CX047515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047515 vs. ExPASy Swiss-Prot
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.453e-29 Identity = 64/163 (39.26%), Postives = 98/163 (60.12%), Query Frame = -2 Query: 350 DDV*RIWELYKKAVKVLNNGYRNVISSLLKLDDLESAEKIFEEWESQALCYDTRIPNFLIDVYCRNGLLEKAENLINHEKLKGREIHVKSWYYLATGYRQSNQIHKAVEAMKKVLAAYQTLVKWKPSVESLAACLDYFKDEGDIGGAENFIELLNDKGFIPTD 838 ++V R+W LYK+ N GY +VIS+LLK+DD+E EKI EEWE+ +D RIP+ LI YC+ G++EKAE ++N K R +W LA GY+ + ++ KAVE K+ + + W+P L +C+DY + + D+ G + LL+++G I D Sbjct: 298 EEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSKP--GWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHISYD 458
BLAST of CX047515 vs. ExPASy Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.480e-23 Identity = 67/197 (34.01%), Postives = 107/197 (54.31%), Query Frame = -2 Query: 257 DV*RIWELYKKAV-KVLNNGYRNVISSLLKLDDLESAEKIFEEWESQALCYDTRIPNFLIDVYCRNGLLEKAENLINHEKLKGREIHVKSWYYLATGYRQSNQIHKAVEAMKKVLAAYQ-TLVKWKPSVESLAACLDYFKDEGDIGGAENFIELL-NDKGFIPTDLQDKLLDN-VRNGKSNLETLRELYGNSLAGNE 835 +V RIW + A+ K N Y N+I L+KL+DL AE +F+EW++ YD RI N LI Y + GL++KA L +G +++ K+W Y +S + +A+E M K ++ + KW PS E++ A + YF+ + D+ GAEN +E+L N I ++ + L+ GKS+ R L ++ NE Sbjct: 282 EVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNE 478
BLAST of CX047515 vs. ExPASy Swiss-Prot
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 4.954e-22 Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = -2 Query: 338 RIWELYKKAVKVLNN-GYRNVISSLLKLDDLESAEKIFEEWESQALCYDTRIPNFLIDVYCRNGLLEKAENLINHEKLKGREIHVKSWYYLATGYRQSNQIHKAVEAMKKVLAAYQTLVKWKPSVESLAACLDYFKDEGDIGGAENFIELLNDKGFIPTDLQDK 826 R+W +YK V + N GY ++SSL+++ D+E AEK++EEW YD RIPN L++ Y +N LE AE L +H G + +W LA G+ + I +A+ ++ +A + W+P V L+ ++E D+ E +ELL G DL+DK Sbjct: 331 RVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALTCLRNAFSA-EGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSG----DLEDK 489
BLAST of CX047515 vs. ExPASy Swiss-Prot
Match: PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana GN=At4g21705 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.882e-21 Identity = 57/183 (31.15%), Postives = 95/183 (51.91%), Query Frame = -2 Query: 293 DV*RIWELYKKAVKV-LNNGYRNVISSLLKLDDLESAEKIFEEWESQALCYDTRIPNFLIDVYCRNGLLEKAENLINHEKLKGREIHVKSWYYLATGYRQSNQIHKAVEAMKKVLAAYQTLVKWKPSVESLAACLDYFKDEGDIGGAENFIELLNDKGFIPTDLQDKLLD-NVRNGKSNLETL 835 +V R+W+L K K +N Y V+ SL+K+D L AE++ EW+S CYD R+PN +I Y + EKAE ++ +G+ +SW +AT Y + + A + MK L KW+P + + + L + DEG + E+F+ L + + + L+ ++R G N++TL Sbjct: 285 EVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTL 467
BLAST of CX047515 vs. ExPASy Swiss-Prot
Match: PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana GN=At5g27460 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.301e-19 Identity = 58/170 (34.12%), Postives = 89/170 (52.35%), Query Frame = -2 Query: 332 DDV*RIWELYKKAV-KVLNNGYRNVISSLLKLDDLESAEKIFEEWESQALCYDTRIPNFLIDVYCRNGLLEKAENLINHEKLKGREIHVKSWYYLATGYRQSNQIHKAVEAMKKVLAAYQTLVKWKPSVESLAACLDYFKDEGDIGGAENFIELLNDKGFIPTDLQDKLL 838 + V R+WE+ K ++ Y V+SSL+K DLE AE++F EWE+Q YD R+ N L+ Y RNG + KAE+L +G + K+W L G+ + + KA++AM +V + W+PS + A +YF+ E I A ++ L+ G L LL Sbjct: 301 EGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRR-CHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLASLPLYRLLL 469
