CX047432

Overview
NameCX047432
Unique NameCX047432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.184e-58
Identity = 112/162 (69.14%), Postives = 128/162 (79.01%), Query Frame = -2
Query:  269 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 754
            MSLIP+FFG RR++VFDPFSLDVWDPF+DFP P+  SSA   +F  E SA V+ RVDWKETPEAH FKAD+PGL             VLQISG+R +E+EDKNDTWHR ERSSG F RRFRLPEN K++Q+KASMENGVLTVTVPK EE +K +VKAIEISG
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPK-EEVKKPDVKAIEISG 161          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.521e-57
Identity = 112/162 (69.14%), Postives = 126/162 (77.78%), Query Frame = -2
Query:  269 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 754
            MSLIPSFFG RRS+VFDPFSLDVWDPF+DFP  +   SA+S+ FP E SA V+ RVDWKETPEAH FKADLPG+             VLQISG+R +E+EDKND WHR ERSSG F RRFRLPEN KMDQ+KA+MENGVLTVTVPK EE +K  VK I+ISG
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNN---SALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPK-EEVKKPEVKTIDISG 158          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.084e-56
Identity = 112/162 (69.14%), Postives = 124/162 (76.54%), Query Frame = -2
Query:  269 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 754
            MSLIPSFFG RRSSVFDPFSLDVWDPF+DFP PS  S+        E SA V+ RVDWKETPEAH FKAD+PGL             VLQISG+R +E+EDKNDTWHR ERSSG   RRFRLPEN K+DQ+KASMENGVLTVTVPK EE +K +VKAI+ISG
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLSA--------ENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPK-EEIKKPDVKAIDISG 153          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.932e-55
Identity = 111/162 (68.52%), Postives = 124/162 (76.54%), Query Frame = -2
Query:  269 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 754
            MSLIPSFF  RRS+VFDPFSLDVWDP +DFP  +   S+ S+ FP E  A V+ RVDWKETPEAH FKADLPGL             VLQISG+R +E+EDKND WHR ERSSG F RRFRLPEN KMD++KASMENGVLTVTVPK EE +KA VK+IEISG
Sbjct:    1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFSN---SSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPK-EEIKKAEVKSIEISG 158          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.790e-54
Identity = 108/162 (66.67%), Postives = 125/162 (77.16%), Query Frame = -2
Query:  269 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 754
            MSLIP FFG RRS+VFDPFSLD+WDPF+DF +P+   SA       E SA V+ RVDWKETPEAH FKAD+PGL             VLQISG+R +E+EDKNDTWHR ERSSG F+RRFRLPEN K++++KASMENGVLTVTVPK EE +K +VKAIEISG
Sbjct:    1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDFHVPTSSVSA-------ENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPK-EEVKKPDVKAIEISG 154          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.790e-54
Identity = 109/162 (67.28%), Postives = 123/162 (75.93%), Query Frame = -2
Query:  269 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 754
            MSLIPS FG RRS+VFDPFSLDVWDPF+DF  P+  S+        E SA VN RVDWKETPEAH F+AD+PGL             VLQISG+R +E+EDKNDTWHR ERSSG F RRFRLPEN K++Q+KASMENGVLTVTVPK EE +K +VKAIEISG
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLSA--------ENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPK-EEVKKPDVKAIEISG 153          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.060e-53
Identity = 109/165 (66.06%), Postives = 126/165 (76.36%), Query Frame = -2
Query:  269 MSLIPSFFGNRR--SSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEA-RKANVKAIEISG 754
            MSLIPSFFGN R  +S+FDPFSLDVWDPF++   PS  S         ETSA+ NARVDWKET EAH FKADLPG+             VL+ISG+R +E+E+K DTWHR ERSSG FSR+F+LPENVKMDQ+KASMENGVLTVTVPKVEEA +KA VK+I+ISG
Sbjct:    1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG--------ETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.871e-53
