CX047409

Overview
NameCX047409
Unique NameCX047409
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4721 contig Csv1_Contig4721:13..782. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX047409 vs. ExPASy Swiss-Prot
Match: OLEO1_PRUDU (Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.682e-42
Identity = 91/132 (68.94%), Postives = 106/132 (80.30%), Query Frame = -3
Query:  328 EHYQP--HEQTQLQSRQPRSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQF 717
            +H+Q   H Q     +QPRS+Q         AGGSLLVLSGL +AGTVIALTIATPLLVI SPVLVPA+ITV+L+ MGFL SGGFGVAA++VLSWIY+YVTG  PPGADQL+QAR KLA KAR+++DRAEQF
Sbjct:    4 QHFQQPLHFQGSYGQQQPRSYQVAKAATAVTAGGSLLVLSGLVLAGTVIALTIATPLLVIFSPVLVPALITVALITMGFLTSGGFGVAAVTVLSWIYKYVTGKQPPGADQLDQARHKLAGKARDIKDRAEQF 135          
BLAST of CX047409 vs. ExPASy Swiss-Prot
Match: OLEO1_ARATH (Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25140 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.168e-35
Identity = 77/127 (60.63%), Postives = 98/127 (77.17%), Query Frame = -3
Query:  328 EQTQLQSR---QPRSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQF 699
            +Q Q+  R     +S Q         AGGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV+LLI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL SKA++++DRA+ +
Sbjct:   26 DQYQMSGRGSDYSKSRQIAKAATAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQYY 152          
BLAST of CX047409 vs. ExPASy Swiss-Prot
Match: OLEO3_BRANA (Oleosin Bn-III OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.601e-35
Identity = 73/114 (64.04%), Postives = 93/114 (81.58%), Query Frame = -3
Query:  328 RSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQF 669
            +S Q         AGGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV++LI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL SKA++++DRA+ +
Sbjct:   53 KSRQIAKAVTAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVAMLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQYY 166          
BLAST of CX047409 vs. ExPASy Swiss-Prot
Match: OLEO2_BRANA (Major oleosin NAP-II (Fragment) OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.795e-35
Identity = 73/114 (64.04%), Postives = 91/114 (79.82%), Query Frame = -3
Query:  328 RSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQF 669
            +S Q         AGGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV+LLI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL  K ++M+DRA+ +
Sbjct:   41 KSRQIAKAVTAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGGKVQDMKDRAQYY 154          
BLAST of CX047409 vs. ExPASy Swiss-Prot
Match: OLEO5_BRANA (Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.180e-33
Identity = 72/111 (64.86%), Postives = 88/111 (79.28%), Query Frame = -3
Query:  337 RSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRA 669
            +S Q         AG SLLVLS LT+ GTVIAL +ATPLLVI SP+LVPA+ITV+LLI GFL+SG FG+AAI+V SWIY+Y TG HP G+D+L+ ARMKL SKA++M+DRA
Sbjct:   41 KSRQIAKATTAVTAGDSLLVLSSLTLVGTVIALIVATPLLVIFSPILVPALITVALLITGFLSSGAFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDMKDRA 151          
BLAST of CX047409 vs. ExPASy Swiss-Prot
Match: OLEO1_MAIZE (Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.208e-32
Identity = 69/123 (56.10%), Postives = 90/123 (73.17%), Query Frame = -3
Query:  334 HEQTQLQSRQPRSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAE 702
            H + Q Q +Q               GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I ++L+  GF+ SGG GVAA+SV SW+Y+Y+TG HPP ADQL+ A+ +LASKAR+++D A+
Sbjct:   25 HGEAQQQQKQGAMMTALKAATAATFGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPAADQLDHAKARLASKARDVKDAAQ 147          
BLAST of CX047409 vs. ExPASy Swiss-Prot
Match: OLE16_BROSE (Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.578e-32
Identity = 70/122 (57.38%), Postives = 92/122 (75.41%), Query Frame = -3
Query:  334 EQTQLQSRQPRSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAE 699
            +  Q Q +QP             AGGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I+++L+  GF+ SGG GVAA+SV SW+Y+Y+ G HPPGADQL+ A+ +LASKAR+++D A+
