CX047405

Overview
NameCX047405
Unique NameCX047405
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4114 contig Csv1_Contig4114:88..947. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 4.550e-79
Identity = 133/212 (62.74%), Postives = 167/212 (78.77%), Query Frame = -3
Query:  232 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRG---RGMCGMNTMVSAV 858
            K QG+CGSCW+FS +GA+EGA+++ATG L  LSEQQ VDCDH CD  E  +CD+GC+GGLMT A+ YL  AGGLE E  YPY G  GKC+FD  KI   V NF+ + VDE QI+A+L+ HGPLAIG+NA +MQTYIGGVSCP ICG+  L+HGVLLVGYGA GF+ +RL ++P+WIIKNSWG+ WG++GYY++CRG   R  CG+++MVS V
Sbjct:  153 KNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKCKFDKSKIVASVQNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGRH-LDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMVSTV 363          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.729e-78
Identity = 124/215 (57.67%), Postives = 172/215 (80.00%), Query Frame = -3
Query:  214 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVVTQASS 858
            K QG+CGSCWAFSTTGA+EGA+++ATG L+SLSEQQLVDCDH CD ++ G+CD+GC+GGLM NA++YL+ +GG+ +E  Y Y G+ G C+FD  K+   V+NF+ + +DE+QIAA+LV +GPLA+ +NA +MQTY+ GVSCP +C K  L+HGVLLVG+G   ++ +RL  +P+WIIKNSWG+ WG+ GYY++CRGR +CG+++MVS V    S+
Sbjct:  148 KDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGSCKFDKSKVVASVSNFSVVTLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSMVSTVAAAQSN 362          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 5.031e-78
Identity = 130/216 (60.19%), Postives = 171/216 (79.17%), Query Frame = -3
Query:  214 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGK-CQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVVTQASS 858
            K QG+CGSCW+FS TGA+EGANF+ATG L+SLSEQQLVDCDH CD +E  +CD+GC+GGLM +A++Y +  GGL +E  YPY GK GK C+ D  KI   V+NF+ I +DE QIAA+LV +GPLA+ +NA +MQTYIGGVSCP IC ++ LNHGVLLVGYGA G++  R   +P+WIIKNSWG+ WG++G+Y++C+GR +CG+++MVS V    S+
Sbjct:  151 KNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRR-LNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMVSTVAATVST 365          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 6.571e-78
Identity = 127/215 (59.07%), Postives = 172/215 (80.00%), Query Frame = -3
Query:  217 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIG-KRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVVTQAS 858
            K QG+CGSCW+FSTTGA+EGA+F+ATG L+SLSEQQLVDCDH CD +E+G+CD+GC+GGLM +A++Y +  GGL  E  YPY G   G C+ D  KI   V+NF+ + ++E+QIAA+L+ +GPLA+ +NA +MQTYIGGVSCP IC ++ LNHGVLLVGYG+ GFS  RL  +P+WIIKNSWG+ WG++G+Y++C+GR +CG++++VS V    S
Sbjct:  148 KNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPYICSRR-LNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLVSTVAATTS 361          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 4.896e-57
Identity = 108/212 (50.94%), Postives = 143/212 (67.45%), Query Frame = -3
Query:  229 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSC-DIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRG-KCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVV 858
            K QG CGSCW+FSTTG VEG +FI+   L+SLSEQ LVDCDH C + + +  CD GC+GGL  NAY Y+I  GG++ ESSYPY  + G +C F+S  I  +++NFT IP +E  +A ++V  GPLAI  +A+  Q YIGGV   + C    L+HG+L+VGY AK  +I R  N P+WI+KNSWG  WG+ GY  L RG+  CG++  VS  +
Sbjct:  134 KNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGV-FDIPCNPNSLDHGILIVGYSAKN-TIFR-KNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSI 342          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.315e-53
Identity = 102/212 (48.11%), Postives = 138/212 (65.09%), Query Frame = -3
Query:  229 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCP--LICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVV 858
            K QG CGSCWAFSTTG VE   F  TG LLSLSEQQLVDCD           D+GC+GGL +NAY+ +I  GGL  E +YPY  K  KC   ++ +AV + +  N+  DE ++AA L H+  +++G+NA+ +Q Y  G+S P  + C K  L+H VLLVGYG          N+PFWI+KNSWG +WG++GY+R+ RG G CG+NT+ ++ +
Sbjct:  121 KNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDG---------LDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKNEKCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSE------KNEPFWIVKNSWGVEWGENGYFRMYRGDGSCGINTVATSAM 317          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.438e-50
Identity = 100/213 (46.95%), Postives = 135/213 (63.38%), Query Frame = -3
Query:  229 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCP--LICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVV 858
