CX047462

Overview
NameCX047462
Unique NameCX047462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047462 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 2.234e-66
Identity = 121/232 (52.16%), Postives = 164/232 (70.69%), Query Frame = 2
Query:   89 EQKLLRSVFCLWVLASCLLLPASSNGLRSIGLKKRRLDLHSLNAARITRKERYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNMDPDA 784
            ++ LL    CLW L+  LLL ASS+G   + L K+RLD   L AA++ ++   +          + G SD D +PL ++++ QY+G IG+GSPPQNF+VIFDTGSSNLWVPS+KCYFSI+CY HSRY S+KS++Y   G++C+I YGSG+ISGFFS+              FIEATRE S+TF++ +FDGI+GLG+ EI+VG A P+W +M EQ L++++VFSFWLN DPDA
Sbjct:    3 KRHLLLVTTCLWALSCALLLHASSDGFLRVNLNKKRLDKEDLTAAKLAQQGNRL---------LKTGSSDSDPVPLVDYLNTQYYGVIGLGSPPQNFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYNSKKSSSYKADGETCKITYGSGAISGFFSKDNVLVGDLVVKNQKFIEATRETSVTFIIGKFDGILGLGYPEISVGKAPPIWQSMQEQELLADDVFSFWLNRDPDA 225          
BLAST of CX047462 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 247.284 bits (630), Expect = 7.185e-65
Identity = 127/221 (57.47%), Postives = 161/221 (72.85%), Query Frame = 2
Query:  125 VLASCLLLPASSNGLRSIGLKKRRLDLHSLNAARITRKE--RYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNMDPD 781
            VL   LL  +++ GL  I LKKR +D +S  AAR++ +E  R +G  G + +    G  + DI+ LKN+M+AQYFGEIG+G+PPQ F+VIFDTGSSNLWVPS+KCYFSI+C+FHSRYKS +S+TY + GK   I YG+GSI+GFFS+              FIEAT+E  LTF++A+FDGI+GLGF+EI+VGDAVPVW  MVEQGLVSE VFSFW N   D
Sbjct:   14 VLLQALLPASAAEGLVRIALKKRPIDENSRVAARLSGEEGARRLGLRGANSLGG--GGGEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACFFHSRYKSGQSSTYQKNGKPAAIQYGTGSIAGFFSEDSVTVGDLVVKDQEFIEATKEPGLTFMVAKFDGILGLGFQEISVGDAVPVWYKMVEQGLVSEPVFSFWFNRHSD 232          
BLAST of CX047462 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 8.221e-61
Identity = 124/227 (54.63%), Postives = 159/227 (70.04%), Query Frame = 2
Query:  119 LWVLASCLLL----PASSN--GLRSIGLKKRRLDLHSLNAARITRKERYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNMDPD 781
            L +LA+ LLL    PA+S   GL  I LKKR +D +S  A  ++  E       +SG +    + + DI+ LKN+M+AQYFGEIG+G+PPQ F+VIFDTGSSNLWVPS+KCYFSI+CY HSRYK+  S+TY + GK   I YG+GSI+G+FS+              FIEAT+E  +TFL+A+FDGI+GLGF+EI+VG AVPVW  M+EQGLVS+ VFSFWLN   D
Sbjct:    8 LALLAAVLLLQTVLPAASEAEGLVRIALKKRPIDRNSRVATGLSGGEEQ---PLLSGANPLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVD 231          
BLAST of CX047462 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 4.080e-60
Identity = 110/171 (64.33%), Postives = 130/171 (76.02%), Query Frame = 2
Query:  269 GVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNMDPD 781
            GV     DSD +++ LKN+MDAQYFGEIGIG+PPQ F+VIFDTGSSNLWVPSSKCYFS++C FHS+Y+S  S TY + GKS  I YG+GSISGFFSQ              FIEAT+E  +TFL A+FDGI+GLGF+EI+VGDAVPVW  M+ QGLV E VFSFWLN + D
Sbjct:   28 GVRGNFRDSDGELIALKNYMDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSVACLFHSKYRSTDSTTYKKNGKSAAIQYGTGSISGFFSQDSVKLGDLLVKEQDFIEATKEPGITFLAAKFDGILGLGFQEISVGDAVPVWYTMLNQGLVQEPVFSFWLNRNAD 198          
BLAST of CX047462 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.329e-60
