CX047527

Overview
NameCX047527
Unique NameCX047527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047527 vs. ExPASy Swiss-Prot
Match: GPAT7_ARATH (Glycerol-3-phosphate acyltransferase 7 OS=Arabidopsis thaliana GN=GPAT7 PE=1 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 5.687e-79
Identity = 157/268 (58.58%), Postives = 188/268 (70.15%), Query Frame = 2
Query:   44 IEMIMETSSSVVSEFEGTLLKDPDPFSYFMLVAFEASGLIRFAXXXXXXXXXXXXXXXXXXXXXXKMMIFVATAGLRMIEIESVARAVLPKFYMDDIDMEAWRVFSSCDKRVVVTKTPRVLVERFVKEHLRADEVIGSELLVNRFGFATGFVQGDFA--SIFSRAAKMFVDEKPTLGLGR--ASDS-SFLSLCKEQMHPPFITNLKHHHDHQVLRPLPVIFHDGRLVKRPTPSTAXXXXXXXXXXXXXAVIRIVIGLILPMWAIPYMS 832
            +E    TS SVVSE EGTLLK+P PF+YFMLVAFEASGLIRFA                      K+MIFVATAGL   EIESVARAVLPKF+MDDI M+AWR F SCDKRVVVT+ PRV+VERF K+HL ADEVIG+E++VNRFG+ATG +Q      S+F+  A +FVD +P LGLGR   SDS +FLSLC+EQ+H P  +N   H+    ++PLPVIFHDGRLVK PTP+TA             A+IRI +G +LP+WAIPY+S
Sbjct:    1 MESSTTTSYSVVSELEGTLLKNPKPFAYFMLVAFEASGLIRFATLLFLWPIIALLDVLGYRNGSLKLMIFVATAGLHESEIESVARAVLPKFFMDDISMDAWRAFGSCDKRVVVTRMPRVMVERFAKDHLSADEVIGTEIVVNRFGYATGLIQETNVDQSVFNSVANLFVDRRPQLGLGRHIISDSPTFLSLCEEQVHAPVPSNYNGHNQRLHVQPLPVIFHDGRLVKLPTPATALIILLWIPFGIILAMIRIFVGFLLPLWAIPYVS 268          
BLAST of CX047527 vs. ExPASy Swiss-Prot
Match: GPAT5_ARATH (Glycerol-3-phosphate acyltransferase 5 OS=Arabidopsis thaliana GN=GPAT5 PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.401e-77
Identity = 156/270 (57.78%), Postives = 183/270 (67.78%), Query Frame = 2
Query:   50 MIME----TSSSVVSEFEGTLLKDPDPFSYFMLVAFEASGLIRFAXXXXXXXXXXXXXXXXXXXXXXKMMIFVATAGLRMIEIESVARAVLPKFYMDDIDMEAWRVFSSCDKRVVVTKTPRVLVERFVKEHLRADEVIGSELLVNRFGFATGFVQGDFA--SIFSRAAKMFVDEKPTLGLGR---ASDSSFLSLCKEQMHPPFITNLKHHHDHQVLRPLPVIFHDGRLVKRPTPSTAXXXXXXXXXXXXXAVIRIVIGLILPMWAIPYMS 832
            M+ME    TS SVVSEFEGT+LK+ D FSYFMLVAFEA+GLIRFA                      K+ IFVAT GLR  EIESVARAVLPKFYMDD+ M+ WRVFSSC KRVVVT+ PRV+VERF KEHLRADEVIG+EL+VNRFGF TG ++      S  +R A +FV  +P LGLG+    + ++FLSLC+E +H P   N  H      LRPLPVIFHDGRLVKRPTP+TA             AVIRI +G +LP+WA PY+S
