CX047528

Overview
NameCX047528
Unique NameCX047528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047528 vs. ExPASy Swiss-Prot
Match: GPAT5_ARATH (Glycerol-3-phosphate acyltransferase 5 OS=Arabidopsis thaliana GN=GPAT5 PE=1 SV=1)

HSP 1 Score: 390.193 bits (1001), Expect = 8.286e-108
Identity = 195/235 (82.98%), Postives = 205/235 (87.23%), Query Frame = -3
Query:  175 MWAIPYMSRXXXXXXXXXXXXXXXXXXXXXXVLFVCTHRTLMDPVVLSTVLRRKIPAVTYSISRLSEILSPIPTVRLTRIRDVDAEKIKRELSNGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPMFFFMNPRPVYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTVSYTSFVDQIKKVVSTF 879
            +WA PY+S+                      VLFVCTHRTLMDPVVLS VL R IPAVTYSISRLSEILSPIPTVRLTRIRDVDA KIK++LS GDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDP+FFFMNPRPVYE+TFLNQLP+EATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTVSY S +DQ+KKVVSTF
Sbjct:  263 LWATPYVSQIFGGHIIVKGKPPQPPAAGKSGVLFVCTHRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTVRLTRIRDVDAAKIKQQLSKGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNPRPVYEITFLNQLPMEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTVSYLSLLDQLKKVVSTF 497          
BLAST of CX047528 vs. ExPASy Swiss-Prot
Match: GPAT7_ARATH (Glycerol-3-phosphate acyltransferase 7 OS=Arabidopsis thaliana GN=GPAT7 PE=1 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 7.014e-107
Identity = 196/235 (83.40%), Postives = 204/235 (86.81%), Query Frame = -3
Query:  175 MWAIPYMSRXXXXXXXXXXXXXXXXXXXXXXVLFVCTHRTLMDPVVLSTVLRRKIPAVTYSISRLSEILSPIPTVRLTRIRDVDAEKIKRELSNGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPMFFFMNPRPVYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTVSYTSFVDQIKKVVSTF 879
            +WAIPY+SR                      VLFVCTHRTLMDPVVLS VL R IPAVTYSISRLSEILSPIPT RLTRIRDVDAE IK+ELSNGDLVV PEGTTCREPFLLRFSALFAELTD IVPVAMNYRVGFFHATTARGWKGLDP+FFFMNPRPVYEVTFLNQL VEATCSSGKSP+DVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTVSY SF+DQ+KKVV+TF
Sbjct:  261 LWAIPYVSRIFNTRFIVKGKPPAQATTGNPGVLFVCTHRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTFRLTRIRDVDAEMIKKELSNGDLVVYPEGTTCREPFLLRFSALFAELTDNIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNPRPVYEVTFLNQLEVEATCSSGKSPYDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTVSYLSFLDQVKKVVTTF 495          
BLAST of CX047528 vs. ExPASy Swiss-Prot
Match: GPAT6_ARATH (Glycerol-3-phosphate acyltransferase 6 OS=Arabidopsis thaliana GN=GPAT6 PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.636e-71
Identity = 129/187 (68.98%), Postives = 147/187 (78.61%), Query Frame = -3
Query:  223 LFVCTHRTLMDPVVLSTVLRRKIPAVTYSISRLSEILSPIPTVRLTRIRDVDAEKIKRELSNGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPMFFFMNPRPVYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTV 783
            L VC HRT++DPVV +  L RKI  VTYSIS+ SE++SPI  V LTR R+ DA  IKR L  GDLV+CPEGTTCREPFLLRFSALFAELTDRIVPVA+N +   F+ TT RG+K LDP F FMNPRP YE+TFL Q+P E TC  GKSP +VANY+QR+L  TLGFECTNFTRKDKY +LAG DG V
Sbjct:  308 LLVCNHRTVLDPVVTAVALGRKISCVTYSISKFSELISPIKAVALTRQREKDAANIKRLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSMFNGTTTRGYKLLDPYFAFMNPRPTYEITFLKQIPAELTCKGGKSPIEVANYIQRVLGGTLGFECTNFTRKDKYAMLAGTDGRV 494          
BLAST of CX047528 vs. ExPASy Swiss-Prot