Identity = 122/222 (54.95%), Postives = 161/222 (72.52%), Query Frame = 2
Query:  116 CLWVLASCLLLPASSN-GLRSIGLKKRRLDLHSLNAARITRKERYMGGAGVSGVHHR--LGDS-DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLN 769
            CL++L S  ++ ++SN GL  +GLKK +LD  +  AAR+  K+  +  A     + +  LG+S D DI+ LKN++DAQY+GEI IG+PPQ F+VIFDTGSSNLWV   +C FS++C+FH+RYKS +S++Y + G S  I YG+G++SGFFS               FIEATRE SLTFL+A+FDG++GLGF+EIAVG+AVPVW NMVEQGLV E VFSFWLN
Sbjct:   12 CLFLLVSFNIVSSASNDGLLRVGLKKIKLDPENRLAARVESKDAEILKAAFRKYNPKGNLGESSDTDIVALKNYLDAQYYGEIAIGTPPQKFTVIFDTGSSNLWV-LCECLFSVACHFHARYKSSRSSSYKKNGTSASIRYGTGAVSGFFSYDNVKVGDLVVKEQVFIEATREPSLTFLVAKFDGLLGLGFQEIAVGNAVPVWYNMVEQGLVKEPVFSFWLN 232          
BLAST of CX047462 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.458e-41
Identity = 100/241 (41.49%), Postives = 141/241 (58.51%), Query Frame = 2
Query:  128 LASCLLLPASSNGLRSIGLKKRRLDLHSLNAARITRKERYMGGA--------GVSGVHHRLGDSDEDILP--LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQ-----------XXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNMDPDA 784
            LA CLL   +S  +R        + LH   + R T  E  +GG+         VS     +    E  +P  LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G S +I+YGSGS+SG+ SQ                         F EAT++  +TF+ A+FDGI+G+ +  I+V + +PV+DN+++Q LV + +FSF+L+ DPDA
Sbjct:    9 LALCLLAAPASALVR--------IPLHKFTSIRRTMSE--VGGSVEDLIAKGPVSKYSQAVPAVTEGPIPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDA 239          
BLAST of CX047462 vs. ExPASy Swiss-Prot
Match: CATD_CHICK (Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.904e-41
Identity = 79/158 (50.00%), Postives = 108/158 (68.35%), Query Frame = 2
Query:  314 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNMDPDA 784
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C+   I+C  H +Y + KS+TY E G    I+YG+GS+SGF SQ              F EA ++  +TF+ A+FDGI+G+ F  I+V    P +DN+++Q L+ + +FSF+LN DP A
Sbjct:   70 LKNYMDAQYYGEIGIGTPPQKFTVVFDTGSSNLWVPSVHCHLLDIACLLHHKYDASKSSTYVENGTEFAIHYGTGSLSGFLSQDTVTLGNLKIKNQIFGEAVKQPGITFIAAKFDGILGMAFPRISVDKVTPFFDNVMQQKLIEKNIFSFYLNRDPTA 227          
BLAST of CX047462 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 5.540e-41
Identity = 80/159 (50.31%), Postives = 107/159 (67.30%), Query Frame = 2
Query:  311 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFS-ISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNMDPDA 784
            PL N++DAQY+G I IG+PPQ+F V+FDTGSSNLWVPS +C F+ I+C  H++Y ++KS+T+ + G +  I YGSGS+SG+ S               F EA  E  L F+ A+FDGI+GLG+  I+V   VPV+ NM  QGL+   VFSF+LN DP A
Sbjct:   59 PLSNYLDAQYYGAITIGTPPQSFKVVFDTGSSNLWVPSKECSFTNIACLMHNKYNAKKSSTFEKNGTAFHIQYGSGSLSGYLSTDTVGLGGVSVTKQTFAEAINEPGLVFVAAKFDGILGLGYSSISVDGVVPVFYNMFNQGLIDAPVFSFYLNRDPSA 217          
BLAST of CX047462 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.236e-41
Identity = 81/167 (48.50%), Postives = 115/167 (68.86%), Query Frame = 2
Query:  314 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQ---------XXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNMDPDA 784
            L+N+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G S +I+YGSGS+SG+ SQ                       F EAT++  +TF+ A+FDGI+G+ +  I+V + +PV+DN+++Q LV + +FSF+LN DP+A
