CX047421

Overview
NameCX047421
Unique NameCX047421
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 4.993e-89
Identity = 148/247 (59.92%), Postives = 197/247 (79.76%), Query Frame = -1
Query:  125 IIKNREKAMKAGEAANDDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPNYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 865
            II  R KA+KAGE   DDLLG+L+E++ +EI++ GN K+ G S+NDVIEECKLFYFAGQETT VLL WT +LLSKH +WQERAR+EVLQ FG NKP ++ LNHLK V MILYEVLRLYPPV  L++ V K+TKLG+ T+PAG Q+ LP +++H++  +WG DA+EF P RF +G++ A KN V+Y PF+ GPR+C+GQNFAL++AK+ +AMILQ + F+++PSYVHAP  + T+ P+ G+ +I +KL
Sbjct:  276 IINKRMKALKAGEPGEDDLLGVLLESNIQEIQKQGNKKDGGMSINDVIEECKLFYFAGQETTGVLLTWTTILLSKHPEWQERAREEVLQAFGKNKPEFERLNHLKYVSMILYEVLRLYPPVIDLTKIVHKDTKLGSYTIPAGTQVMLPTVMLHREKSIWGEDAMEFNPMRFVDGVANATKNNVTYLPFSWGPRVCLGQNFALLQAKLGLAMILQRFKFDVAPSYVHAPFTILTVQPQFGSHVIYKKL 522          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP3AO_SHEEP (Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.252e-30
Identity = 69/216 (31.94%), Postives = 128/216 (59.26%), Query Frame = -1
Query:  209 REKAMKAGEAANDDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 853
            +E  +K  +    D L +++ +  +  +E  N+K    S  +++ +  +F FAG ETTS  L++ + +L+ H D Q++ ++E+   F N  P  YD L  ++ + M++ E LR++P    L R   K+ ++  +++P G  + +P+ ++H+DP+LW  +  EF+PERF++  +K + N   Y PF  GPR C+G  FA++  K+A+  +LQN+SF+
Sbjct:  257 KESRLKDNQKPRVDFLQLMINS--QNSKETDNHK--ALSDQELMAQSVIFIFAGYETTSNTLSFLLYILATHPDVQQKLQEEIDATFPNKAPPTYDVLAQMEYLDMVVNETLRMFPIAVRLDRLCKKDVEIHGVSIPKGTAVTVPIFVLHRDPQLWP-EPEEFRPERFSKK-NKDSINPYVYLPFGTGPRNCIGMRFAIMNMKLAIVRVLQNFSFK 466          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: C13A1_CAEEL (Putative cytochrome P450 CYP13A1 OS=Caenorhabditis elegans GN=cyp-13A1 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.252e-30
Identity = 73/231 (31.60%), Postives = 121/231 (52.38%), Query Frame = -1
Query:  209 IKNREKAMKAGEAAND--DLLGILMETSFREIEEHGNNK----------NVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPNYDGLNHLKIVQMILYEVLRLYP-PVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 862
            IK RE+  K G    +  D + + ++    ++E  G N           N   +  +++ +C +F  AG +TT++ L++   LL+ H + Q++ ++EV +   N +   D L+ LK ++ +  E LRLYP      SR  ++ TKLGN+ +  G  I +    +H DP +WG DA +FKPER+    S     +  Y PF LGPR C+G   A +E K+ +  IL+ ++FE
Sbjct:  259 IKQREEDQKNGIEIGEPADFIDLFLDAKAEDVEHFGENNGDFSKSTTYTNRQLTTEEIVGQCTVFLIAGFDTTALSLSYATYLLATHPEIQKKLQEEVNRECPNPEVTIDQLSKLKYMECVFKEALRLYPLGAFANSRRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTFE 489          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: C13A2_CAEEL (Putative cytochrome P450 CYP13A2 OS=Caenorhabditis elegans GN=cyp-13A2 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.958e-30
Identity = 71/228 (31.14%), Postives = 130/228 (57.02%), Query Frame = -1
Query:  209 KNREKAMKAGEAANDDLLGILMETSFREIE------EHGNNKNVGF----SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPNYDGLNHLKIVQMILYEVLRLYPPVTVL-SRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 859
            + REK  ++GE    D + + ++    +++      E  + +N+      S ++V+ +C LF   G +TT++ L++   LL+ +   QE+  +E+ + FG ++  ++ L  LK +  ++ E LRLYP  ++  SR  +K T +  + + AGV + +    +H DPELWG D  EFKPER++    +  +++ +Y PF LGPR C+G   A++E K+ +  +L+NY+FE
Sbjct:  261 REREKGAESGEP--QDFIDLFLDARSDDVDFSAEAREDFSKRNLKITKELSADEVVGQCFLFLIGGFDTTALSLSYVTYLLAVNPKIQEKVIEEIAREFGTSEVEFEKLGRLKYMDCVIKEALRLYPLASISNSRKCMKTTTVNGVKIEAGVYVQMDTWSLHYDPELWGEDVKEFKPERWS--TDEPLEHKGAYLPFGLGPRQCIGMRLAIMEQKILLTHLLKNYTFE 484          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.528e-29
