oleosin 5 OS=Arabidopsis thaliana GN=At3g01570 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.766e-29
Identity = 62/126 (49.21%), Postives = 87/126 (69.05%), Query Frame = 2
Query:  137 GPSASKVLAVLAMLPLGGTFLALAGVTLTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGIADYVGQKTKEVGQDIQSKVHE 514
            GPS+++VLAV   +P+GGT L +AG+TL G++IGL +  PLF+IFS              TGFL SGA GLT LSS+SWVL+ +R+    +PE  ++AK R+A +A+YVGQ+TK+ GQ I+ K H+
Sbjct:   31 GPSSTQVLAVFVGVPIGGTLLTIAGLTLAGSVIGLMLAFPLFLIFSPVIVPAAFVIGLAMTGFLASGAIGLTGLSSMSWVLNYIRRAGQHIPEELEEAKHRLADMAEYVGQRTKDAGQTIEDKAHD 156          
BLAST of CX047539 vs. ExPASy Swiss-Prot
Match: OLEO1_SOYBN (P24 oleosin isoform A OS=Glycine max PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 6.162e-29
Identity = 70/133 (52.63%), Postives = 86/133 (64.66%), Query Frame = 2
Query:  137 GPSASKVLAVLAMLPLGGTFLALAGVTLTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGIADYVGQKT-------KEVGQDIQSKVHE 514
            GP+ S+VLAVLA LP+GG  L LAG+TL GT+ GL V TPLF++FS               GFLTSGAFGLTALSS SW+L+ +R+   +   +A  AK  +A  A+YVGQKT       KEVGQDIQSK  +
Sbjct:   50 GPTTSQVLAVLAGLPVGGILLLLAGLTLAGTLTGLAVATPLFVLFSPVLVPATVAIGLAVAGFLTSGAFGLTALSSFSWILNYIRETQPASENLAAAAKHHLAEAAEYVGQKTKEVGQKTKEVGQDIQSKAQD 182          
BLAST of CX047539 vs. ExPASy Swiss-Prot
Match: OLES2_BRANA (Oleosin S2-2 OS=Brassica napus GN=S2 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.373e-28
Identity = 62/135 (45.93%), Postives = 89/135 (65.93%), Query Frame = 2
Query:  113 GQRGAAAGGPSASKVLAVLAMLPLGGTFLALAGVTLTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGIADYVGQKTKEVGQDIQSKVHEA 517
            G+    + GPS+++++A++  +P+GG+ LALAG+TL G++IGL ++ PLF++FS              T  L SG FGLT LSS+SWVL+ LR  + +VPE  D AK+R+A    Y GQK KE+GQ +Q K HEA
Sbjct:   35 GRADYKSSGPSSNQIVALIVGVPVGGSLLALAGLTLAGSVIGLMLSVPLFLLFSPVIVPAAITIGLAVTAILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKRRMADAVGYAGQKGKEMGQYVQDKAHEA 169          
BLAST of CX047539 vs. ExPASy Swiss-Prot
Match: OLES1_BRANA (Oleosin S1-2 OS=Brassica napus GN=S1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.341e-28
Identity = 61/126 (48.41%), Postives = 88/126 (69.84%), Query Frame = 2
Query:  137 GPSASKVLAVLAMLPLGGTFLALAGVTLTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGIADYVGQKTKEVGQDIQSKVHE 514
            GPS+++VLAV+A +P+GGT L LAG+TL  ++IGL +  PLF+IFS              TGF+ SGA GLT LSS+SWVL+ +R+    +P+  D+AK+R+A +A+Y GQ+TK+ GQ I+ K H+
Sbjct:   31 GPSSTQVLAVVAGVPVGGTLLTLAGLTLAVSVIGLILAFPLFLIFSPVIVPAAFVIGLAMTGFMASGAIGLTGLSSMSWVLNHIRRVRERIPDELDEAKQRLADMAEYAGQRTKDAGQTIEDKAHD 156          
BLAST of CX047539 vs. ExPASy Swiss-Prot
Match: OLEO2_SOYBN (P24 oleosin isoform B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.341e-28
Identity = 70/133 (52.63%), Postives = 85/133 (63.91%), Query Frame = 2
Query:  137 GPSASKVLAVLAMLPLGGTFLALAGVTLTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGIADYVGQKT-------KEVGQDIQSKVHE 514
            GP+ S+VLAV+A LP+GG  L LAG+TL GT+ GL V TPLFIIFS               GFLTSG FGLTALSS SW+L+ +R+   +   +A  AK  +A  A+YVGQKT       KEVGQDIQSK  +
Sbjct:   49 GPTTSQVLAVVAGLPVGGILLLLAGLTLAGTLTGLVVATPLFIIFSPVLIPATVAIGLAVAGFLTSGVFGLTALSSFSWILNYIRETQPASENLAAAAKHHLAEAAEYVGQKTKEVGQKTKEVGQDIQSKAQD 181          
BLAST of CX047539 vs. ExPASy Swiss-Prot
Match: OLEO_HELAN (Oleosin (Fragment) OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.058e-28
