CX047445

Overview
NameCX047445
Unique NameCX047445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX047445 vs. ExPASy Swiss-Prot
Match: EXOC5_ARATH (Exocyst complex component 5 OS=Arabidopsis thaliana GN=SEC10 PE=2 SV=2)

HSP 1 Score: 376.326 bits (965), Expect = 1.196e-103
Identity = 200/287 (69.69%), Postives = 221/287 (77.00%), Query Frame = 1 
Query:    1 GLLLYLRMLAVAYEKTQELARDLRTVGCGDLDIEGVTECLFTSHKEEYPEHEQASLRQLYQAKMXXXXXXXXXXXXXXGTIGRSKGASVASSPQQISVTVVTEFVRWNEEALSRCTLFSSQPAALAANVRAVFTCLLDQVSQYITEGLERARDSLTEAAALRERFVLGTXXXXXXXXXXXXXXXXXXXXXXXXFRSFMVAVQRCGSSVAIVQQYFANSISRLLLPVDGAHXXXXXXXXXXXXXXXXXXYKGLQQCIETVMAEVERLLSAEQKPSDYKSPDDGIAPDH 861
            GLLLYLRMLAVAYE+TQELA+DLR VGCGDLD+E +TE LF+SHK+EYPEHE+ASL+QLYQAKM              GTIGRSKGAS++SS QQISVTVVT+FVRWNEEA++RCTLFSSQPA LAANV+A+FTCLLDQVS YITEGLERARDSL+EAAALRERFVLG                         F+SFMVAVQRCGSSVAIVQQYFANSISRLLLPVDGAH                  YKGLQQCIETVMAEV+RLLS+EQK +DY+S DDGIA DH
Sbjct:  401 GLLLYLRMLAVAYERTQELAKDLRAVGCGDLDVEDLTESLFSSHKDEYPEHERASLKQLYQAKMEELRAESQQVSESSGTIGRSKGASISSSLQQISVTVVTDFVRWNEEAITRCTLFSSQPATLAANVKAIFTCLLDQVSVYITEGLERARDSLSEAAALRERFVLG----RRVAAAAASAAEAAAAAGESSFKSFMVAVQRCGSSVAIVQQYFANSISRLLLPVDGAHAASCEEMSTALSKAEAAAYKGLQQCIETVMAEVDRLLSSEQKSTDYRSTDDGIASDH 683
[Close]
BLAST of CX047445 vs. ExPASy Swiss-Prot
Match: EXOC5_ORYSJ (Exocyst complex component 5 OS=Oryza sativa subsp. japonica GN=SEC10 PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.161e-90
Identity = 173/288 (60.07%), Postives = 208/288 (72.22%), Query Frame = 1 
Query:    1 GLLLYLRMLAVAYEKTQELARDLRTVGCGDLDIEGVTECLFTSHKEEYPEHEQASLRQLYQAKMXXXXXXXXXXXXXXGTIGRSKGASVASS-PQQISVTVVTEFVRWNEEALSRCTLFSSQPAALAANVRAVFTCLLDQVSQYITEGLERARDSLTEAAALRERFVLGTXXXXXXXXXXXXXXXXXXXXXXXXFRSFMVAVQRCGSSVAIVQQYFANSISRLLLPVDGAHXXXXXXXXXXXXXXXXXXYKGLQQCIETVMAEVERLLSAEQKPSDYKSPDDGIAPDH 861
            GLL YLR+LAVAY+KT+ELA++L+++ CGDLDIEG+TE +F SHK+EY E EQASLRQ YQ+KM              GTIGRS GA+V +S  QQISVTVVTEFVRWNEEA+SRCTL  SQPA +AANVR++F CLLDQVSQY+TEGL+ AR+SL  AA  R+R+V+GT                        FRSFM+AVQRC SSVAI+QQYF+N+ISRLLLPVDGAH                  +KGL QCI+TVM+EVERLLS+EQK +DY++PDDG APDH
Sbjct:  379 GLLHYLRVLAVAYDKTKELAKELQSISCGDLDIEGLTESIFVSHKDEYTEFEQASLRQQYQSKMAELRAEAKQQSESTGTIGRSNGAAVTTSLQQQISVTVVTEFVRWNEEAISRCTLLFSQPATVAANVRSIFACLLDQVSQYLTEGLDHARESLNHAATQRDRYVIGTSVSRRVATAAANAAEAAAAAGESSFRSFMIAVQRCASSVAILQQYFSNTISRLLLPVDGAHPSACEDMGSAVSVVEAAAHKGLLQCIDTVMSEVERLLSSEQKATDYRTPDDGAAPDH 666
The following BLAST results are available for this feature:
BLAST of CX047445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
EXOC5_ARATH1.196e-10369.69Exocyst complex component 5 OS=Arabidopsis thalian... [more]
EXOC5_ORYSJ1.161e-9060.07Exocyst complex component 5 OS=Oryza sativa subsp.... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_14C02_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14C02-F3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047445 ID=CX047445; Name=CX047445; organism=Citrus sinensis; type=EST; length=863bp
GGACTCCTATTATATCTTAGAATGCTTGCCGTTGCTTATGAGAAGACACA
GGAACTTGCTAGAGACCTACGAACCGTGGGATGTGGTGATTTGGATATTG
AGGGTGTCACAGAATGTCTTTTTACTTCTCACAAGGAGGAATATCCTGAA
CATGAACAGGCTTCTCTTAGACAACTATATCAAGCTAAGATGGAAGAATT
GCGTTCTGAAAGCCAGCAACTTTCTGAGTCATCAGGGACAATTGGGCGCT
CTAAAGGAGCTTCTGTAGCTTCTTCTCCCCAGCAGATATCTGTTACAGTT
GTGACAGAGTTTGTGCGTTGGAATGAAGAAGCGTTATCAAGATGCACTTT
ATTTTCATCTCAACCTGCTGCCCTTGCTGCCAATGTGAGAGCAGTGTTTA
CTTGCCTGCTAGACCAAGTCAGTCAATATATAACAGAGGGGCTTGAAAGG
GCTAGGGACAGCCTCACTGAAGCTGCAGCACTGAGGGAAAGGTTTGTGCT
GGGCACAAGTGTTAGTAGAAGGGTGGCTGCTGCGGCTGCATCTGCTGCAG
AAGCAGCTGCTGCTGCTGGGGAAAGCAGTTTCAGATCTTTCATGGTTGCA
GTACAACGTTGCGGTAGTAGTGTCGCTATAGTTCAGCAATACTTTGCAAA
TTCTATATCTCGGCTATTACTGCCTGTGGATGGTGCACATGCTGCTTCAT
GTGAAGAAATGGCTACTGCAATGTCCAGCGCAGAGGCTGCCGCTTATAAA
GGGCTTCAACAATGCATTGAAACTGTGATGGCAGAGGTGGAGCGGTTGCT
GTCAGCTGAGCAAAAGCCATCTGATTATAAATCACCCGATGATGGAATTG
CTCCTGATCATCG
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