            K QG+CGSCWAFS TG +EG   + TG L   SEQ+L+DCD         T D+ C+GGLM NAYK +   GGLE E+ YPY  K+ +C F+     V+VA F ++P  +E  +   L+ +GP++IG+NA  MQ Y GGVS P   +C KK L+HGVL+VGYG   +        P+WI+KNSWG +WG+ GYYR+ RG   CG++ M ++ V
Sbjct:  410 KNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFH-KTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAV 612          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.062e-47
Identity = 99/212 (46.70%), Postives = 124/212 (58.49%), Query Frame = -3
Query:  229 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPL--ICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVV 858
            K QG CGSCWAFS TG VEG  F+  G LLSLSEQ+L+DCD           D  C GGL +NAY  +   GGLE E  Y Y G    C F +EK  V + +   +  +E ++AA L   GP+++ +NA  MQ Y  G+S PL  +C    ++H VLLVGYG +        + PFW IKNSWG  WG+ GYY L RG G CG+NTM S+ V
Sbjct:  287 KDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKM---------DKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAV 482          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.336e-46
Identity = 97/212 (45.75%), Postives = 124/212 (58.49%), Query Frame = -3
Query:  229 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPL--ICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVV 858
            K QG CGSCWAFS TG VEG  F+  G LLSLSEQ+L+DCD           D  C GGL +NAY  +   GGLE E  Y Y G    C F ++   V + +   +  +EN+IAA L   GP+++ +NA  MQ Y  G++ P   +C   +++H VLLVGYG +        N P+W IKNSWG  WG+ GYY L RG G CG+NTM S+ V
Sbjct:  265 KNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDK---------VDKACLGGLPSNAYAAIKNLGGLETEDDYGYQGHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNR-------SNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASSAV 460          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.753e-44
Identity = 94/215 (43.72%), Postives = 129/215 (60.00%), Query Frame = -3
Query:  229 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAA--GGLEEESSYPYI---GKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGMNTMVSAVV 858
            K+QG CGSCWAFST G +EG   +A   L+SLSEQ LV CD         T D+GC+GGLM NA+ +++ +  G +  E+SYPY+   G++ +CQ +  +I   + +  ++P DE+ IAA+L  +GPLAI ++A     Y GG+     C  K L+HGVLLVGY           N P+WIIKNSW   WG+ GY R+ +G   C MN  VS+ V
Sbjct:  142 KVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDAESFMDYNGGILTS--CTSKQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 338          
The following BLAST results are available for this feature:
BLAST of CX047405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
CYSP1_MAIZE4.550e-7962.74Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CYSP_PEA1.729e-7857.67Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
RD19A_ARATH5.031e-7860.19Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
A494_ARATH6.571e-7859.07Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP1_DICDI4.896e-5750.94Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATL_SCHMA7.315e-5348.11Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CPR1_DROME4.438e-5046.95Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATF_HUMAN2.062e-4746.70Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATF_MOUSE1.336e-4645.75Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CYSP_TRYBB4.753e-4443.72Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A03-B5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047405 ID=CX047405; Name=CX047405; organism=Citrus sinensis; type=EST; length=860bp
TTTTTTTTTTTTTTTTTAGAAGAGCAGGTCTGAAAAGCATTTTCAACTCT
AATCCAGAACTTACTTGAGAAAAGGGAATTATGAAACCGGAAAAGCTTCA
ATAATTAGAAGATCACGAACAAGAACAAAAGGGAAACTAGCTACCATTTA
ACATGAGCTGTCTATATTGCTTTCTGTAGATATTCCAACTTAATAAGAGG
GACTTCAAGTTTAGGAGGAGGCTTGAGTGACCACTGCAGAAACCATGGTG
TTCATTCCACACATGCCACGCCCTCGGCAGAGCCGGTAGTACCCATGGTC
TCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAAAACGGCTGGTTTC
CAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGACAAGCAGAACG
CCGTGGTTGAGCCATTTCTTGCCGCAGATTAGGGGGCATGAGACTCCCCC
AATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCCAGAGGACCGT
GGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGGAATATTGGTA
AAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATTGGCATTTGCC
ACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGCCCTCCAGCCG
CGATCAAATATTTGTATGCATTTGTCATGAGGCCTCCAGAACAACCATTG
TCACAAGTACCCTTCTCCTTTATATCACACGAGTGATCACAATCTACAAG
CTGCTGCTCGCTAAGACTCAGAAGATTCCCAGTCGCAATGAAGTTGGCTC
CTTCAACAGCTCCTGTAGTGCTAAAAGCCCAGCATGACCCACATGCTCCC
TGCATCTTGA
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