Identity = 63/126 (50.00%), Postives = 80/126 (63.49%), Query Frame = 2
Query:  143 SASKVLAVLAMLPLGGTFLALAGVTLTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGIADYVGQKTKEVGQDIQSKVHEAG 520
            S S+ LA++A+LP+GG  L LA +T  GT+IGL + TPLF+IFS              TGFL SG FGLT LSSLS++ +++RQ  GSVPE  D  K  +    +Y GQKTK+ GQ IQS  HE G
Sbjct:   32 STSRTLAIIALLPVGGILLGLAALTFIGTLIGLALATPLFVIFSPIIVPAVLTIGLAVTGFLASGTFGLTGLSSLSYLFNMVRQTAGSVPESLDYVKGTLQDAGEYAGQKTKDFGQKIQSTAHEMG 157          
BLAST of CX047539 vs. ExPASy Swiss-Prot
Match: OLEO2_ARATH (Oleosin 21.2 kDa OS=Arabidopsis thaliana GN=At5g40420 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.882e-26
Identity = 63/143 (44.06%), Postives = 87/143 (60.84%), Query Frame = 2
Query:  113 GQRGAAAGG---------PSASKVLAVLAMLPLGGTFLALAGVTLTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXXTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGIADYVGQKTKEVGQDIQSKVHE 514
            G RG   GG         PS+++VL++L  +P+ G+ LALAG+ L G++IGL V  PLF++FS              TGFL SG FGLT LSS+SWV++ LR    +VPE  + AK+R+A    Y GQK KE+GQ +Q+K  +
Sbjct:   31 GDRGYGGGGYKSMMPESGPSSTQVLSLLIGVPVVGSLLALAGLLLAGSVIGLMVALPLFLLFSPVIVPAALTIGLAMTGFLASGMFGLTGLSSISWVMNYLRGTRRTVPEQLEYAKRRMADAVGYAGQKGKEMGQHVQNKAQD 173          
The following BLAST results are available for this feature:
BLAST of CX047539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
OLEO6_GOSHI5.754e-3559.70Oleosin 18.2 kDa OS=Gossypium hirsutum GN=MATP6-A ... [more]
OLEO7_GOSHI8.308e-3454.68Oleosin 16.4 kDa OS=Gossypium hirsutum GN=MATP7 PE... [more]
OLEO4_ARATH2.118e-2950.39Oleosin 20.3 kDa OS=Arabidopsis thaliana GN=OL2 PE... [more]
OLEO5_ARATH2.766e-2949.21Oleosin 5 OS=Arabidopsis thaliana GN=At3g01570 PE=... [more]
OLEO1_SOYBN6.162e-2952.63P24 oleosin isoform A OS=Glycine max PE=2 SV=2[more]
OLES2_BRANA1.373e-2845.93Oleosin S2-2 OS=Brassica napus GN=S2 PE=1 SV=1[more]
OLES1_BRANA2.341e-2848.41Oleosin S1-2 OS=Brassica napus GN=S1 PE=1 SV=1[more]
OLEO2_SOYBN2.341e-2852.63P24 oleosin isoform B OS=Glycine max PE=2 SV=1[more]
OLEO_HELAN3.058e-2850.00Oleosin (Fragment) OS=Helianthus annuus PE=2 SV=1[more]
OLEO2_ARATH4.882e-2644.06Oleosin 21.2 kDa OS=Arabidopsis thaliana GN=At5g40... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14G05_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14G05-N9-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047539 ID=CX047539; Name=CX047539; organism=Citrus sinensis; type=EST; length=766bp
GCTCGATATTTCTCTCTTTACTCTTGAATTAAGCATCTCAATGGCTGAAC
GCGATCGCCCACAGCCACACCAGCTTCAAGTGCACCCACAACAGCACAGT
AAGTCTCTTATTGGCCAAAGAGGAGCAGCAGCAGGAGGCCCTTCAGCAAG
CAAAGTTCTTGCAGTTTTGGCCATGCTGCCCCTCGGTGGAACCTTTCTTG
CTCTTGCCGGTGTCACGCTGACTGGAACCATCATCGGGCTTTGCGTCACC
ACTCCTCTTTTCATAATCTTCAGCCCCGTTATTGTCCCGGCAGCCATTGT
TCTTGCTCTTGCAGTGACTGGGTTTTTAACGTCGGGGGCTTTCGGGCTGA
CGGCCTTGTCTTCGCTCTCGTGGGTCCTGAGCATATTGCGGCAGAAGACT
GGGTCGGTGCCGGAGATGGCGGACCAGGCGAAGAAGCGGGTGGCGGGAAT
AGCGGATTATGTGGGCCAGAAGACTAAGGAAGTTGGGCAGGATATTCAGA
GTAAGGTTCATGAAGCAGGAGGGAAGACGGGGAGGACATAAAATGTTGAT
CTGATATGATCGGTTGATGGGGAAGACAATGTGTGGTTTCTTTTTAGGGC
TTTAGTGTTGGTTTTGTAGTTGTAATAAGTTTTGTGTATTCAGTCGTAGG
AGAGTCCGTCCTCTGTTGTGGCTTGTGAGGTGCAAGGGTTTGGCTCTTGG
GCTTACTTGGAATGCAAGGCATTTGGTGCTTTTGTTTTTGGGTTTAATTA
TCTAGAATTTGAATAT
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