Identity = 107/163 (65.64%), Postives = 125/163 (76.69%), Query Frame = -2
Query:  269 MSLIPSFFGN-RRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 754
            MS+IPSFF N RRS++FDPFSLDVWDPF++           SS    E SA+VNARVDW+ETPEAH FKADLPGL             VL+ISG+R +E+EDKNDTWHR ERSSG F+RRFRLPENVKMDQ+KA+MENGVLTVTVPK  E +KA+VK+I+ISG
Sbjct:    1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKEL---------TSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKA-ETKKADVKSIQISG 153          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.531e-52
Identity = 107/162 (66.05%), Postives = 125/162 (77.16%), Query Frame = -2
Query:  269 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 754
            MS+IPSFFG RRS+VFDPFSLDVWDPF+DFPL +  SSA  S+F  ET+A VN  +DWKETP+AH FKADLPGL             VLQISG+R  E+E+KND WHR ERSSG F RRFRLPEN K+D++KA+M NGV+TVTVPKV E +K  VKAI+ISG
Sbjct:    1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVT--SSA--SEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKV-EIKKPEVKAIDISG 157          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.924e-51
Identity = 103/162 (63.58%), Postives = 120/162 (74.07%), Query Frame = -2
Query:  269 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 754
            MSLIPS FG  RS+VFDPFSLD+WDPF+DF +P+   SA       E SA VN RVDWKET EAH  KAD+PGL             VLQISG+R +E+EDKNDTWHR +RSSG F RRFRLPEN K++Q+KA MENGVLTVT+PK EE +K++VK IEISG
Sbjct:    1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDFHVPTSSVSA-------ENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVLTVTIPK-EEVKKSDVKPIEISG 154          
The following BLAST results are available for this feature:
BLAST of CX047432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HSP16_SOYBN3.184e-5869.1418.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_MEDSA3.521e-5769.1418.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP11_SOYBN5.084e-5669.1417.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_PEA1.932e-5568.5218.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP14_SOYBN2.790e-5466.6717.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP13_SOYBN2.790e-5467.2817.5 kDa class I heat shock protein OS=Glycine max... [more]
HS178_ARATH1.060e-5366.0617.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HS17B_ARATH6.871e-5365.6417.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HSP11_DAUCA1.531e-5266.0517.8 kDa class I heat shock protein OS=Daucus caro... [more]
HSP15_SOYBN4.924e-5163.5817.6 kDa class I heat shock protein OS=Glycine max... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_14B07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14B07-D13-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047432 ID=CX047432; Name=CX047432; organism=Citrus sinensis; type=EST; length=824bp
TGCGATATGAATTTATAACTTTAGCTTTCACTCTATTAACTTCAACTCTT
TTTATTTATTTATTTTTTAAATTCTAAAGAGCACGAATACATTGTAAACA
AGATCAAATGACGCGCAGGGTTACAAAATTACATATCCCATTACAAGACA
CACAAAAATGGTAGGCGTCACATAAGACAACACTCAACTAAAAGTAATGA
ACCACAGACTCACTCGGGATTCAACACAAATTTTAAATCATCTTCGTTTA
TTAAATATCAATTTATCAGCCAGAAATTTCAATAGCCTTGACATTGGCTT
TCCTGGCCTCCTCCACCTTAGGGACTGTAACAGTGAGCACACCATTCTCC
ATGGAAGCCTTAATCTGATCCATCTTCACATTCTCGGGCAGCCTGAACCT
CCTGGAGAACATGCCGCTGCTGCGCTCCCAGCGATGCCACGTGTCGTTCT
TGTCTTCCCTCTCGATCCCCCTCTGCCCGCTTATCTGAAGCACCCTGTCG
TCCTCGACCTCGACCTTCACTTCCTCTTTCCTCAGCCCCGGAAGATCGGC
CTTGAACGCGTGGGCTTCCGGGGTTTCCTTCCAGTCCACGCGGGCGTTAA
CGACAGCAGAGGTTTCTGGAGGGAACTGAGACGACACCGCAGACGAATAG
CCAGACGGCAAAGGGAAGTCCCTGAATGGATCCCAAACGTCGAGCGAGAA
TGGATCGAACACACTGCTGCGTCGGTTGCCGAAGAAGCTTGGAATTAGCG
ACATTTTCTAGTTTTCTTTTCGGTTAAGAACTAATGGAAAAGTGGCTGTT
GCAGAATGTAGGATATGTAAACCT
back to top