CX047502

Overview
NameCX047502
Unique NameCX047502
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047502 vs. ExPASy Swiss-Prot
Match: UBXN7_PONAB (UBX domain-containing protein 7 OS=Pongo abelii GN=UBXN7 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.814e-34
Identity = 84/247 (34.01%), Postives = 124/247 (50.20%), Query Frame = 3
Query:  144 QSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANPGPEENSVTAGQEIGDEVRAPLPVVRDTLYDDAMFYAGSGARYPHHEPSSLIAFRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSW 884
            + ++  F  I  G +       L+A +  L+ A+ +F  G   G IA    + +  ++   P            +EVRAP+P  ++ L +    +     R P    S    FR+F  E  R    E E       D     LA L+RPP  LM  GSFE AK+   +Q+KWL++N+Q+ ++F+   LNRD W+NEAV   I  +FIFWQVY D+ EG++   +YKL   P V ++DP TGQK+  W
Sbjct:   14 KGLIQQFTTIT-GASESVGKHMLEACNNNLEMAVTMFLDG---GGIAEEPSTSSASVSTVRPHTE---------EEVRAPIPQKQEILVEPEPLFGAPKRRRPAR--SIFDGFRDFQTETIRQ---EQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEW 242          
BLAST of CX047502 vs. ExPASy Swiss-Prot
Match: UBXN7_HUMAN (UBX domain-containing protein 7 OS=Homo sapiens GN=UBXN7 PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.814e-34
Identity = 84/247 (34.01%), Postives = 124/247 (50.20%), Query Frame = 3
Query:  144 QSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANPGPEENSVTAGQEIGDEVRAPLPVVRDTLYDDAMFYAGSGARYPHHEPSSLIAFRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSW 884
            + ++  F  I  G +       L+A +  L+ A+ +F  G   G IA    + +  ++   P            +EVRAP+P  ++ L +    +     R P    S    FR+F  E  R    E E       D     LA L+RPP  LM  GSFE AK+   +Q+KWL++N+Q+ ++F+   LNRD W+NEAV   I  +FIFWQVY D+ EG++   +YKL   P V ++DP TGQK+  W
Sbjct:   14 KGLIQQFTTIT-GASESVGKHMLEACNNNLEMAVTMFLDG---GGIAEEPSTSSASVSTVRPHTE---------EEVRAPIPQKQEILVEPEPLFGAPKRRRPAR--SIFDGFRDFQTETIRQ---EQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEW 242          
BLAST of CX047502 vs. ExPASy Swiss-Prot
Match: UBXN7_MOUSE (UBX domain-containing protein 7 OS=Mus musculus GN=Ubxn7 PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 3.803e-31
Identity = 80/247 (32.39%), Postives = 121/247 (48.99%), Query Frame = 3
Query:  144 QSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANPGPEENSVTAGQEIGDEVRAPLPVVRDTLYDDAMFYAGSGARYPHHEPSSLIAFRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSW 884
            + ++  F  I  G +       L+A +  L+ A+ +F  G   G IA    + +  ++   P            +EVRAP+P  ++ L                 EP  L   R  ++E++  G            D     LA L+RPP  LM  GSFE AK+   +Q+KWL++N+Q+ ++F+   LNRD W+NEAV   I  +FIFWQVY D+ EG++   +YKL   P V ++DP TGQK+  W