Sbjct:    1 MVMEQAGTTSYSVVSEFEGTILKNADSFSYFMLVAFEAAGLIRFAILLFLWPVITLLDVFSYKNAALKLKIFVATVGLREPEIESVARAVLPKFYMDDVSMDTWRVFSSCKKRVVVTRMPRVMVERFAKEHLRADEVIGTELIVNRFGFVTGLIRETDVDQSALNRVANLFVGRRPQLGLGKPALTASTNFLSLCEEHIHAPIPENYNHGDQQLQLRPLPVIFHDGRLVKRPTPATALIILLWIPFGIILAVIRIFLGAVLPLWATPYVS 270          
BLAST of CX047527 vs. ExPASy Swiss-Prot
Match: GPAT8_ARATH (Probable glycerol-3-phosphate acyltransferase 8 OS=Arabidopsis thaliana GN=GPAT8 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.267e-34
Identity = 96/258 (37.21%), Postives = 139/258 (53.88%), Query Frame = 2
Query:   71 SVVSEFEGTLLKDPDPFSYFMLVAFEASGLIRFAXXXXXXXXXXXXXXXXXXXXXXKMMIFVATAGLRMIEIESVARAVLPKFYMDDIDMEAWRVFSSCDKRVVVTKTPRVLVERFVKEHLRADEVIGSELLVN-RFGFATGFVQ--GDFASIFSRAA--KMFVDEKPTLGLG-RASDSSFLSLCKEQMHPPFITNLKHHHDHQVLRPLPVIFHDGRLVKRPTPSTAXXXXXXXXXXXXXAVIRIVIGLILPMWAIPY 826
            S+ ++ +GTLL     F YFMLVA EA  L+R                        +++IF++ AGL++ +IE V+RAVLP+FY  D+  +++ VF  C ++VVVT  P V+VE FVK++L  D+V+G+E+ VN +   ATGFV+  G       R A  K F +E P LGLG R SD  F+SLCK+  +    T        + L+   ++FHDGRL +RPTP  A             ++IR+   L LP   + Y
Sbjct:   23 SIAADLDGTLLLSRSSFPYFMLVAVEAGSLLRGLILLLSLPFVIISYLFVSESLGIQILIFISFAGLKIRDIELVSRAVLPRFYAADVRKDSFEVFDKCKRKVVVTANPIVMVEAFVKDYLGGDKVLGTEIEVNPKTNRATGFVKKPGVLVGDLKRLAILKEFGNESPDLGLGDRTSDHDFMSLCKKG-YMVHATKSATTIPKERLKN-RIVFHDGRLAQRPTPLNAIITYLWLPFGFILSIIRVYFNLPLPERFVRY 278          
BLAST of CX047527 vs. ExPASy Swiss-Prot
Match: GPAT6_ARATH (Glycerol-3-phosphate acyltransferase 6 OS=Arabidopsis thaliana GN=GPAT6 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.766e-33
Identity = 87/275 (31.64%), Postives = 144/275 (52.36%), Query Frame = 2
Query:    8 KKKKREKPDQETIEMIMETSSSVVSEFEGTLLKDPDPFSYFMLVAFEASGLIRFAXXXXXXXXXXXXXXXXXXXXXXKMMIFVATAGLRMIEIESVARAVLPKFYMDDIDMEAWRVFSSCDKRVVVTKTPRVLVERFVKEHLRADEVIGSELLVNRFGFATGFVQ--GDFASIFSRAAKM-----FVDEKPTLGLGRA-SDSSFLSLCKEQMHPPFITNLKHHHDHQVLRPLPVIFHDGRLVKRPTPSTAXXXXXXXXXXXXXAVIRIVIGLILP 808
            ++K+R        ++   ++ +V ++ +GTLL     F Y+ LVA EA  L+R                         + +F+  AGL++ ++E V R+VLP+FY +D+  + WR+F++  KR ++T +PR++VE FVK  L  D+V+G+EL V++ G ATGF +  G     + R   +        + P LGLG + +D  F+S+CKE    P  T  +    +++L   P+IFH+GRLV+RPTP  A             ++IR+   + LP