BLAST of CX047515 vs. ExPASy Swiss-Prot
Match: PPR61_ARATH (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana GN=At1g28020 PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 1.000e-14 Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = -2 Query: 578 DDV*RIWELYKKAVKVL-NNGYRNVISSLLKLDDLESAEKIFEEWESQALCYDTRIPNFLIDVYCRNGLLEKAENLINHEKLKGREIH 838 ++V R+W+LYK + NNGYR VI SLLK+DD+ AE+I++ WES L +D RIP L Y G+ EKAE L+N + +K R ++ Sbjct: 297 EEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMNSKTIKDRRMN 384
BLAST of CX047515 vs. ExPASy Swiss-Prot
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana GN=At4g02820 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14 Identity = 46/170 (27.06%), Postives = 82/170 (48.24%), Query Frame = -2 Query: 332 DDV*RIWELYKKAVKVLNNG-YRNVISSLLKLDDLESAEKIFEEWESQALCYDTRIPNFLIDVYCRNGLLEKAENLINHEKLKGREIHVKSWYYLATGYRQSNQIHKAVEAMKKVLAAYQTLVKWKPSVESLAACLDYFKDEGDIGGAENFIELLNDKGFIPTDLQDKLL 838 D V W+ K + K +N+ Y ++IS+++KL + E A+ +++EWES + D RIPN ++ Y + E KG +W L Y + + K ++ K A ++ KW +V + +++G++ GAE + LL G++ T L + LL Sbjct: 318 DGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGK---AIDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLL 484
BLAST of CX047515 vs. ExPASy Swiss-Prot
Match: PPR4_ARATH (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana GN=At1g02370 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.887e-13 Identity = 51/198 (25.76%), Postives = 102/198 (51.52%), Query Frame = -2 Query: 251 DV*RIWELYKKAVKVLNN-GYRNVISSLLKLDDLESAEKIFEEWESQALCYDTRIPNFLIDVYCRNGLLEKAENLINHEKLKGREIHVKSWYYLATGYRQSNQIHKAVEAMKKVLA-AYQTLVKWKPSVESLAACLDYFKDEGDIGGAENFIELLNDKGFIPTDLQDKLLDNVRNGKSNLETLRE-LYGNSLAGNEEI 835 +V R+WE KKA +NN Y ++ ++ KL DL+ +KIF EWES+ YD R+ N I+ Y + + E+AE +++ K + K+ L ++++ A++ ++ ++ + + +W S E ++ +F+ D+ GAE+F ++L++ + ++ L+ + +RE L + +EEI Sbjct: 331 EVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKPLDSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEI 528
BLAST of CX047515 vs. ExPASy Swiss-Prot
Match: PP300_ARATH (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana GN=At4g01990 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.364e-13 Identity = 46/154 (29.87%), Postives = 78/154 (50.65%), Query Frame = -2 Query: 377 DV*RIWELYKKAVKVLNNG-YRNVISSLLKLDDLESAEKIFEEWESQALCYDTRIPNFLIDVYCRNGLLEKAENLINHEKLKGREIHVKSWYYLATGYRQSNQIHKAVEAMKKVLAAYQTLVKWKPSVESLAACLDYFKDEGDIGGAENFIELL 835 +V R+W+L KK +NN Y ++ +L KLDD++ +K+F EWES YD R+ N I Y + + E+AE + N K + K+ L +++Q A++ + A W S E +++ +F++ D+ GAE F + L Sbjct: 299 EVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFE--AAVLDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTL 450 The following BLAST results are available for this feature:
BLAST of CX047515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047515 ID=CX047515; Name=CX047515; organism=Citrus sinensis; type=EST; length=839bpback to top |