CX047487

Overview
NameCX047487
Unique NameCX047487
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047487 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 5.630e-71
Identity = 139/185 (75.14%), Postives = 149/185 (80.54%), Query Frame = -2
Query:  271 GKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISPXXXXXXXXXXXXXXXXXEMKESSAAKEDVDTEYSGKDEL 825
            GKD+KDKELKESFKELTKWWKGALASENVDDVK+SNRL NTPCVVVTSKYGWS+NMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKD ED  V+QTA+L+YQTALMESGF LNDPK+FAS IY +VKSSL ISP                    ESSAA++        KDEL
Sbjct:  633 GKDSKDKELKESFKELTKWWKGALASENVDDVKISNRLANTPCVVVTSKYGWSSNMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDAEDESVKQTARLMYQTALMESGFMLNDPKEFASSIYDSVKSSLKISPDATVEEEDDTEEAEAESGTTESSAAEDAGAETLDLKDEL 817          
BLAST of CX047487 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 8.413e-67
Identity = 121/146 (82.88%), Postives = 137/146 (93.84%), Query Frame = -2
Query:  388 GKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISP 825
            GKD+KDKELKE+FKELTKWWKG LASENVDDVK+SNRL +TPCVVVTSK+GWSANMERIMQSQTLSDA+KQAYMRGKRVLEINPRHPIIKEL++R+  DPED  V++TAQL+YQTAL+ESGF L DPKDFA+RIY++VKS LNISP
Sbjct:  629 GKDSKDKELKEAFKELTKWWKGNLASENVDDVKISNRLADTPCVVVTSKFGWSANMERIMQSQTLSDANKQAYMRGKRVLEINPRHPIIKELKDRIASDPEDESVKETAQLMYQTALIESGFILTDPKDFAARIYNSVKSGLNISP 774          
BLAST of CX047487 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.471e-60
Identity = 110/146 (75.34%), Postives = 131/146 (89.73%), Query Frame = -2
Query:  388 GKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISP 825
            GKD+K K+LKESFKELT WWK AL +E +D VK+SNRL NTPCVVVTSKYGWS+NME+IMQ+QTLSDASKQAYMRGKRVLEINPRHPIIKELR++V +D +  G++QTA+L+YQTALMESGF+L DPKDFAS IY +V+ SL++SP
Sbjct:  626 GKDSKLKDLKESFKELTDWWKKALDTEGIDSVKISNRLHNTPCVVVTSKYGWSSNMEKIMQAQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSDSEGLKQTARLVYQTALMESGFNLPDPKDFASSIYRSVQKSLDLSP 771          
BLAST of CX047487 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.958e-31
Identity = 73/141 (51.77%), Postives = 95/141 (67.38%), Query Frame = -2
Query:  391 KDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNIS 813
            K +E K  F+ L K  K  L  + V+ V VSNRL ++PC +VTS+YGWSANMERIM++Q L D+S   YM  K+ LEINP H +IK LRERV  D  D  V+    L+++TAL+ SGFSL DP+  ASRIY  +K  L+I+
Sbjct:  542 KFEEDKVKFENLCKVMKDIL-EKKVEKVAVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSVIKALRERVEADKNDKTVKDLVVLLFETALLSSGFSLEDPQLHASRIYRMIKLGLDIT 681          
BLAST of CX047487 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 2.557e-31
Identity = 72/140 (51.43%), Postives = 94/140 (67.14%), Query Frame = -2
Query:  394 KDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 813
            K +E K  F+ L K  K  L S+ V+ V VSNRL ++PC +VTS+YGWSANMERIM++Q L D+S   YM GK+ LEINP H II+ LR+R   D  D  V+    L+++TAL+ SGFSL++P   ASRIY  +K  L I
Sbjct:  540 KREEDKAKFENLCKVMKSVLESK-VEKVMVSNRLVDSPCCIVTSQYGWSANMERIMKAQALRDSSAMGYMAGKKHLEINPDHAIIETLRQRAEADKNDKAVKDLVILLFETALLSSGFSLDEPGTHASRIYRMIKLGLGI 678          
BLAST of CX047487 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 5.696e-31
Identity = 68/140 (48.57%), Postives = 92/140 (65.71%), Query Frame = -2
Query:  394 KDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 813
            K  ELK  ++ L K  K  L  + ++ V VSNRL ++PC +VTS YGW+ANMERIM+SQ L D S   YM  K+ LEINP HPI++ LRE+   D  D  V+    L+++TAL+ SGF+L+DP+  A+RIY  +K  L I
Sbjct:  553 KQDELKAKYENLCKIMKDIL-DKKIEKVTVSNRLVSSPCCIVTSTYGWTANMERIMKSQALRDNSTMGYMTAKKHLEINPAHPIVETLREKAEADKNDKAVKDLVILLFETALLSSGFTLDDPQTHANRIYRMIKLGLGI 691          
BLAST of CX047487 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.657e-30
Identity = 70/140 (50.00%), Postives = 95/140 (67.86%), Query Frame = -2
Query:  394 KDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 813
            K +E K +++ L K  K  L  + ++ V VSNRL ++PC +VTS+YGWSANMERIM++Q L D+S   YM  K+ LEINP H I+K LRERV  D  D  V+    L+++TAL+ SGFSL +P+  ASRIY  +K  L+I
