CX047446

Overview
NameCX047446
Unique NameCX047446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047446 vs. ExPASy Swiss-Prot
Match: EXOC5_ORYSJ (Exocyst complex component 5 OS=Oryza sativa subsp. japonica GN=SEC10 PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.237e-80
Identity = 144/165 (87.27%), Postives = 159/165 (96.36%), Query Frame = -3
Query:  443 YKGLQQCIETVMAEVERLLSAEQKPSDYKSPDDGIAPDHRPTNACTRVVAYLSRVLEAAFTALEGLNKQAFLTELGNRLHKGLLNHWQKFTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKDAQRFIQLREDYK 937
            +KGL QCI+TVM+EVERLLS+EQK +DY++PDDG APDHRPTNAC R+VAYLSRVLE AF+ALEGLNKQ+FLTELGNRLHKGLLNHWQKFTF+PSGGLRLKRDITEYGEFVRSFNAPS+DEKFELLGIMANVFIVAPESL++LFEGTPSIRKDA RFIQLR+DYK
Sbjct:  628 HKGLLQCIDTVMSEVERLLSSEQKATDYRTPDDGAAPDHRPTNACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRLHKGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSIDEKFELLGIMANVFIVAPESLASLFEGTPSIRKDALRFIQLRDDYK 792          
BLAST of CX047446 vs. ExPASy Swiss-Prot
Match: EXOC5_ARATH (Exocyst complex component 5 OS=Arabidopsis thaliana GN=SEC10 PE=2 SV=2)

HSP 1 Score: 287.345 bits (734), Expect = 8.298e-77
Identity = 143/165 (86.67%), Postives = 153/165 (92.73%), Query Frame = -3
Query:  443 YKGLQQCIETVMAEVERLLSAEQKPSDYKSPDDGIAPDHRPTNACTRVVAYLSRVLEAAFTALEGLNKQAFLTELGNRLHKGLLNHWQKFTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKDAQRFIQLREDYK 937
            YKGLQQCIETVMAEV+RLLS+EQK +DY+S DDGIA DHRPTNAC RVVAYLSRVLE+AFTALEGLNKQAFLTELGNRL K LL HWQKFTFNPSGGLRLKRD+ EY  FV+SF APSVDEKFELLGI+ANVFIVAP+SL TLFEG+PSIRKDAQRFIQLREDYK
Sbjct:  645 YKGLQQCIETVMAEVDRLLSSEQKSTDYRSTDDGIASDHRPTNACIRVVAYLSRVLESAFTALEGLNKQAFLTELGNRLEKLLLTHWQKFTFNPSGGLRLKRDLNEYVGFVKSFGAPSVDEKFELLGIIANVFIVAPDSLPTLFEGSPSIRKDAQRFIQLREDYK 809          
BLAST of CX047446 vs. ExPASy Swiss-Prot
Match: EXOC5_HUMAN (Exocyst complex component 5 OS=Homo sapiens GN=EXOC5 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.628e-19
Identity = 51/166 (30.72%), Postives = 92/166 (55.42%), Query Frame = -3
Query:  443 GLQQCIETVMAEVERLLSAEQKPSDYKSPDDGIAPDHRPTNACTRVVAYLSRVLEAAFTALEGLNKQAFLTELGNRLHKGLLNHWQKFTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKD---AQRFIQLREDYK 931
            G+ + +  ++ +++ +L+AEQK +D+K P+D      + TNAC +V AY+ + +E    +++G N    L ELG R H+ +  H Q+++++  GG+    D+ EY +  + F  P V   F+ L  + N+ +VAP++L  +  G      D      F+QLR DY+
Sbjct:  535 GIDRTLNCMIGQMKHILAAEQKKTDFK-PEDENNVLIQYTNACVKVCAYVRKQVEKIKNSMDGKNVDTVLMELGVRFHRLIYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPMVLHLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYR 699          
BLAST of CX047446 vs. ExPASy Swiss-Prot
Match: EXOC5_RAT (Exocyst complex component 5 OS=Rattus norvegicus GN=Exoc5 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.031e-18
Identity = 51/166 (30.72%), Postives = 91/166 (54.82%), Query Frame = -3