Sbjct:   14 KGLIQQFTAIT-GASESVGKHMLEACNNNLEMAVTMFLDG---GGIAEEPSTSSASVSTVRPHTE---------EEVRAPIPQKQEILV----------------EPEPLFGVRQ-EQELRNGGA----------IDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEW 220          
BLAST of CX047502 vs. ExPASy Swiss-Prot
Match: UBXN7_DICDI (UBX domain-containing protein 7 homolog OS=Dictyostelium discoideum GN=ubxd7 PE=4 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.266e-26
Identity = 72/252 (28.57%), Postives = 130/252 (51.59%), Query Frame = 3
Query:  150 MVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANPGPEENSVTAGQEIG---DEVRAPLPVVRDTLYDDAMFYAGSGARYPHHEPSSLIAFRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSWCGMV 896
            ++S+FL I     +  A   L+  +W ++ ++  F+  N+   +   + S  ++ ++P P  +S +A  E     DE R P+P   D L D   +Y  +   Y   + +   AFR+F++E    G+ + +      A   + +L+ L++PP  ++  G+F++ K  A  +  ++LVN+Q  +EF    LNRDTW+N+ + + I  NF+FWQV     EGK     Y +   P + ++DP TGQK++   G +
Sbjct:    6 ILSNFLSITGCDDSSLATTILENNNWDVERSVDFFFTMNDPSNVKPTTSS--KKTSSP-PTASSSSASSEFDYNEDEFRDPIPQKMDKLVDH--YYQPTQRSY-QKQTNVFEAFRDFEKER---GINQDK------ATEKQKSLSELFKPPLDILTFGTFDEIKKMAEQKKYFVLVNIQDVQEFDCQKLNRDTWSNKDLKELIGENFVFWQVNSANPEGKWFTQIYPVFKFPYIAIIDPRTGQKLQDMTGFI 242          
BLAST of CX047502 vs. ExPASy Swiss-Prot
Match: UBX2_SCHPO (UBX domain-containing protein 2 OS=Schizosaccharomyces pombe GN=ubx2 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.653e-26
Identity = 76/261 (29.12%), Postives = 122/261 (46.74%), Query Frame = 3
Query:  138 DKQSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANPGPEENSVTAGQEIGDEVRAPLPVVRDTLYDDAM------------FYAGSGARYPHHEPSSLIAFRNFDEEMKRPGVWESEQGAASTADSSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKLDSIPVVLVVDPITGQKMRSW 884
            D+ S+V++F  I    T E A ++L      L  AI LF+   ESG +     S  E  +   P E           E+RAP+   R+ L D               F  G   R    +   +  F     ++  P     +    S + S    LA L+RPP+ ++ N S ++A+  AS Q +W+LVNLQ++  F   +LNRD W +E+V + I  +F+F Q+ DD   G +   +Y + S P + ++DP TG++++ W
Sbjct:    4 DEASLVANFCAIT-NSTPEKAQEYLSVADGDLSTAITLFF---ESGGVTDVQSSYIEAPSQTEPVE-----------EIRAPIAPTREVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMGIFDQSPSQIPFPSSNTEDSSEESDSSSRASRLAKLFRPPYDIISNLSLDEARIEASSQKRWILVNLQTSTSFECQVLNRDLWKDESVKEVIRAHFLFLQLLDDEEPGMEFKRFYPVRSTPHIAILDPRTGERVKEW 249          
BLAST of CX047502 vs. ExPASy Swiss-Prot
Match: UBX5_YEAST (UBX domain-containing protein 5 OS=Saccharomyces cerevisiae GN=UBX5 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.074e-17
Identity = 78/314 (24.84%), Postives = 124/314 (39.49%), Query Frame = 3
Query:  144 QSMVSSFLEIAVGQTAETAVQFLQATSWKLDEAIQLFYVGNESGAIASASRSPAEEIANP-GPEENSVTAGQEIG---------------DEVRAPLPVVRDTLYDDAMF---YAGSGARY-PHHE---------PSSLIAFR-----------------------NFDEE---MKRPGVWESEQGAASTAD---------SSRDNLASLYRPPFHLMFNGSFEKAKDAASVQDKWLLVNLQSTKEFSSHMLNRDTWANEAVSQTISTNFIFWQVYDDTSEGKKVCTYYKL---DSIPVVLVVDPITGQKMRSW 884
