CX047428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047428 vs. ExPASy Swiss-Prot
Match: TOM20_SOLTU (Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum GN=TOM20 PE=1 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 6.792e-65 Identity = 123/196 (62.76%), Postives = 150/196 (76.53%), Query Frame = -3 Query: 266 QSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTL--XXXXXXXXXXXXXXXXSDLKYDIFGWVILAVGIVAWVGMANSRIPPPP 847 QS+FDRLL EH RK+AE YA++PLDADNLTRWG ALLELSQF+ V++SK++I++A SK EEAL ++P KH LW LGNAHTS FLT D+ EAK F+KA++CFQ+A D +P+N+LY+KSLEV+ KAPELHME+H+HG QQT+ SDLKYDIFGWVILAVGIVAWVG A S +PPPP Sbjct: 4 QSEFDRLLFFEHARKSAETTYAQNPLDADNLTRWGGALLELSQFQPVAESKQMISDATSKLEEALTVNPEKHDALWCLGNAHTSHVFLTPDMDEAKVYFEKATQCFQQAFDADPSNDLYRKSLEVTAKAPELHMEIHRHGPMQQTMAAEPSTSTSTKSSKKTKSSDLKYDIFGWVILAVGIVAWVGFAKSNMPPPP 199
BLAST of CX047428 vs. ExPASy Swiss-Prot
Match: TO202_ARATH (Mitochondrial import receptor subunit TOM20-2 OS=Arabidopsis thaliana GN=TOM20-2 PE=1 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 1.569e-53 Identity = 106/210 (50.48%), Postives = 137/210 (65.24%), Query Frame = -3 Query: 260 MEFSQSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTL----------XXXXXXXXXXXXXXXXSDLKYDIFGWVILAVGIVAWVGMANSRIPPPPAR 859 MEFS +DF+RL++ EH RK +EA Y DPLD++NL +WG ALLELSQF+ + ++K ++N+AISK EEAL I+P KH LW + NA+T+ F D EAK FDKA+E FQRA +E+P N+ Y+KSL+ S KAPELHM+ G+ QQ L ++ YD+ GW+ILA GIVAWVGMA S PPPPAR Sbjct: 1 MEFSTADFERLIMFEHARKNSEAQYKNDPLDSENLLKWGGALLELSQFQPIPEAKLMLNDAISKLEEALTINPGKHQALWCIANAYTAHAFYVHDPEEAKEHFDKATEYFQRAENEDPGNDTYRKSLDSSLKAPELHMQFMNQGMGQQILGGGGGGGGGGMASSNVSQSSKKKKRNTEFTYDVCGWIILACGIVAWVGMAKSLGPPPPAR 210
BLAST of CX047428 vs. ExPASy Swiss-Prot
Match: TO203_ARATH (Mitochondrial import receptor subunit TOM20-3 OS=Arabidopsis thaliana GN=TOM20-3 PE=1 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.960e-52 Identity = 103/200 (51.50%), Postives = 136/200 (68.00%), Query Frame = -3 Query: 260 SQSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTL---XXXXXXXXXXXXXXXXSDLKYDIFGWVILAVGIVAWVGMANSRIPPPPAR 850 ++++FDR+LL E R+ AE Y +PLDADNLTRWG LLELSQF S+SD+K++I EAI+KFEEAL+IDP K +W +GNA+TS FLT D +EAK +FD A++ FQ+AVDE+P N Y KSLE++ KAP+LH E +K G+ Q + SD KYD GWVILA+G+VAW+ A + +P P R Sbjct: 3 TETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEAYKQGLGSQPMGRVEAPAPPSSKAVKNKKSSDAKYDAMGWVILAIGVVAWISFAKANVPVSPPR 202
BLAST of CX047428 vs. ExPASy Swiss-Prot
Match: TOM20_ORYSI (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. indica GN=TOM20 PE=2 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 3.744e-47 Identity = 96/197 (48.73%), Postives = 127/197 (64.47%), Query Frame = -3 Query: 260 SQSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTLXXXXXXXXXXXXXXXXSDLKYDIFGWVILAVGIVAWVGMANSRIPPPPAR 850 + SD +R+ + + A+ Y ++P DADNLTRWG ALLELSQ + +S K + +A SK EEAL IDP K LW LGNA TS GF T+D +A F+KA++CFQ+AVD EP N+LY+KSL++S+KAPELHME+H+ +Q + SD YD+FGWV+L VG+V WVG+A S PP R Sbjct: 5 AMSDPERMFFFDLACQNAKVTYEQNPHDADNLTRWGGALLELSQMRNGPESLKCLEDAESKLEEALKIDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDVEPANDLYRKSLDLSSKAPELHMEIHRQMASQASQAASSTSNTRQSRKKKDSDFWYDVFGWVVLGVGMVVWVGLAKSNAPPQAPR 201