Sbjct:    4 QEKRRRFEQISKCDVKDRSNHTVAADLDGTLLISRSAFPYYFLVALEAGSLLRALILLVSVPFVYLTYLTISETLAINVFVFITFAGLKIRDVELVVRSVLPRFYAEDVRPDTWRIFNTFGKRYIITASPRIMVEPFVKTFLGVDKVLGTELEVSKSGRATGFTRKPGILVGQYKRDVVLREFGGLASDLPDLGLGDSKTDHDFMSICKEGYMVP-RTKCEPLPRNKLLS--PIIFHEGRLVQRPTPLVALLTFLWLPVGFVLSIIRVYTNIPLP 275          
BLAST of CX047527 vs. ExPASy Swiss-Prot
Match: GPAT4_ARATH (Glycerol-3-phosphate acyltransferase 4 OS=Arabidopsis thaliana GN=GPAT4 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.161e-33
Identity = 98/264 (37.12%), Postives = 135/264 (51.14%), Query Frame = 2
Query:   71 SVVSEFEGTLLKDPDPFSYFMLVAFEASGLIRFAXXXXXXXXXXXXXXXXXXXXXXKMMIFVATAGLRMIEIESVARAVLPKFYMDDIDMEAWRVFSSCDKR-VVVTKTPRVLVERFVKEHLRADEVIGSELLVN-RFGFATGFVQ--GDFASIFSRAA--KMFVDEKPTLGLG-RASDSSFLSLCKEQMHPPFITNLKHHHDHQVLRPLP-----VIFHDGRLVKRPTPSTAXXXXXXXXXXXXXAVIRIVIGLILPMWAIPY 826
            S+ ++ +GTLL     F YFMLVA EA  L R                        +++IF++ AG+++  IE V+RAVL +FY  D+  +++ VF  C KR VVVT  P V+VE FVK++L  D+V+G+E+ VN +   ATGFV+  G       R A  K F D+ P LGLG R SD  F+S+CKE         + H        P+      +IFHDGRLV+RPTP  A             +V R+   L LP   + Y
Sbjct:   23 SIAADLDGTLLLSRSSFPYFMLVAIEAGSLFRGLILLLSLPIVIIAYLFVSESLGIQILIFISFAGIKIKNIELVSRAVLTRFYAADVRKDSFEVFDKCKKRKVVVTANPIVMVEPFVKDYLGGDKVLGTEIEVNPKTMKATGFVKKPGVLVGDLKRLAILKEFGDDSPDLGLGDRTSDHDFMSICKEGY-------MVHETKSATTVPIESLKNRIIFHDGRLVQRPTPLNALIIYLWLPFGFMLSVFRVYFNLPLPERFVRY 279          
BLAST of CX047527 vs. ExPASy Swiss-Prot
Match: GPAT1_ARATH (Glycerol-3-phosphate acyltransferase 1 OS=Arabidopsis thaliana GN=GPAT1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.507e-26
Identity = 82/241 (34.02%), Postives = 128/241 (53.11%), Query Frame = 2
Query:  119 FSYFMLVAFEASGLIRFAXXXXXXXXXXXXXXXXXXXXXXKMMIFVATAGLRMIEIESVARAVLPKFYMDDIDMEAWRVFSSCD-KRVVVTKTPRVLVERFVKEHLRADEVIGS---ELLVNRFGFATGFVQGD-FASIFSRAAKMFVD--EKPTLGLGRAS---DSSFLSLCKEQMHPPFITNL-KHHHDHQVLRPLPVIFHDGRLVKRPTPSTAXXXXXXXXXXXXXAVIRIVIGLILP 808
            F YFMLVAFE   +IR                        +++ F+  +GLR+ ++++V+R+VLPKF++++++++ + +++  +  +VV T  P+VLVERF++EHL AD+VIG+   E+ V    F TG   G  F      A   F D  +KP LG+G +S   D  F+S+CKE        ++ K++   +   P P+IFHDGRL   PTP                AV RI +G+ LP
