CX047455

Overview
NameCX047455
Unique NameCX047455
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX047455 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 42/76 (55.26%), Postives = 45/76 (59.21%), Query Frame = 3 
Query:    9 LKKYWERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSCRS 236
            ++K  ERGDRIELLVDKTATMQD +FHFRKQSKRLRRALWMKN                            PSCRS
Sbjct:  146 IEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKNAKLLVLLTCLIVFLLYIIIASFCGGITLPSCRS 221
The following BLAST results are available for this feature:
BLAST of CX047455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
VA714_ARATH1.692e-1455.26Vesicle-associated membrane protein 714 OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_14C07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14C07-F13-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047455 ID=CX047455; Name=CX047455; organism=Citrus sinensis; type=EST; length=716bp
GGAGAATATTGAAAAAATATTGGGAGAGAGGTGATAGGATTGAGCTTCTT
GTTGACAAAACTGCAACAATGCAAGACGGCGCATTTCACTTTAGGAAACA
GTCTAAGCGCCTTCGTAGAGCGCTTTGGATGAAAAATGCTAAGCTATTGG
CCCTCTTGACAGGCTTAATTGTTCTGTTGCTGTACATAATAATTGCTGCT
GCTTGTGGAGGCATCACTTTACCTTCATGCAGATCTTGAGTCGTGGTCAA
CTGGTGTTAAATTACTGCTCGGGTGTGCATTGATGTTGTTTGTTGTCAAT
TATGTGAATTAATCTTGGACGGGTTTCCTTGGTTTTGTGGGTCAACTATT
TAAGGAGTATGTGGAAATATAGTATCTATACAGCTGCAAGGTGCCAGAAA
TAATCCTGCAGATGCTCTCATTATAACATTCAGTATAAGGGACATATCTC
GGAAGTCTGACGAGATGCCATCTCATTGTGGTGAGCCATCGTTGTATTCT
GTAAATGCTTGGAATTTTTAGTATCTTATTTTTCATTGTCTGATTTTGAA
ATTCTGGTCTTGTAATCTTCATATGAGTCATCTTTTTGTAGAAAGTATAT
TTGAACGCAACCAAAACAGTGCAGCATTAGTAGTGACGCTTTTTCTTCCC
TTACAACTACTTGTATCAATGTGGTATCAGATACTAGATGGTTTTGGTTC
AAAAAAAAAAAAACCT
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