Match: GPAT4_ARATH (Glycerol-3-phosphate acyltransferase 4 OS=Arabidopsis thaliana GN=GPAT4 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 5.622e-64
Identity = 119/188 (63.30%), Postives = 145/188 (77.13%), Query Frame = -3
Query:  223 LFVCTHRTLMDPVVLSTVLRRKIPAVTYSISRLSEILSPIPTVRLTRIRDVDAEKIKRELSNGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPMFFFMNPRPVYEVTFLNQLPVEATCS-SGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTV 783
            L+V  HRT +DP++++  L RKI  VTYS+SRLS +LSPIP V LTR R  DA ++++ L  GDLV+CPEGTTCREP+LLRFSALFAEL+DRIVPVAMN + G F+ TT RG K  DP FFFMNPRP YE TFL++LP E T +  GK+P +VANYVQ+++   LGFECT  TRKDKY +L GNDG V
Sbjct:  306 LYVLNHRTALDPIIIAIALGRKITCVTYSVSRLSLMLSPIPAVALTRDRVADAARMRQLLEKGDLVICPEGTTCREPYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKFWDPYFFFMNPRPSYEATFLDRLPEEMTVNGGGKTPFEVANYVQKVIGGVLGFECTELTRKDKYLLLGGNDGKV 493          
BLAST of CX047528 vs. ExPASy Swiss-Prot
Match: GPAT8_ARATH (Probable glycerol-3-phosphate acyltransferase 8 OS=Arabidopsis thaliana GN=GPAT8 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 6.216e-63
Identity = 119/188 (63.30%), Postives = 144/188 (76.60%), Query Frame = -3
Query:  223 LFVCTHRTLMDPVVLSTVLRRKIPAVTYSISRLSEILSPIPTVRLTRIRDVDAEKIKRELSNGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPMFFFMNPRPVYEVTFLNQLPVEATCS-SGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTV 783
            L+V  HRT +DP++++  L RKI  VTYS+SRLS +LSPIP V LTR R  DA  +++ L  GDLV+CPEGTTCRE +LLRFSALFAEL+DRIVPVAMN + G F+ TT RG K  DP FFFMNPRP YE TFL++LP E T +  GK+P +VANYVQ+++ A LGFECT  TRKDKY +L GNDG V
Sbjct:  305 LYVLNHRTALDPIIVAIALGRKICCVTYSVSRLSLMLSPIPAVALTRDRATDAANMRKLLEKGDLVICPEGTTCREEYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKFWDPYFFFMNPRPSYEATFLDRLPEEMTVNGGGKTPIEVANYVQKVIGAVLGFECTELTRKDKYLLLGGNDGKV 492          
BLAST of CX047528 vs. ExPASy Swiss-Prot
Match: GPAT1_ARATH (Glycerol-3-phosphate acyltransferase 1 OS=Arabidopsis thaliana GN=GPAT1 PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 5.262e-62
Identity = 117/187 (62.57%), Postives = 143/187 (76.47%), Query Frame = -3
Query:  223 LFVCTHRTLMDPVVLSTVLRRKIPAVTYSISRLSEILSPIPTVRLTRIRDVDAEKIKRELSNGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPMFFFMNPRPVYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTV 783
            L+VC HRTL+DPV L+T L + + AVTYS+S+ SE ++P+ TV L R R  D E ++R LS GDLVVCPEGTTCREP+LLRFS LFAELT+ IVPVA++ RV  F+ TTA G K LDP+FF MNPRPVY +  L +LP E TC+ GKS  +VAN++Q  LA  LGFECTN TR+DKY VLAGN+G V
Sbjct:  398 LYVCNHRTLLDPVFLTTSLGKPLTAVTYSLSKFSEFIAPLKTVSLKRDRKKDGEAMQRLLSKGDLVVCPEGTTCREPYLLRFSPLFAELTEDIVPVAVDARVSMFYGTTASGLKCLDPIFFLMNPRPVYCLEILKKLPKEMTCAGGKSSFEVANFIQGELARVLGFECTNLTRRDKYLVLAGNEGIV 584          
BLAST of CX047528 vs. ExPASy Swiss-Prot
Match: GPAT2_ARATH (Probable glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=GPAT2 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.063e-54
Identity = 113/196 (57.65%), Postives = 141/196 (71.94%), Query Frame = -3
Query:  223 LFVCTHRTLMDPVVLSTVLRRK-IPAVTYSISRLSEILSPIPTVRLTRIRDVDAEKIKRELSNGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPMFFFMNPRPVYEVTFLNQLPVEATCSS--------GKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTV 783
            LFVC HRTL+DP+ +S  LR+K + AVTYS+SRLSE+L+PI TVRLTR R  D + +++ LS GDLVVCPEGTTCREP+LLRFS LF+E+ D IVPVA++  V FF+ TTA G K  DP+FF +NP P Y V  L+  PV  + SS        GK   +VAN+VQ  +   LGFECTN TR+DKY +LAGN+G V
