CX047530

Overview
NameCX047530
Unique NameCX047530
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047530 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.396e-57
Identity = 109/169 (64.50%), Postives = 127/169 (75.15%), Query Frame = -2
Query:  300 HKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYTAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 803
            HKKE F++LNPFGQVP  E GD KLFESRAITQY A  + DKG QL     K +A + VW EVE+ +FDP +SKL +E+V KPM GM TD AAV ENE KL K+LDVYE+RL  SKYL  DSFTL DLHH P +N L+GT VK LFD+RPHVSAW ADI +RPAW+K +
Sbjct:   40 HKKEPFITLNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKSLFDSRPHVSAWCADILARPAWSKAI 208          
BLAST of CX047530 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.670e-56
Identity = 110/168 (65.48%), Postives = 125/168 (74.40%), Query Frame = -2
Query:  300 HKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYTAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 803
            HKKE F+  NPFG+VP  E GD K+FESRAITQY A EF DKG  L   GK +A + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RPHVSAW ADITSRP+  KVL
Sbjct:   41 HKKEPFILRNPFGKVPAFEDGDFKIFESRAITQYIAHEFSDKGNNLLSTGKDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRPSAQKVL 208          
BLAST of CX047530 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 214.927 bits (546), Expect = 4.114e-55
Identity = 111/169 (65.68%), Postives = 125/169 (73.96%), Query Frame = -2
Query:  300 HKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYTAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 803
            HKKE F+  NPFG+VP  E GD KLFESRAITQY A  + DKG QL   G K IA + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RPHVSAW ADITSRP+  KVL
Sbjct:   41 HKKEPFIFRNPFGKVPAFEDGDFKLFESRAITQYIAHFYSDKGNQLVSLGSKDIAGIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRPSAKKVL 209          
BLAST of CX047530 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.197e-54
Identity = 104/173 (60.12%), Postives = 130/173 (75.14%), Query Frame = -2
Query:  288 HKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYTAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 803
            HKK  +LSLNPFGQVP  E GD KLFESRAITQY A  + D G QL     K +  + VW EVE  +F+PP++KL WEL  KP+ GMTTD AAV+E+EA+L+K+LD+YE +L++SKYL  DSFTLVDLHH+PNI  L+ + VK++FD+RP VSAW ADI +RPAW K L  L+
Sbjct:   40 HKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKEVFDSRPRVSAWCADILARPAWVKGLEKLQ 212          
BLAST of CX047530 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.941e-54
Identity = 104/173 (60.12%), Postives = 127/173 (73.41%), Query Frame = -2
Query:  288 HKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYTAQEFPDKGTQLTCPGKPIAPLL-VWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 803
            HKK  +LSLNPFGQVP  E GD KLFESRAITQY A  + D G QL        P++ VW EVE  +F+P +SKL WEL  KP+ GMTTD  AV+E+E +L+K+LD+YE RL++SKYL  DSFTLVDLHH+PNI  L+ T VK++FD+RP VSAW ADI +RPAW K L  L+
Sbjct:   40 HKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKEVFDSRPRVSAWCADILARPAWVKGLEKLQ 212          
BLAST of CX047530 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 209.92 bits (533), Expect = 1.324e-53
Identity = 109/174 (62.64%), Postives = 131/174 (75.29%), Query Frame = -2
Query:  288 HKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYTAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 803
            HK+EA L+LNPFGQ+P LE GD  LFESRAITQY A+E+ +KG +L      K  A   VW +VE  QFDP +SKL +E V+K MFGMTTDPAAV+E E KL K+LDVYEARL++S++LA DSFTL DLHHLP I+ LLGT  K LFD+RP VS W   I++RPAWAKV+ L K
Sbjct:   89 HKQEAHLALNPFGQIPALEDGDLTLFESRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKVLFDSRPKVSEWIKKISARPAWAKVIDLQK 262          
BLAST of CX047530 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 209.534 bits (532), Expect = 1.729e-53
Identity = 111/176 (63.07%), Postives = 134/176 (76.14%), Query Frame = -2
Query:  288 HKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYTA--QEFPDKGTQLTCPGK-PIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYL-ACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 803
            HK+ ++L+LNPFGQVP LE G+ KLFESRAIT+Y A   +  ++GT L    K  +A  LVW+EVEA QFDP +SKL WELV+K +FGM TD   VEENEAKLAK+LDVYEARL++S+YL A DSFTLVDLHHLP +  L+GT VKKLF+ R HVSAW   I +RP+W K LAL K