Sbjct:  127 FPYFMLVAFEGGSIIR----AILLLLSCSFLWTLQQETKLRVLSFITFSGLRVKDMDNVSRSVLPKFFLENLNIQVYDIWARTEYSKVVFTSLPQVLVERFLREHLNADDVIGTKLQEIKVMGRKFYTGLASGSGFVLKHKSAEDYFFDSKKKPALGIGSSSSPQDHIFISICKEAYFWNEEESMSKNNALPRERYPKPLIFHDGRLAFLPTPLATLAMFIWLPIGFLLAVFRISVGVFLP 363          
BLAST of CX047527 vs. ExPASy Swiss-Prot
Match: GPAT2_ARATH (Probable glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=GPAT2 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.614e-19
Identity = 77/278 (27.70%), Postives = 129/278 (46.40%), Query Frame = 2
Query:   11 KKKREKPDQETIEMIMETSS-SVVSEFEGTLLKDPDPFSYFMLVAFEASGLIRFAXXXXXXXXXXXXXXXXXXXXXXKMMIFVATAGLRMIEIESVARAVLPKFYMDDIDMEAWRVFSSCDKRVVVTKTPRVLVERFVKEHLRADEVIGSELLVNRFGFATGFVQGDFASIFSRAAKMFVDEKPTLGLGRA-------SDSSFLSLCKEQMHPPFITNLKHHHDHQVL----RPLPVIFHDGRLVKRPTPSTAXXXXXXXXXXXXXAVIRIVIGLILP 808
            K+K +K     +    + S+ +++   EG LLK    F YFM+VAFEA G+IR                        K M+ ++  G++  E   V ++VLPK++++D+ +E ++V     KRV V+  P+V+++ F++++L  + V+G ++ +   G+  G V+ D  ++     K+  +E+  LG GR        +  S  SL  +     +          Q L     P P+IFHDGRL  +PTP                A  R+V GL LP
Sbjct:   31 KQKYQKCPSHGLHQYQDLSNHTLIFNVEGALLKSNSLFPYFMVVAFEAGGVIR----SLFLLVLYPFISLMSYEMGLKTMVMLSFFGVKK-ESFRVGKSVLPKYFLEDVGLEMFQVLKRGGKRVAVSDLPQVMIDVFLRDYLEIEVVVGRDMKMVG-GYYLGIVE-DKKNLEIAFDKVVQEER--LGSGRRLIGITSFNSPSHRSLFSQFCQEIYFVRNSDKKSWQTLPQDQYPKPLIFHDGRLAVKPTPLNTLVLFMWAPFAAVLAAARLVFGLNLP 299          
BLAST of CX047527 vs. ExPASy Swiss-Prot
Match: GPAT3_ARATH (Probable glycerol-3-phosphate acyltransferase 3 OS=Arabidopsis thaliana GN=GPAT3 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.991e-15
Identity = 74/262 (28.24%), Postives = 113/262 (43.13%), Query Frame = 2
Query:   71 SVVSEFEGTLLKDPDPFSYFMLVAFEASGLIRFAXXXXXXXXXXXXXXXXXXXXXXKMMIFVATAGLRMIEIESVARAVLPKFYMDDIDMEAWRVFSSCDKRVVVT-KTPRVLVERFVKEHLRADEVIGSELLVNRFGFATGFVQGDFASIFSRAAK--MFVDE---KPTLGLGRA-SDSSFLSLCKEQMHPPFITNL-----KHHHDHQVL----RPLPVIFHDGRLVKRPTPSTAXXXXXXXXXXXXXAVIRIVIGLILP 808
            +++   EG LLK    F YFMLVAFEA G+IR                        K+M+ V+  G++  E     RAVLPK++++D+ +E + V     K++ V+   P+V++E F++++L  D V+G E+ V         V G +  I     K  +  DE   K  L  GR    +SF +     +   F   +           Q L     P P+IFHDGRL  +PT                 A  R+ + L +P