Sbjct:  334 LFVCNHRTLLDPLYISYALRKKNMKAVTYSLSRLSELLAPIKTVRLTRDRVKDGQAMEKLLSQGDLVVCPEGTTCREPYLLRFSPLFSEVCDVIVPVAIDSHVTFFYGTTASGLKAFDPIFFLLNPFPSYTVKLLD--PVSGSSSSTCRGVPDNGKVNFEVANHVQHEIGNALGFECTNLTRRDKYLILAGNNGVV 527          
BLAST of CX047528 vs. ExPASy Swiss-Prot
Match: GPAT3_ARATH (Probable glycerol-3-phosphate acyltransferase 3 OS=Arabidopsis thaliana GN=GPAT3 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.997e-54
Identity = 111/191 (58.12%), Postives = 139/191 (72.77%), Query Frame = -3
Query:  223 LFVCTHRTLMDPVVLSTVLRRK-IPAVTYSISRLSEILSPIPTVRLTRIRDVDAEKIKRELSNGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPMFFFMNPRPVYEVTFLNQLPVE-ATCS--SGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTV 783
            LFVC HRTL+DP+ ++  LR+K I  VTYS+SR+SEIL+PI TVRLTR R  D + +++ L+ GDLVVCPEGTTCREP+LLRFS LF E++D IVPVA+   V FF+ TTA G K LDP+FF ++P P Y + FL+  PV  ATC    GK   +VAN VQ  +   L FECT+ TRKDKY +LAGN+G V
Sbjct:  329 LFVCNHRTLLDPLYVAFALRKKNIKTVTYSLSRVSEILAPIKTVRLTRDRVSDGQAMEKLLTEGDLVVCPEGTTCREPYLLRFSPLFTEVSDVIVPVAVTVHVTFFYGTTASGLKALDPLFFLLDPYPTYTIQFLD--PVSGATCQDPDGKLKFEVANNVQSDIGKALDFECTSLTRKDKYLILAGNNGVV 517          
The following BLAST results are available for this feature:
BLAST of CX047528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
GPAT5_ARATH8.286e-10882.98Glycerol-3-phosphate acyltransferase 5 OS=Arabidop... [more]
GPAT7_ARATH7.014e-10783.40Glycerol-3-phosphate acyltransferase 7 OS=Arabidop... [more]
GPAT6_ARATH3.636e-7168.98Glycerol-3-phosphate acyltransferase 6 OS=Arabidop... [more]
GPAT4_ARATH5.622e-6463.30Glycerol-3-phosphate acyltransferase 4 OS=Arabidop... [more]
GPAT8_ARATH6.216e-6363.30Probable glycerol-3-phosphate acyltransferase 8 OS... [more]
GPAT1_ARATH5.262e-6262.57Glycerol-3-phosphate acyltransferase 1 OS=Arabidop... [more]
GPAT2_ARATH1.063e-5457.65Probable glycerol-3-phosphate acyltransferase 2 OS... [more]
GPAT3_ARATH8.997e-5458.12Probable glycerol-3-phosphate acyltransferase 3 OS... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_14F11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14F11-L21-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047528 ID=CX047528; Name=CX047528; organism=Citrus sinensis; type=EST; length=881bp
TTTTTTTTTTTTTTTTTAATCGAAAAACAAAAAGAATAAATACAACACAA
TTTCCACCTTTTTACAAAACGAAACCAAACATTCCCACAAATCAATTCAT
CATCATGAATTAATCAACACAAAAATTAAAATCTTAATTATTCTCATCTC
ATCTTATAATTGATCTCAGTGAATAAACGTGCTCACCACCTTTTTAATTT
GATCAACGAACGAGGTATACGACACCGTTCCATCATTGCCTGCAAGCACC
CTGTACTTGTCCTTCCTCGTAAAGTTTGTGCACTCAAAGCCTAAAGTAGC
AGCCAAGATTCTTTGAACGTAATTTGCCACGTCATGTGGGCTCTTACCGG
AGGAACAAGTTGCTTCCACCGGCAACTGGTTCAAGAACGTCACCTCATAA
ACTGGCCTAGGGTTCATGAAGAAGAACATTGGGTCCAAGCCTTTCCAGCC
TCTAGCCGTAGTTGCATGAAAAAACCCTACTCTGTAGTTCATGGCTACAG
GCACTATCCGGTCGGTTAATTCAGCGAATAGGGCACTGAATCTTAATAAA
AATGGTTCTCTACAAGTTGTGCCCTCAGGACAAACCACTAGGTCACCGTT
TGATAGTTCTCTTTTGATTTTTTCGGCATCAACATCACGAATTCTAGTTA
ATCTAACGGTGGGGATTGGAGATAGTATTTCTGATAATCTTGAAATGGAG
TATGTGACAGCTGGGATTTTGCGCCTTAGTACGGTGGATAATACGACGGG
GTCCATAAGTGTTCGGTGGGTACATACAAAGAGAACGCCGGTGCTGCTGC
CGGAGACAGGTGGTGGGGGCTTTCCTTTTACAATGATCTTGCCTCCAAAT
ATTCGGGACATGTAAGGTATTGCCCACATCG
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