Identity = 70/204 (34.31%), Postives = 121/204 (59.31%), Query Frame = -1
Query:  209 DLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 814
            DLL +++ + + +E++ H +  N      +++ +  +F FAG ETTS  L+     L+ H D Q++ ++E+   F N  P  YD L  ++ + M++ E LRLYP    L R+  K+ ++  + +P G  + +P+ ++H+DP+LW  +  EF+PERF++   K   N  +Y PF  GPR C+G  FAL+  K+A+  +LQN+SF+
Sbjct:  270 DLLQLMINSQNSKEMDPHKSLSN-----EELVAQGIIFIFAGYETTSSALSLLAYELATHPDVQQKLQEEIEATFPNKAPPTYDALAQMEYLDMVVNETLRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLWP-EPEEFRPERFSKK-HKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFK 466          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP3AC_CANFA (Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A12 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.293e-28
Identity = 71/217 (32.72%), Postives = 122/217 (56.22%), Query Frame = -1
Query:  209 REKAMKAGEAANDDLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PNYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 853
            +E  +K  +    D L +++ + + +E++ H        S  +++ +  +F FAG ETTS  L++ M  L+ H D Q++ ++E+   F N   P YD L  ++ + M+L E LRLYP    L R   K+ ++  + +P G  + +P   +H+D  LW  +  EF+PERF+   +K + N  +Y PF  GPR C+G  FA++  K+A+  +LQN+SF+
Sbjct:  257 KESRLKDKQKHRVDFLQLMINSQNSKEMDTHK-----ALSDLELVAQSIIFIFAGYETTSTSLSFLMYELATHPDVQQKLQEEIDATFPNKALPTYDALVQMEYLDMVLNETLRLYPIAGRLERVCKKDVEISGVFIPKGTVVMVPTFTLHRDQSLWP-EPEEFRPERFSRK-NKDSINPYTYLPFGTGPRNCIGMRFAIMNMKLALVRVLQNFSFK 466          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: C13B1_CAEEL (Putative cytochrome P450 cyp-13B1 OS=Caenorhabditis elegans GN=cyp-13B1 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.293e-28
Identity = 76/219 (34.70%), Postives = 123/219 (56.16%), Query Frame = -1
Query:  218 IKNREKAMKAG-EAANDDLLGILMETSFREIE--EHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPNYDGLNHLKIVQMILYEVLRLYPPV-TVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNY 862
            I+ RE+  K G E A +D + + +     ++E  E G+      +  DVI  C +F  AG +TT+  L +   LL+KH +  + A++EV  V G+   +YD +  LK +  ++ E LRLYP      SR  +K T LG++ +  GV+I   ++ +H+  E+WG +A +F PER+ E    ++++ +S+ PF  GPR CVG    L EAK A+A +L+ Y
Sbjct:  262 IQEREENAKLGFENAENDFIDMFLNYYSEQVEDIEFGSTVEKKVTAEDVIGACFVFLLAGFDTTANSLAYASYLLAKHPEKMKLAQEEVDTVVGSENVSYDDMTKLKYLDAVVRESLRLYPVAWFACSRECVKPTTLGDIYIDKGVKIEADVMSLHRSKEIWGENADDFVPERWLE---PSSRHTMSWIPFGAGPRQCVGMRLGLSEAKTALAHLLRRY 477          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.206e-28
Identity = 69/219 (31.51%), Postives = 126/219 (57.53%), Query Frame = -1
Query:  209 KNREKAMKAGEAANDDLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 859
            K +E  +   +    DLL +++ + + +EI+ H    ++     +++ +  +F F G ETTS  L++ +  L+ H   Q++ ++E+   F N  P  YD L  ++ + M++ E LR++P    L R   K+ ++  +T+P G  + +P+ ++H +PELW  +  EF+PERF++  +K + N   Y PF  GPR C+G  FA++  K+A+  ILQN+SF+
Sbjct:  255 KIKESRLTDKQMNRVDLLQLMINSQNSKEIDNHKALSDI-----ELVAQSTIFIFGGYETTSSTLSFIIYELTTHPHVQQKLQEEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAGRLERVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELWP-EPEEFRPERFSKN-NKDSINPYVYLPFGTGPRNCLGMRFAIMNIKLALVRILQNFSFK 466          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: C13AA_CAEEL (Putative cytochrome P450 CYP13A10 OS=Caenorhabditis elegans GN=cyp-13A10 PE=2 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 2.206e-28
Identity = 72/228 (31.58%), Postives = 123/228 (53.95%), Query Frame = -1