            +  V  F+ I     A  A QF++     L+ AI LF+  N   A+ S++ +P    + P  P      A  ++                D VR P     + L + + F   Y G G R+ P H          P S+   R                       N D+E   ++ P +   E G               S    LA L+RPPF +M     + AK  A  + KW+++N+Q +  F    LNRD W++  V   I  NF+F Q   ++   +    +Y L   D +P + ++DPITG++++ W
Sbjct:    3 EGKVDEFMAITGADDAAIATQFIEMADGNLNTAISLFFE-NGGAALLSSNNTPTPSNSTPMAPTSVDSDADAQLAERLQREAYQQQQPDQDYVRPPDEARHEVLTETSGFPISYGGIGGRFEPLHRVNDMFDEGRPESIFNQRLDDTNTNTYINDNSSDSLDSEEENDDDEYEYVEEPVIELDEDGNIKEYTKLVRKPKTISKEQKLALLFRPPFSIMSKLDLDAAKQKARAKQKWIMINIQDSGIFQCQALNRDLWSSRPVKTIIKENFVFLQYQYESRNAQPYLQFYHLNNKDDLPHIAILDPITGERVKQW 315          
The following BLAST results are available for this feature:
BLAST of CX047502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
UBXN7_PONAB2.814e-3434.01UBX domain-containing protein 7 OS=Pongo abelii GN... [more]
UBXN7_HUMAN2.814e-3434.01UBX domain-containing protein 7 OS=Homo sapiens GN... [more]
UBXN7_MOUSE3.803e-3132.39UBX domain-containing protein 7 OS=Mus musculus GN... [more]
UBXN7_DICDI1.266e-2628.57UBX domain-containing protein 7 homolog OS=Dictyos... [more]
UBX2_SCHPO1.653e-2629.12UBX domain-containing protein 2 OS=Schizosaccharom... [more]
UBX5_YEAST1.074e-1724.84UBX domain-containing protein 5 OS=Saccharomyces c... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_14E08_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14E08-J15-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047502 ID=CX047502; Name=CX047502; organism=Citrus sinensis; type=EST; length=900bp
AAAATACCAAATTTATCGGTGCTAGATGAACGGGTTTCACATTTGATGTA
AGAAGTATCAAAATCAAATGATAAAATAGAAGTGGGTTTGTTTCTGTTTC
TGTAAACGAAGCAATGGACTCTGTATTATCAGCTAATGACAAGCAGAGCA
TGGTCTCTTCTTTCCTCGAGATCGCCGTTGGCCAAACTGCTGAGACTGCT
GTTCAGTTTTTGCAGGCCACAAGTTGGAAGCTTGACGAAGCCATTCAGCT
GTTTTATGTGGGTAATGAAAGTGGGGCGATTGCATCAGCTTCACGGTCTC
CTGCGGAAGAAATTGCTAATCCAGGGCCTGAAGAGAATTCTGTAACTGCT
GGACAGGAGATTGGAGATGAAGTTCGTGCTCCACTACCGGTTGTAAGGGA
TACTCTTTATGATGATGCAATGTTTTATGCAGGGTCAGGAGCAAGATACC
CGCACCATGAACCAAGTTCATTGATTGCATTCCGGAATTTTGATGAGGAA
ATGAAACGTCCTGGGGTTTGGGAATCTGAACAAGGTGCTGCATCTACTGC
AGACTCTTCACGGGATAATCTTGCTTCTTTGTACCGTCCTCCATTCCATC
TGATGTTCAATGGCTCATTTGAAAAGGCAAAAGATGCTGCTTCTGTTCAG
GACAAATGGCTCCTTGTGAACTTGCAATCTACAAAGGAGTTTAGTTCTCA
TATGCTTAATAGGGATACATGGGCAAATGAAGCTGTTTCCCAAACTATTA
GTACAAACTTTATCTTCTGGCAGGTGTATGATGATACGAGTGAGGGCAAG
AAAGTTTGCACCTATTATAAATTGGATTCTATTCCTGTAGTGCTTGTCGT
TGACCCAATCACAGGCCAAAAAATGCGTTCATGGTGTGGAATGGTTCAAC
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