Sbjct:   37 DDEQHQQKQPVMMCALKAATAATAGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAISMALMSAGFVTSGGLGVAAVSVFSWMYKYLAGKHPPGADQLDHAKARLASKARDIKDAAQ 158          
BLAST of CX047409 vs. ExPASy Swiss-Prot
Match: OLEO1_ORYSJ (Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=OLE16 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.515e-32
Identity = 65/98 (66.33%), Postives = 85/98 (86.73%), Query Frame = -3
Query:  334 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAE 627
            GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I ++L+  GF+ SGG GVAA+SV SW+Y+Y+TG HPPGADQL+ A+ +LASKAR++++ A+
Sbjct:   42 GGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPGADQLDHAKARLASKARDIKEAAQ 139          
BLAST of CX047409 vs. ExPASy Swiss-Prot
Match: OLEO3_ARATH (Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.279e-31
Identity = 69/123 (56.10%), Postives = 92/123 (74.80%), Query Frame = -3
Query:  346 HYQPHEQTQLQSRQPRSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMR 714
            H++   +   Q   P++ Q         AGGSLLVLSGLT+AGTVIALT+ATPLLVI SPVLVPAV+TV+L+I GFLASGGFG+AAI+  SW+YR++TG    G+D++E ARMK+ S+ ++ +
Sbjct:    8 HHEMISRDSTQEAHPKARQMVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSPVLVPAVVTVALIITGFLASGGFGIAAITAFSWLYRHMTGS---GSDKIENARMKVGSRVQDTK 127          
BLAST of CX047409 vs. ExPASy Swiss-Prot
Match: OLEO1_SOYBN (P24 oleosin isoform A OS=Glycine max PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.098e-17
Identity = 46/116 (39.66%), Postives = 65/116 (56.03%), Query Frame = -3
Query:  331 RQPRSHQXXXXXXXXXAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQARMKLASKAREMRDRAEQ 678
            R P + Q          GG LL+L+GLT+AGT+  L +ATPL V+ SPVLVPA + + L + GFL SG FG+ A+S  SWI  Y+    P   +    A+  LA  A  +  + ++
Sbjct:   49 RGPTTSQVLAVLAGLPVGGILLLLAGLTLAGTLTGLAVATPLFVLFSPVLVPATVAIGLAVAGFLTSGAFGLTALSSFSWILNYIRETQPASENLAAAAKHHLAEAAEYVGQKTKE 164          
The following BLAST results are available for this feature:
BLAST of CX047409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
OLEO1_PRUDU1.682e-4268.94Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1[more]
OLEO1_ARATH1.168e-3560.63Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25... [more]
OLEO3_BRANA2.601e-3564.04Oleosin Bn-III OS=Brassica napus PE=2 SV=1[more]
OLEO2_BRANA5.795e-3564.04Major oleosin NAP-II (Fragment) OS=Brassica napus ... [more]
OLEO5_BRANA3.180e-3364.86Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=... [more]
OLEO1_MAIZE1.208e-3256.10Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2[more]
OLE16_BROSE1.578e-3257.38Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 S... [more]
OLEO1_ORYSJ3.515e-3266.33Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=... [more]
OLEO3_ARATH2.279e-3156.10Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE... [more]
OLEO1_SOYBN1.098e-1739.66P24 oleosin isoform A OS=Glycine max PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A06_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A06-B11-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047409 ID=CX047409; Name=CX047409; organism=Citrus sinensis; type=EST; length=770bp
TTTAATAACAACCAAATTTTGTAAAATTAAAGAAACTGAAAAGTTAAAAC
AAAAATCACAAGACATATTACATTTCAAAGACCAATAATAAAAACCCTGC
AAGAGCGCCCCACCACATTAACAAAACTTATTACAAAGATTACCACGAAT
ACAAAAAAGGAAAAAACACATTGACACAAATTAACACAAAAGACAACCAA
TGACCCCTCAACTAGTATCATAGCCGTTTGATCTCCACCCATATCTTTAT
CAACCAACAACCCTTCATCACATGCATAACTACGTAGTTTAAGAACCCGG
CTGCGAGCCAGTGCTTTGCTGCTGCCCAAACTGCTCAGCCCTGTCCCTCA
TCTCCCTAGCCTTACTGGCCAGCTTCATCCGCGCCTGCTCCAGCTGATCC
GCCCCTGGTGGGTGCCCCCCTGTGACATACCTATAAATCCATGATAAGAC
GCTGATGGCTGCTACACCGAATCCGCCAGAGGCCAAGAACCCCATGATGA
GAAGAGAAACGGTGATAACCGCAGGGACAAGAACAGGACTACATATGACT
AGCAGTGGAGTAGCAATGGTCAGTGCAATGACAGTCCCAGCCATGGTTAA
GCCAGAGAGGACCAACAGAGACCCACCGGCTGTGACGGCGGTTGCCGCCT
TCACGACCTGGTGGGACCGGGGCTGACGGCTCTGCAGCTGTGTCTGCTCG
TGTGGTTGGTAATGTTCAGCCATATCAGTGTTGATGTTAAATCTAACGGC
GATTATTTGTCGATGATCCT
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