BLAST of CX047428 vs. ExPASy Swiss-Prot
Match: TOM20_ORYSJ (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. japonica GN=TOM20 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 7.061e-46 Identity = 96/198 (48.48%), Postives = 127/198 (64.14%), Query Frame = -3 Query: 260 SQSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQT-LXXXXXXXXXXXXXXXXSDLKYDIFGWVILAVGIVAWVGMANSRIPPPPAR 850 + SD +R+ + + A+ Y ++P DADNLTRWG ALLELSQ + +S K + +A SK EEAL IDP K LW LGNA TS GF T+D +A F+KA++CFQ+AVD EP N+LY+KSL++S+KAPELHME+H+ +Q + SD YD+FGWV+L VG+V WVG+A S PP R Sbjct: 5 AMSDPERMFFFDLACQNAKVTYEQNPHDADNLTRWGGALLELSQMRNGPESLKCLEDAESKLEEALKIDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDVEPANDLYRKSLDLSSKAPELHMEIHRQMASQASQAASSTSNTRQSRKKKKDSDFWYDVFGWVVLGVGMVVWVGLAKSNAPPQAPR 202
BLAST of CX047428 vs. ExPASy Swiss-Prot
Match: TO204_ARATH (Mitochondrial import receptor subunit TOM20-4 OS=Arabidopsis thaliana GN=TOM20-4 PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.977e-45 Identity = 97/191 (50.79%), Postives = 128/191 (67.02%), Query Frame = -3 Query: 275 QSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTLXXXXXXXXXXXXXXXXSDLKYDIFGWVILAVGIVAWVGMANSRIP 847 Q++ +RL++ EH RK AEA Y K+PLDA+NLTRW ALLELSQF++ + K++I EAI K EALVIDP KH LW +GNAH S GFL++D +EA +F+KAS+ FQ AV+E+P +ELY+KSL +++KAPELH S+ KYD+FGWVILA +VAW+ ANS+ P Sbjct: 4 QNENERLMVFEHARKVAEATYVKNPLDAENLTRWAGALLELSQFQT--EPKQMILEAILKLGEALVIDPKKHDALWLIGNAHLSFGFLSSDQTEASDNFEKASQFFQLAVEEQPESELYRKSLTLASKAPELHTG---------GTAGPSSNSAKTMKQKKTSEFKYDVFGWVILASYVVAWISFANSQTP 183
BLAST of CX047428 vs. ExPASy Swiss-Prot
Match: TO201_ARATH (Mitochondrial import receptor subunit TOM20-1 OS=Arabidopsis thaliana GN=TOM20-1 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.335e-36 Identity = 86/187 (45.99%), Postives = 115/187 (61.50%), Query Frame = -3 Query: 281 DRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQT--LXXXXXXXXXXXXXXXXSDLKYDIFGWVILAVGIVAWVGMANSR 835 D+L E RK AE Y +P DADNL RWGEALLELSQF++V DS K+I +AISK E+A++IDP KH +W LGNA+TS LT D ++A+ +F A F AV ++P N++Y KSLE++ KAP+LH HK+ + + SD KY + GWVILA+G+VA + R Sbjct: 2 DKLNFFEEIRKDAEETYKLNPEDADNLMRWGEALLELSQFQNVIDSLKMIQDAISKLEDAILIDPMKHDAVWCLGNAYTSYARLTPDDTQARLNFGLAYLFFGIAVAQQPDNQVYHKSLEMADKAPQLHTGFHKNRLLSLLGGVETLAIPSPKVVKNKKSSDEKYIVMGWVILAIGVVACISFRKLR 188 The following BLAST results are available for this feature:
BLAST of CX047428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047428 ID=CX047428; Name=CX047428; organism=Citrus sinensis; type=EST; length=894bpback to top |