FC921969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921969 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 5.035e-31 Identity = 59/85 (69.41%), Postives = 66/85 (77.65%), Query Frame = 1 Query: 7 RTIFFLTPAGTLTPIAIELTRPPMNGKPQWKQVFLPSSKSTECWLWKLAKAHVLAHDAGYHQLVSHWLRNHCCTETYLISTNRQL 261 RT+FFL+ GTL P+AIELTRP KPQWK+ F S +TE WLWKLAKAHVL HD GYHQLVSHWLR H C E Y+I+TNRQL Sbjct: 491 RTVFFLSDEGTLMPLAIELTRPQSPTKPQWKRAFTHGSDATESWLWKLAKAHVLTHDTGYHQLVSHWLRTHACVEPYIIATNRQL 575
BLAST of FC921969 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.588e-31 Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 1 Query: 7 RTIFFLTPAGTLTPIAIELTRPPMNGKPQWKQVFLPSSKSTECWLWKLAKAHVLAHDAGYHQLVSHWLRNHCCTETYLISTNRQL 261 RT+FFL+ TL P+AIELT PP KPQWKQVF P +T CWLW LAK H ++HDAGYHQL+SHWLR H CTE Y+I+ NRQL Sbjct: 489 RTLFFLSDDSTLRPVAIELTCPPNINKPQWKQVFTPGYDATSCWLWNLAKTHAISHDAGYHQLISHWLRTHACTEPYIIAANRQL 573
BLAST of FC921969 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.608e-29 Identity = 59/87 (67.82%), Postives = 65/87 (74.71%), Query Frame = 1 Query: 7 RTIFFLTPAGTLTPIAIELTRPPMNGKPQWKQVFLPSSKS--TECWLWKLAKAHVLAHDAGYHQLVSHWLRNHCCTETYLISTNRQL 261 R +FFLT GTL PIAIELTRP KPQW+QVF P T WLW+LAKAH+LAHDAG HQLVSHWLR H CTE Y+I+ NRQL Sbjct: 520 RALFFLTADGTLRPIAIELTRPKSKKKPQWRQVFTPGCDGSVTGSWLWQLAKAHILAHDAGVHQLVSHWLRTHACTEPYIIAANRQL 606
BLAST of FC921969 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.712e-29 Identity = 54/85 (63.53%), Postives = 68/85 (80.00%), Query Frame = 1 Query: 7 RTIFFLTPAGTLTPIAIELTRPPMNGKPQWKQVFLPSSKSTECWLWKLAKAHVLAHDAGYHQLVSHWLRNHCCTETYLISTNRQL 261 RTIFFLT GTL +AIELTRP +PQW+QVF PS+ +T+ WLW++AKAHV AHDAG+H+L++HWLR HC E Y+I+ NRQL Sbjct: 533 RTIFFLTDDGTLRLLAIELTRPASPSQPQWRQVFTPSTDTTKSWLWRMAKAHVRAHDAGHHELITHWLRTHCAVEPYIIAANRQL 617
BLAST of FC921969 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 1.371e-28 Identity = 53/85 (62.35%), Postives = 67/85 (78.82%), Query Frame = 1 Query: 7 RTIFFLTPAGTLTPIAIELTRPPMNGKPQWKQVFLPSSKSTECWLWKLAKAHVLAHDAGYHQLVSHWLRNHCCTETYLISTNRQL 261 RT+FFLT GTL +AIELTRP +PQW+QVF PS+ +T WLW++AKAHV AHDAG+H+L++HWLR HC E Y+I+ NRQL Sbjct: 516 RTVFFLTDDGTLQLLAIELTRPASPSQPQWRQVFTPSTDATMSWLWRMAKAHVRAHDAGHHELITHWLRTHCAVEPYIIAANRQL 600
BLAST of FC921969 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.760e-27 Identity = 56/89 (62.92%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 7 RTIFFLTPAGTLTPIAIELTRPPMNGKPQWKQVFLPSS----KSTECWLWKLAKAHVLAHDAGYHQLVSHWLRNHCCTETYLISTNRQL 261 RT+FFL GTL PIAIELTRP K QW++VF P S T W W+LAK HVL+HD GYHQLVSHWLR HCC E Y+I+ NRQL Sbjct: 519 RTLFFLADDGTLRPIAIELTRPKSPHKQQWRKVFTPGSGYSGSVTGSWEWQLAKIHVLSHDTGYHQLVSHWLRTHCCVEPYVIAANRQL 607
BLAST of FC921969 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 2.265e-23 Identity = 49/86 (56.98%), Postives = 65/86 (75.58%), Query Frame = 1 Query: 7 RTIFFLTPAGTLTPIAIELTRPPM-NGKPQWKQVFLPSSKSTECWLWKLAKAHVLAHDAGYHQLVSHWLRNHCCTETYLISTNRQL 261 R +FFLT AGTL PIAIEL PPM +G + K+VF P + +T WLW+LAKAHV ++DAG HQL++HWLR H C E ++I+ +RQ+ Sbjct: 493 RAVFFLTAAGTLKPIAIELCLPPMTDGCKRAKRVFTPPADATSNWLWQLAKAHVCSNDAGVHQLINHWLRTHACMEPFIIAAHRQM 578
BLAST of FC921969 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.468e-22 Identity = 47/85 (55.29%), Postives = 62/85 (72.94%), Query Frame = 1 Query: 7 RTIFFLTPAGTLTPIAIELTRPPMNGKPQWKQVFLPSSKSTECWLWKLAKAHVLAHDAGYHQLVSHWLRNHCCTETYLISTNRQL 261 RTIFFLT GTL P+AIEL+ PP K + K+V P +T W+W+LAKAHV ++DAG HQLV+HWLR H C E ++++ +RQL Sbjct: 513 RTIFFLTRLGTLKPVAIELSLPPHGPKHRSKRVLTPPVDATSNWMWQLAKAHVSSNDAGVHQLVNHWLRTHACLEPFILAAHRQL 597
BLAST of FC921969 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 6.169e-21 Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 7 RTIFFLTPAGTLTPIAIELTRPPMN-GKPQWKQVFLPSSKSTECWLWKLAKAHVLAHDAGYHQLVSHWLRNHCCTETYLISTNRQL 261 RTIFFLT AGTL PIAIEL+ PP G+P+ +V P +T WLW LAKAHV ++DAG HQLV+HWLR H E ++++ +R + Sbjct: 507 RTIFFLTEAGTLKPIAIELSLPPAKPGEPRPSKVLTPPYDATSNWLWMLAKAHVSSNDAGVHQLVNHWLRTHATMEPFILAAHRHM 592
BLAST of FC921969 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.820e-20 Identity = 44/87 (50.57%), Postives = 63/87 (72.41%), Query Frame = 1 Query: 7 RTIFFLTPAGTLTPIAIELTRPPMNGKPQW--KQVFLPSSKSTECWLWKLAKAHVLAHDAGYHQLVSHWLRNHCCTETYLISTNRQL 261 RTIFFL GTLTP+AIEL++P G+ +V++P+S+ E ++W LAKA+V+ +DA YHQ++SHWL H E ++I+TNRQL Sbjct: 446 RTIFFLKDDGTLTPLAIELSKPHPQGEEYGPVSEVYVPASEGVEAYIWLLAKAYVVVNDACYHQIISHWLSTHAIVEPFVIATNRQL 532 The following BLAST results are available for this feature:
BLAST of FC921969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921969 ID=FC921969; Name=FC921969; organism=Citrus sinensis; type=EST; length=266bpback to top |