Query:  443 GLQQCIETVMAEVERLLSAEQKPSDYKSPDDGIAPDHRPTNACTRVVAYLSRVLEAAFTALEGLNKQAFLTELGNRLHKGLLNHWQKFTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKD---AQRFIQLREDYK 931
            G+ + +  ++ +++ +L+AEQK +D+K P+D      + TNAC +V AY+ + +E    +++G N    L ELG R H+    H Q+++++  GG+    D+ EY +  + F  P V   F+ L  + N+ +VAP++L  +  G      D      F+QLR DY+
Sbjct:  535 GIDRTLNCMIGQMKHILAAEQKKTDFK-PEDENNVLIQYTNACVKVCAYVRKQVEKIKNSMDGKNVDTVLMELGVRFHRLTYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPMVLHLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYR 699          
BLAST of CX047446 vs. ExPASy Swiss-Prot
Match: EXOC5_MOUSE (Exocyst complex component 5 OS=Mus musculus GN=Exoc5 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.727e-18
Identity = 49/166 (29.52%), Postives = 90/166 (54.22%), Query Frame = -3
Query:  443 GLQQCIETVMAEVERLLSAEQKPSDYKSPDDGIAPDHRPTNACTRVVAYLSRVLEAAFTALEGLNKQAFLTELGNRLHKGLLNHWQKFTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKD---AQRFIQLREDYK 931
            G+ + +  ++ +++ +L+AEQK +D+K P+D      + TNAC +V  Y+ + +E    +++G N    L ELG R H+ +  H Q+++++  G +    D+ EY +  + F  P V   F+ L  + N+ +VAP++L  +  G      D      F+QLR DY+
Sbjct:  535 GIDRTLNCMIGQMKHILAAEQKKTDFK-PEDENNVLIQYTNACVKVCVYVRKQVEKIKNSMDGKNVDTVLMELGVRFHRLIYEHLQQYSYSCMGDMLAICDVAEYRKCAKDFKIPMVLHLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYR 699          
BLAST of CX047446 vs. ExPASy Swiss-Prot
Match: EXOC5_DROME (Exocyst complex component 5 OS=Drosophila melanogaster GN=sec10 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.539e-17
Identity = 55/167 (32.93%), Postives = 88/167 (52.69%), Query Frame = -3
Query:  443 KGLQQCIETVMAEVERLLSAEQKPSDYKSPDDGIAPDHRPTNACTRVVAYLSRVLEAAFTALEGLNKQAFLTELGNRLHKGLLNHWQKFTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKD---AQRFIQLREDYK 934
            +GL + I  V+  V+  L  EQK +DYK   D    D   + AC +VV  L  V+      ++G N Q  LTE G RLH+ + +H Q   FN +G +    D+ EY + +R  ++P V + F++L  + N+ +V P++L  +  G      D    ++FIQLR D++
Sbjct:  534 QGLDRSISAVIGWVKVYLQYEQKKTDYKPETD---VDTISSAACLQVVQNLQPVIVQIKKCVDGENLQNVLTEFGTRLHRVIYDHLQTMQFNTAGAMCAICDVNEYRKCIRELDSPLVTQLFDILHALCNLLLVKPQNLQEVCTGDTLNYLDKSVVRQFIQLRTDFR 697          
BLAST of CX047446 vs. ExPASy Swiss-Prot
Match: EXOC5_DICDI (Exocyst complex component 5 OS=Dictyostelium discoideum GN=exoc5 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.905e-13
Identity = 50/167 (29.94%), Postives = 86/167 (51.50%), Query Frame = -3
Query:  443 GLQQCIETVMAEVERLLSAEQKPSDYKSPDDGIAPDHRPTNACTRVVAYLSRVLEAAFTALEGLNKQAFLTELGNRLHKGLLNHWQKFTFNPS-GGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEG---TPSIRKDAQRFIQLREDYK 931
            GL+  + T++  +E+ L  + + +DY   D     D+  T+ C  V+  +    + A   L+G N   ++ ELG +     +NH++KF      G L+L RD+TEY    + F +  VD+ FELL  ++ + +V PE+   + EG   T   ++D   FI+ R D+K
Sbjct:  810 GLENSLTTMIQLIEKTLLPQGR-NDYLIDDY----DNSVTDTCASVIKLIQSFYDMAKINLQGKNFHIYVEELGLKSQFVFINHFKKFKIGQGIGTLKLMRDLTEYRNLSKQFKSQKVDDAFELLFEISKLHLVNPENFKLVIEGGALTRMSKQDLIIFIKQRSDFK 971          