Sbjct:   71 LRNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSALSGLAGIKVERQTFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVEKNIFSFYLNRDPNA 237          
BLAST of CX047462 vs. ExPASy Swiss-Prot
Match: CARP_NEUCR (Vacuolar protease A OS=Neurospora crassa GN=pep-4 PE=3 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 9.450e-41
Identity = 96/223 (43.05%), Postives = 131/223 (58.74%), Query Frame = 2
Query:  125 VLASCLLLPASSNGLRSIGLKK----RRLDLHSLNAARITRKERYMGGAGVSGVHHRLGDSDEDI-----LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWL 766
            +L + +LL ++  G+ ++ LKK     +L+   ++       ++Y G    S        +D  +     +P+ NFM+AQYF EI IG+PPQ F V+ DTGSSNLWVPSS+C  SI+CY H++Y+S +S+TY + G S +I YGSGS+SGF SQ              F EAT E  L F   RFDGI+GLG+  IAV    P +  MVEQ LV E VFSF+L
Sbjct:    5 LLTAAMLLGSAQAGVHTMKLKKVPLAEQLESVPIDVQVQHLGQKYTGLRTESHTQAMFKATDAQVSGNHPVPITNFMNAQYFSEITIGTPPQTFKVVLDTGSSNLWVPSSQCG-SIACYLHNKYESSESSTYKKNGTSFKIEYGSGSLSGFVSQDRMTIGDITINDQLFAEATSEPGLAFAFGRFDGILGLGYDRIAVNGITPPFYKMVEQKLVDEPVFSFYL 226          
The following BLAST results are available for this feature:
BLAST of CX047462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
ASPRX_ORYSJ2.234e-6652.16Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
ASPR1_ORYSJ7.185e-6557.47Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
ASPR_HORVU8.221e-6154.63Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
CYPR1_CYNCA4.080e-6064.33Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPR_CUCPE5.329e-6054.95Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
CATD_HUMAN1.458e-4141.49Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CATD_CHICK1.904e-4150.00Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1[more]
ASPP_AEDAE5.540e-4150.31Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATD_CANFA7.236e-4148.50Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1[more]
CARP_NEUCR9.450e-4143.05Vacuolar protease A OS=Neurospora crassa GN=pep-4 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_14C11_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14C11-F21-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047462 ID=CX047462; Name=CX047462; organism=Citrus sinensis; type=EST; length=785bp
CTCTGTCACTCTACACTTCCTGAAGTACATTATCTTCACTTTACCTTGCT
TCAAACTCAGCTTCAGCAGAAAACCAAAGAACATCATGGAGCAGAAACTT
CTTCGGTCAGTTTTCTGTTTATGGGTGCTAGCGTCGTGCTTGCTTCTTCC
TGCTTCCTCTAATGGCTTACGGAGCATTGGCTTGAAGAAGCGGCGTCTAG
ATCTTCATAGTCTAAATGCTGCAAGAATAACAAGAAAAGAGCGATATATG
GGGGGAGCAGGTGTTAGTGGCGTGCACCATCGTTTGGGTGATTCAGATGA
AGATATTTTGCCTTTGAAGAACTTTATGGATGCTCAATACTTTGGAGAGA
TTGGTATTGGCTCTCCCCCACAAAATTTCAGTGTCATATTTGATACCGGC
AGTTCCAATCTCTGGGTTCCATCTTCAAAGTGCTATTTCTCTATTTCCTG
CTATTTCCATTCGAGGTACAAGTCCAGAAAATCCAATACATATACCGAAA
TTGGAAAATCCTGTGAAATAAACTATGGATCTGGATCAATTTCTGGCTTC
TTCAGTCAAGACAATGTTGAAGTTGGGGATGTTGTTGTCAAGGATCAGGT
TTTCATTGAGGCTACACGAGAAGGGAGTCTCACTTTTCTATTGGCAAGGT
TTGATGGAATAATAGGGCTTGGGTTCCGGGAAATTGCAGTTGGGGATGCT
GTGCCTGTGTGGGACAATATGGTTGAGCAGGGCCTTGTAAGCGAGGAGGT
CTTCTCATTCTGGCTCAACATGGATCCAGACGCTG
back to top