Sbjct:  534 KFEEDKVAYENLCKVIKDIL-EKKIEKVAVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHAIMKTLRERVEADKNDKTVKDLVVLLFETALLSSGFSLEEPQSHASRIYRMIKLGLDI 672          
BLAST of CX047487 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.822e-30
Identity = 66/140 (47.14%), Postives = 92/140 (65.71%), Query Frame = -2
Query:  394 KDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 813
            K +E K  F+ L K  K  L  + V++V +SNRL ++PC +VTS YGW+ANMERIM++Q L D S   YM  K+ LEINP HPI++ LR++   D  D  V+    L+++TAL+ SGFSL DP+  ++RIY  +K  L I
Sbjct:  552 KMEESKAKFENLCKLMKEIL-DKKVEEVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGI 690          
BLAST of CX047487 vs. ExPASy Swiss-Prot
Match: HSP90_CAEEL (Heat shock protein 90 OS=Caenorhabditis elegans GN=daf-21 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.297e-30
Identity = 70/140 (50.00%), Postives = 95/140 (67.86%), Query Frame = -2
Query:  394 KDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 813
            K +E K +++ L K  K  L  + V+ V VSNRL ++PC +VTS+YGWSANMERIM++Q L D+S   YM  K+ LEINP H I+K LR+RV  D  D  V+    L+++TAL+ SGFSL +P+  ASRIY  +K  L+I
Sbjct:  530 KFEEDKVAYENLCKVIKDIL-EKKVEKVGVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHAIMKTLRDRVEVDKNDKTVKDLVVLLFETALLASGFSLEEPQSHASRIYRMIKLGLDI 668          
BLAST of CX047487 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 6.297e-30
Identity = 68/140 (48.57%), Postives = 94/140 (67.14%), Query Frame = -2
Query:  394 KDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI 813
            K +E K  F+ L K  K  L S+ V+ V VSNRL ++PC +VTS++GWSANMERIM++Q L D +   YM GK+ LEINP HPI++ LR++   D  D  V+    L+++T+L+ SGFSL+ P+  ASRIY  +K  L I
Sbjct:  545 KREEDKAKFEGLCKLMKSILDSK-VEKVVVSNRLVDSPCCIVTSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVEALRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLGI 683          
The following BLAST results are available for this feature:
BLAST of CX047487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
ENPL_CATRO5.630e-7175.14Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]
ENPL_ARATH8.413e-6782.88Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
ENPL_HORVU4.471e-6075.34Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
HSP90_BRUPA1.958e-3151.77Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HSP83_ANOGA2.557e-3151.43Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]
H90A1_DANRE5.696e-3148.57Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HSP90_CAEBR1.657e-3050.00Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]
HS90B_PONAB4.822e-3047.14Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]
HSP90_CAEEL6.297e-3050.00Heat shock protein 90 OS=Caenorhabditis elegans GN... [more]
HSP83_DROPS6.297e-3048.57Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_14D12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14D12-H23-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047487 ID=CX047487; Name=CX047487; organism=Citrus sinensis; type=EST; length=826bp
TTTTTTTTTTTAAAACAAGGAGAAATTGAAAGCCCATTGATATAAGCGAA
TTACACAAACAATCATAATCTGACACGCTGATTCATCCATAATTGATAGT
GTCAACTGTTAAAAGACAAAATTCCCGGTGATTATGGTTACATTGAATCT
AAGATCTAAAACGTTTTTTCACCAAAGTTTTCAAAACTGGAAATGAACGC
ACTATGCAGAGCGTTTATGCTTTCCTAAGAAACTGGGATGTTGTTGCCCA
TGCTTTTATTAGGCAATCTACAACTCATCCTTGCCAGAATACTCTGTATC
CACGTCCTCTTTGGCAGCCGAAGATTCTTTCATTTCAGTGTCAGCATCAG
TCTCTTCTACATCATCTTCCTCCTCAACAGCTGCATCAGGGCTAATGTTA
AGGCTAGATTTCACCGTGCTGTAAATTCGGGAGGCAAAATCCTTGGGATC
ATTGAGCGAAAAGCCACTCTCCATGAGTGCCGTCTGGTAAATGAGTTGGG
CTGTTTGCTGGACACCCGCATCCTCAGGGTCCTTGACGACTCTCTCCCGG
AGCTCTTTGATGATTGGATGCCTTGGATTGATTTCAAGCACCCTCTTGCC
CCGCATATATGCTTGCTTGCTAGCATCTGAGAGAGTCTGAGACTGCATGA
TCCTCTCCATATTCGCACTCCAACCATACTTTGATGTCACAACTACGCAA
GGGGTGTTATCCAAGCGGTTGCTTACTTTCACATCATCCACGTTCTCGCT
GGCAAGAGCACCCTTCCACCATTTCGTGAGCTCCTTGAATGACTCCTTAA
GTTCCTTATCTTTAGTGTCTTTACCA
back to top