Query:  206 NREKAMKAGEAANDDLLGILMETSFREIEEHGNNK----------NVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPNYDGLNHLKIVQMILYEVLRLYPPVTVL-SRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFEL 856
            +R+  ++ GE    D + + +E    ++E    N           N   +  +++ +C +F  AG +TT++ L++T  LL+ H + Q++ ++E+ +       ++D L+ LK +  I+ E LRLYP  T+  SR  ++ TKLGN+ +  G  + +    +H D ++WG DA EFKPER+ +        +  Y  F LGPR CVG   A +E KM +A IL+ Y+FE+
Sbjct:  265 DRKNGIEIGEP--QDFIDLFLEARADDVEHFQENNGDFSKTSSYGNRQLTTQEIVGQCLVFLIAGFDTTALSLSYTTFLLATHPEVQKKLQEEIERECIEPSISFDHLSKLKYMDCIIKETLRLYPLGTMANSRRCMRATKLGNVEVEVGTMVQVDTWSLHTDTKIWGDDAKEFKPERWLDPNCDQVFQKGGYISFGLGPRQCVGMRLAYMEEKMLLAHILRKYTFEV 490          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.882e-28
Identity = 69/202 (34.16%), Postives = 121/202 (59.90%), Query Frame = -1
Query:  191 ETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPNYDGLNHLKIVQMILYEVLRLYPPVTVL-SRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYV 793
            E  F + E    +K++ F  +++I +  +F  AG +TT++ L+++  LL+ H + Q++ ++EV +   + +  +D L+ LK ++ ++ E LRLYP  +++ +R  LK T +  + + AG  I +    +H DP++WG D  EFKPER+  G  +    +  Y PF +GPRIC+G   A++E KM +  IL+NY+FE +P  V
Sbjct:  296 EQDFAKSEVLKVDKHLTF--DEIIGQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDRECPDPEVTFDQLSKLKYLECVVKEALRLYPLASLVHNRKCLKTTNVLGMEIEAGTNINVDTWSLHHDPKVWGDDVNEFKPERWESG-DELFFAKGGYLPFGMGPRICIGMRLAMMEMKMLLTNILKNYTFETTPETV 494          
The following BLAST results are available for this feature:
BLAST of CX047421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C72A1_CATRO4.993e-8959.92Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
CP3AO_SHEEP5.252e-3031.94Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2... [more]
C13A1_CAEEL5.252e-3031.60Putative cytochrome P450 CYP13A1 OS=Caenorhabditis... [more]
C13A2_CAEEL8.958e-3031.14Putative cytochrome P450 CYP13A2 OS=Caenorhabditis... [more]
CP3AT_PIG1.528e-2934.31Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
CP3AC_CANFA1.293e-2832.72Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A1... [more]
C13B1_CAEEL1.293e-2834.70Putative cytochrome P450 cyp-13B1 OS=Caenorhabditi... [more]
CP3AS_BOVIN2.206e-2831.51Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2... [more]
C13AA_CAEEL2.206e-2831.58Putative cytochrome P450 CYP13A10 OS=Caenorhabditi... [more]
C13A7_CAEEL2.882e-2834.16Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A12-B23-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047421 ID=CX047421; Name=CX047421; organism=Citrus sinensis; type=EST; length=874bp
TTTTAAGCTTTGAATCTCAATACAAAATTAAATACATTAAACTTCATTAT
AAAAGAGTCTACATTGGCATCATGCTAATCTTATTGACAATATATAGTTG
CCGGTATTAATTATTTTTGCACCTTAGTTTCCGTAGAATCAATTGGGTAC
CCAGTTCCGGATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGAT
GGAGACAACTCGAATGAGTAGTTTTGAAGAATCATTGCCATGGCCATTTT
TGCTTCTACTAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCAATG
CGAATGGGAAATATGAAACTTGATTTTTGGCCGCCTTTGAAATTCCTTCC
GCAAACCTTTCCGGCTTAAACTCAACTGCATCGTAACCCCAAAGTTCAGG
ATCCTGGTGAACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGTA
ATGTCAAGTTTCCGAGTTTCGTTTCCTTAAGAACAGATCGACTAAGCACA
GTTACAGGCGGATAAAGCCTGAGTACCTCGTAAAGTATCATCTGGACAAT
TTTGAGGTGATTCAATCCATCATAGTTGGGCTTATTATTGCCAAACACTT
GCAAAACCTCTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAAT
AAGACCATCGTCCAATTAAGCAAAACAGAGGTAGTCTCTTGGCCGGCAAA
GTAAAATAGCTTACACTCTTCGATCACATCGTTCATGCTGAACCCAACAT
TTTTGTTATTTCCATGTTCTTCAATCTCTCTAAAACTGGTTTCCATCAGT
ATGCCTAACAAGTCATCGTTCGCAGCTTCCCCTGCTTTCATTGCCTTCTC
CCTATTTTTGATGATTCCCATCAA
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