Sbjct:   40 HKQPSYLALNPFGQVPALEDGEIKLFESRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKKLFEERAHVSAWCKKILARPSWEKTLALQK 215          
BLAST of CX047530 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.583e-49
Identity = 104/172 (60.47%), Postives = 120/172 (69.77%), Query Frame = -2
Query:  300 HKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYTAQEFPDKGTQLT-CPGKPIAPLLVWK---EVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 803
            HKKE FLS NPFGQVP  E GD KLFESRAITQY A  + ++GT L     K IA   +     +VEA QFDP +SKL WE V+K  +G+ TD A V E EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP V+ W A+IT RPA  KVL
Sbjct:   41 HKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLPADSKNIAQYAIMSIGIQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKKLFTERPRVNEWVAEITKRPASEKVL 212          
BLAST of CX047530 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 191.43 bits (485), Expect = 4.871e-48
Identity = 101/171 (59.06%), Postives = 121/171 (70.76%), Query Frame = -2
Query:  303 HKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYTAQEFPDKGTQLT-CPGKPI---APLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 803
            HKKE FLS NPFGQVP  E GD KLFESRAITQY A  + ++GT L     K I   A + +  +VE  QFDP +SKL +E ++K ++G+TTD A V E EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP V+ W A+IT RPA  KV
Sbjct:   41 HKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKKLFTERPRVNEWVAEITKRPASEKV 211          
BLAST of CX047530 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 145.976 bits (367), Expect = 2.347e-34
Identity = 82/181 (45.30%), Postives = 110/181 (60.77%), Query Frame = -2
Query:  264 HKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYTAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK-LFDARPHVSAWAADITSRPAWAKVLALLKH*TLCPLP 803
            HK+  FL+LNPFGQ+P L  GD+ LFESRAI +Y A ++  +GT L       A L VW EVE+  F P +S L ++L+ +P+ G   D A VE++  +LAK+LDVYEA L+++KYLA D FTL D +H     L    P +     ARPHV AW   I +RPA+ K +A +      PLP
Sbjct:   41 HKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPATASAAKLEVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQKTVAAI------PLP 215          
The following BLAST results are available for this feature:
BLAST of CX047530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
GSTF_HYOMU4.396e-5764.50Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF1_ARATH1.670e-5665.48Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GST11_ARATH4.114e-5565.68Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF1_TOBAC1.197e-5460.12Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF2_TOBAC5.941e-5460.12Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF6_ARATH1.324e-5362.64Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF_SILCU1.729e-5363.07Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GST16_ARATH2.583e-4960.47Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF4_ARATH4.871e-4859.06Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GSTF3_MAIZE2.347e-3445.30Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14F12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14F12-L23-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047530 ID=CX047530; Name=CX047530; organism=Citrus sinensis; type=EST; length=804bp
TTTTTTTTTTTTTTTTTACGCAAAATATCTCCAGCTTCGTTTTATTAGGG
TACATAGATAAAATAAAAACCTCAAGCCATCAACATCAAAGTTGAATATG
AGGCAGTGCTGTTGAAATACAAAAGCGGTAGTACAAACTACAAAGCATCA
ATATTCTGCAAAATATTGATGACAAACGCCAAACAAGAAAATACGAACTC
GAAAACCAGCCTAATAGGTATTACAAAAGATAAGTGACCACCGAGGAGCG
ACTAACGTCTAGTAGGTAGCGGGCAGAGTGTTCAGTGTTTGAGCAAGGCA
AGGACCTTAGCCCAAGCCGGTCTGGAAGTGATATCAGCTGCCCATGCGCT
AACATGGGGGCGTGCATCAAACAGCTTCTTGACAGGCGTCCCCAACAACA
AATTAATATTGGGGAGATGATGCAAATCGACCAAGGTGAAGCTGTCGCAC
GCCAAGTATTTGGACTGAGACAAACGGGCCTCGTAAACATCTAAAATTTT
GGCAAGCTTAGCTTCATTTTCTTCAACCGCAGCTGGATCAGTGGTCATTC
CAAACATTGGCTTGTACACGAGCTCCCAGTTGAGCTTCGATGATGGGGGG
TCGAACTGGAGTGCCTCCACCTCCTTCCATACCAATAACGGGGCGATGGG
CTTGCCTGGGCATGTTAACTGGGTGCCTTTGTCTGGAAACTCCTGGGCGG
TGTATTGGGTGATTGCCCTTGATTCGAAGAGCTTCTGGTCGCCGTGTTCA
AGCACCGGAACTTGACCGAATGGATTCAAAGAAAGGAAGGCCTCCTTTTT
GTGT
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