CX047403

Overview
NameCX047403
Unique NameCX047403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_PASMU (Naphthoate synthase OS=Pasteurella multocida GN=menB PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.790e-51
Identity = 97/146 (66.44%), Postives = 117/146 (80.14%), Query Frame = -1 
Query:  290 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKFPWRP 727
            +CD TIAADNAIFGQTGPKVGSFD G+G+S M+R+VG KKARE+WFL R Y A+EA +MGLVNTVVP  +LE+ET++W RE+LRNSP A+R LK+ALNA  DG AGLQ L G+A ++FY  EEG EG+ AF E+R PDF KF   P
Sbjct:  140 ICDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAKEALEMGLVNTVVPYAELEKETVRWCREMLRNSPIALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNEKRAPDFSKFKRNP 285
[Close]
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_STAAW (Naphthoate synthase OS=Staphylococcus aureus (strain MW2) GN=menB PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.513e-50
Identity = 95/146 (65.07%), Postives = 118/146 (80.82%), Query Frame = -1 
Query:  290 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKFPWRP 727
            VCD TIAADNAIFGQTGPKVGSFDAGYGS  ++R+VG KKARE+W+L R Y A+EA  MGLVNTVVPLEK+E ET++W +EI+++SPTA+R LK+A+NA  DG AGLQ + GDA L++Y  +E  EG+ AF E+R PDF +FP  P
Sbjct:  128 VCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP 273
[Close]
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_STAAS (Naphthoate synthase OS=Staphylococcus aureus (strain MSSA476) GN=menB PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.513e-50
Identity = 95/146 (65.07%), Postives = 118/146 (80.82%), Query Frame = -1 
Query:  290 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKFPWRP 727
            VCD TIAADNAIFGQTGPKVGSFDAGYGS  ++R+VG KKARE+W+L R Y A+EA  MGLVNTVVPLEK+E ET++W +EI+++SPTA+R LK+A+NA  DG AGLQ + GDA L++Y  +E  EG+ AF E+R PDF +FP  P
Sbjct:  128 VCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP 273
[Close]
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_STAAR (Naphthoate synthase OS=Staphylococcus aureus (strain MRSA252) GN=menB PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.513e-50
Identity = 95/146 (65.07%), Postives = 118/146 (80.82%), Query Frame = -1 
Query:  290 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKFPWRP 727
            VCD TIAADNAIFGQTGPKVGSFDAGYGS  ++R+VG KKARE+W+L R Y A+EA  MGLVNTVVPLEK+E ET++W +EI+++SPTA+R LK+A+NA  DG AGLQ + GDA L++Y  +E  EG+ AF E+R PDF +FP  P
Sbjct:  128 VCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP 273
[Close]
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_STAAC (Naphthoate synthase OS=Staphylococcus aureus (strain COL) GN=menB PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.513e-50
Identity = 95/146 (65.07%), Postives = 118/146 (80.82%), Query Frame = -1 
Query:  290 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKFPWRP 727
            VCD TIAADNAIFGQTGPKVGSFDAGYGS  ++R+VG KKARE+W+L R Y A+EA  MGLVNTVVPLEK+E ET++W +EI+++SPTA+R LK+A+NA  DG AGLQ + GDA L++Y  +E  EG+ AF E+R PDF +FP  P
Sbjct:  128 VCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP 273
[Close]
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_STAES (Naphthoate synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=menB PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.580e-50
Identity = 94/146 (64.38%), Postives = 118/146 (80.82%), Query Frame = -1 
Query:  290 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKFPWRP 727
            VCD TIAADNAIFGQTGPKVGSFDAGYGS  ++R+VG KKARE+W+L R Y A+EA  MGLVNTVVPLE++E ET+KW ++I+++SPTA+R LK+A+NA  DG AGLQ + GDA L++Y  +E  EG+ AF E+R PDF +FP  P
Sbjct:  127 VCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEQVEDETVKWCKDIMQHSPTALRFLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRNPDFDQFPKFP 272
[Close]
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_STAEQ (Naphthoate synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=menB PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.580e-50
Identity = 94/146 (64.38%), Postives = 118/146 (80.82%), Query Frame = -1 
Query:  290 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKFPWRP 727
            VCD TIAADNAIFGQTGPKVGSFDAGYGS  ++R+VG KKARE+W+L R Y A+EA  MGLVNTVVPLE++E ET+KW ++I+++SPTA+R LK+A+NA  DG AGLQ + GDA L++Y  +E  EG+ AF E+R PDF +FP  P