Sbjct:   46 TLIFNVEGALLKSDSLFPYFMLVAFEAGGVIR----SFLLFILYPLISLMSHEMGVKVMVMVSFFGIKK-EGFRAGRAVLPKYFLEDVGLEMFEVLKRGGKKIGVSDDLPQVMIEGFLRDYLEIDVVVGREMKV---------VGGYYLGIMEDKTKHDLVFDELVRKERLNTGRVIGITSFNTSLHRYLFSQFCQEIYFVKKSDKRSWQTLPRSQYPKPLIFHDGRLAIKPTLMNTLVLFMWGPFAAAAAAARLFVSLCIP 293          
The following BLAST results are available for this feature:
BLAST of CX047527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
GPAT7_ARATH5.687e-7958.58Glycerol-3-phosphate acyltransferase 7 OS=Arabidop... [more]
GPAT5_ARATH1.401e-7757.78Glycerol-3-phosphate acyltransferase 5 OS=Arabidop... [more]
GPAT8_ARATH3.267e-3437.21Probable glycerol-3-phosphate acyltransferase 8 OS... [more]
GPAT6_ARATH2.766e-3331.64Glycerol-3-phosphate acyltransferase 6 OS=Arabidop... [more]
GPAT4_ARATH6.161e-3337.12Glycerol-3-phosphate acyltransferase 4 OS=Arabidop... [more]
GPAT1_ARATH2.507e-2634.02Glycerol-3-phosphate acyltransferase 1 OS=Arabidop... [more]
GPAT2_ARATH6.614e-1927.70Probable glycerol-3-phosphate acyltransferase 2 OS... [more]
GPAT3_ARATH1.991e-1528.24Probable glycerol-3-phosphate acyltransferase 3 OS... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_14F11_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14F11-L21-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047527 ID=CX047527; Name=CX047527; organism=Citrus sinensis; type=EST; length=834bp
AAAATTAAAAAAAAAAAAAAGAGAGAAACCAGATCAAGAAACAATAGAAA
TGATAATGGAAACATCATCATCAGTAGTTTCGGAGTTTGAAGGGACTCTA
TTGAAGGATCCTGATCCCTTCTCTTACTTCATGTTAGTAGCATTTGAGGC
TTCGGGTTTGATTCGGTTTGCGTTGTTGTTGATACTGTGGCCGGTGATTC
GGTTGCTGGATGCATTAGGGTTTGGGGATGCGGGGCTTAAAATGATGATA
TTTGTTGCGACGGCGGGTTTGAGGATGATTGAGATTGAATCGGTGGCGAG
GGCCGTGTTGCCCAAGTTTTATATGGATGATATTGATATGGAGGCATGGA
GAGTATTTAGCTCGTGTGATAAGAGAGTGGTGGTGACGAAGACGCCTAGG
GTTTTGGTGGAGAGGTTTGTGAAGGAGCATTTGCGTGCCGATGAAGTTAT
TGGAAGCGAGCTTTTGGTGAACCGATTTGGATTCGCCACTGGGTTTGTTC
AAGGAGACTTTGCTTCCATCTTTAGCCGAGCCGCTAAAATGTTTGTTGAC
GAAAAACCTACGTTAGGCTTAGGAAGAGCTTCGGATTCTTCATTCTTATC
TCTATGCAAGGAACAAATGCATCCGCCATTTATCACCAACCTGAAGCATC
ATCATGACCACCAAGTCCTCCGCCCGTTGCCGGTGATCTTCCACGATGGC
CGTCTTGTGAAGCGCCCAACGCCTTCAACGGCTCTCCTAATCCTCCTATG
GATGCCATTAGGGATTTTACTAGCGGTAATCCGAATCGTCATCGGCCTAA
TATTACCGATGTGGGCAATACCCTACATGTCCCG
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