BLAST of CX047446 vs. ExPASy Swiss-Prot
Match: SEC10_YEAST (Exocyst complex component SEC10 OS=Saccharomyces cerevisiae GN=SEC10 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.058e-11
Identity = 50/164 (30.49%), Postives = 80/164 (48.78%), Query Frame = -3
Query:  446 LQQCIETVMAEVERLLSAEQKPSDYKSPDDGIAPDHRPTNACTRVVAYLSRVLEAAFTALEGLNKQAFLTELGNRLHKGLLNHWQKFTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLF-EG-TPSIRKD-AQRFIQLREDY 928
            LQ+ I  +  +   +L  ++K        + +  D  P      +V  L+ + E +   L+G N Q FLT +G  L+  LL+H+  F  N  GG+ + +DI  Y   +  +   S+ +KF  L  +AN+F V PE L +L  EG    I +D  Q +I  RED+
Sbjct:  697 LQETITVISTKFSAILCKQKKKDFVPKSQELLDQDTLPA---IEIVNILNLIFEQSSKFLKGKNLQTFLTLIGEELYGLLLSHYSHFQVNSIGGVVVTKDIIGYQTAIEDWGVASLIDKFATLRELANLFTVQPELLESLTKEGHLADIGRDIIQSYISNREDF 857          
The following BLAST results are available for this feature:
BLAST of CX047446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
EXOC5_ORYSJ1.237e-8087.27Exocyst complex component 5 OS=Oryza sativa subsp.... [more]
EXOC5_ARATH8.298e-7786.67Exocyst complex component 5 OS=Arabidopsis thalian... [more]
EXOC5_HUMAN4.628e-1930.72Exocyst complex component 5 OS=Homo sapiens GN=EXO... [more]
EXOC5_RAT1.031e-1830.72Exocyst complex component 5 OS=Rattus norvegicus G... [more]
EXOC5_MOUSE8.727e-1829.52Exocyst complex component 5 OS=Mus musculus GN=Exo... [more]
EXOC5_DROME2.539e-1732.93Exocyst complex component 5 OS=Drosophila melanoga... [more]
EXOC5_DICDI2.905e-1329.94Exocyst complex component 5 OS=Dictyostelium disco... [more]
SEC10_YEAST6.058e-1130.49Exocyst complex component SEC10 OS=Saccharomyces c... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_14C02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14C02-F3-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047446 ID=CX047446; Name=CX047446; organism=Citrus sinensis; type=EST; length=939bp
TTGAAACCAACCTTAAATGTCTTTTATTTATTCCTAAAGAGTATCATTTA
CAAAGGTGCACTTAGAAACATAGAATCTTTCCAACTTGGAATGGTCAAAG
TAAAAACTGCAAACCTAACATATAACTTAAATAGAAATGCTGCCTTAAAA
ATACAACCATCGTGTTTTCCCATTCATGTTTCCACAATATATACTCAAAA
ATGGTGGAATTGAGTAAAGAATATTATAAGAGAAAAACTCCAATATACCT
GATTCTCAGGAGGAGATGATTCAGTTGTGCAACCAAAACTATCCACCATT
AAGTATCGGCCTTCTCCCGCTATTAACTTCTTTAGGTAAGATCTTCAAGA
GAATTGGAAGGTCACCTTCATATCAGCATACCCCATCAGTGTCAAGTAGA
GCTTGCCCATAATGAGCTAAGCCTGGATGCAAGCTTTGCACTCTTGTAGT
CCTCTCTAAGCTGAATAAACCTTTGCGCATCTTTCCGAATACTGGGGGTA
CCCTCAAACAAAGTAGATAGACTTTCAGGAGCAACAATAAAGACATTAGC
CATGATGCCCAACAATTCAAATTTTTCATCAACAGAAGGAGCGTTAAAGC
TGCGCACAAATTCTCCATACTCGGTTATGTCACGCTTCAGGCGTAATCCC
CCACTGGGATTAAACGTGAATTTCTGCCAATGATTAAGCAGGCCTTTATG
TAAGCGGTTTCCCAATTCAGTCAGGAATGCTTGTTTATTGAGACCTTCTA
GCGCAGTAAATGCAGCCTCAAGCACGCGGGAAAGGTAAGCCACAACTCTC
GTGCAGGCATTAGTTGGACGATGATCAGGAGCAATTCCATCATCGGGTGA
TTTATAATCAGATGGCTTTTGCTCAGCTGACAGCAACCGCTCCACCTCTG
CCATCACAGTTTCAATGCATTGTTGAAGCCCTTTATAAG
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