Sbjct:  127 VCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEQVEDETVKWCKDIMQHSPTALRFLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRNPDFDQFPKFP 272
[Close]
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_HAEIN (Naphthoate synthase OS=Haemophilus influenzae GN=menB PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.580e-50
Identity = 98/146 (67.12%), Postives = 115/146 (78.77%), Query Frame = -1 
Query:  290 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKFPWRP 727
            +CD TIAA+NAIFGQTGPKVGSFD G+G+S M+RLVG KKARE+WFL R Y A+EA  MGLVNTVVP   LE+ET++W RE+LRNSP AIR LK+ALNA  DG AGLQ L G+A ++FY  EEG EG+ AF E+R PDF KF   P
Sbjct:  140 LCDLTIAAENAIFGQTGPKVGSFDGGWGASYMARLVGQKKAREIWFLCRQYNAQEALDMGLVNTVVPYADLEKETVRWCREMLRNSPIAIRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNEKRAPDFSKFRRNP 285
[Close]
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_STAAN (Naphthoate synthase OS=Staphylococcus aureus (strain N315) GN=menB PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.370e-50
Identity = 94/146 (64.38%), Postives = 118/146 (80.82%), Query Frame = -1 
Query:  290 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKFPWRP 727
            VCD TIAADNAIFGQTGPKVGSFDAGYGS  ++R+VG KKARE+W+L R Y A+EA  MGLVNTVVPL+K+E ET++W +EI+++SPTA+R LK+A+NA  DG AGLQ + GDA L++Y  +E  EG+ AF E+R PDF +FP  P
Sbjct:  128 VCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLDKVEDETVQWCKEIMKHSPTALRFLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP 273
[Close]
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_STAAM (Naphthoate synthase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=menB PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.370e-50
Identity = 94/146 (64.38%), Postives = 118/146 (80.82%), Query Frame = -1 
Query:  290 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKFPWRP 727
            VCD TIAADNAIFGQTGPKVGSFDAGYGS  ++R+VG KKARE+W+L R Y A+EA  MGLVNTVVPL+K+E ET++W +EI+++SPTA+R LK+A+NA  DG AGLQ + GDA L++Y  +E  EG+ AF E+R PDF +FP  P
Sbjct:  128 VCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLDKVEDETVQWCKEIMKHSPTALRFLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP 273
The following BLAST results are available for this feature:
BLAST of CX047403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
MENB_PASMU6.790e-5166.44Naphthoate synthase OS=Pasteurella multocida GN=me... [more]
MENB_STAAW1.513e-5065.07Naphthoate synthase OS=Staphylococcus aureus (stra... [more]
MENB_STAAS1.513e-5065.07Naphthoate synthase OS=Staphylococcus aureus (stra... [more]
MENB_STAAR1.513e-5065.07Naphthoate synthase OS=Staphylococcus aureus (stra... [more]
MENB_STAAC1.513e-5065.07Naphthoate synthase OS=Staphylococcus aureus (stra... [more]
MENB_STAES2.580e-5064.38Naphthoate synthase OS=Staphylococcus epidermidis ... [more]
MENB_STAEQ2.580e-5064.38Naphthoate synthase OS=Staphylococcus epidermidis ... [more]
MENB_HAEIN2.580e-5067.12Naphthoate synthase OS=Haemophilus influenzae GN=m... [more]
MENB_STAAN3.370e-5064.38Naphthoate synthase OS=Staphylococcus aureus (stra... [more]
MENB_STAAM3.370e-5064.38Naphthoate synthase OS=Staphylococcus aureus (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A01_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A01-B1-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047403 ID=CX047403; Name=CX047403; organism=Citrus sinensis; type=EST; length=727bp
TTTTTTTTTTTTTTTTTCCACATGTCAAATTGAACCTCTTAGCTGAACTA
AAGTTTCTAAAATCTTTTATTCAAAGGTTGGTTGGTCTCTTTGACAACTG
AAAACGTGCAACTAACAAAAAAAACCAGGTCTGCATCCCACAAATAAAAT
ACAAATACAACGTTTTATCTCAAATTATCCCCCTCCATTATTTTTTGATC
TTGAAAAAAAAAAAAGGGCCACAAAACCACCCCCTGCCGAAAAAGTTTAT
GTTGTTGGTTAAAATTAAGCTAAAAAACAGCAAGCGCTAAGGTCGCCAAG
GAAATTTCAAAAAGTCGGGGCGTCTGCGTTCCACAAATGCTGTCTTCCCT
TCACTACCTTCCTCGGGGCCATAAAATATGAGGGGGGCATCTCCCCCAAG
GGCCTGGAGTCCAGCATGGCCATCATCAACTGCATTGAGAGCTGATTTGA
GCACTCTAATAGCAGTCGGACTGTTTCTTAGGATCTCTCGACTCCATTTA
ATTGTTTCTTGCTCTAACTTCTCTAGGGGAACAACAGTGTTCACAAGTCC
CATTTTCTCTGCCTCCTCAGCAGTGTAAAACCTTGCTAAAAACCACATTT
CACGTGCTTTTTTAGGCCCCACCAAACGTGACATGATGGAGCTTCCATAA
CCTGCATCAAAGCTTCCAACCTTAGGACCAGTTTGGCCAAAAATTGCGTT
ATCTGCTGCAATAGTAAAATCACAAAC
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