CX047400

Overview
NameCX047400
Unique NameCX047400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: DRE2D_ARATH (Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana GN=DREB2D PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.119e-42
Identity = 105/222 (47.30%), Postives = 127/222 (57.21%), Query Frame = 2
Query:   41 KALMGGIGEKKQLKKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPELPSAQSHHLPASSANCTQHVAQRRNQPQMIHNSGITCXXXXXXXXXXXXDATQVYNFNYNNSAMSFPDNGSFGSHGKLAENEVKFSLNEQETDGFWENLNVNSPVFDE-SIWAEAAMSVDYPVMGE 703
            K +M G  +K+   +  QASSRKGCMRGKGGP+NA CTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS EAA+AYD+AARKLYGP+A LNLPE  S +S+   ASS           +Q     N+G                                    S  S    + NE+  S      +  WE++NV+ PV D+ SIW EA MS+ +P + E
Sbjct:    7 KVMMVGANKKQ---RTVQASSRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLPE--SLRSYPKTASSP---------ASQTTPSSNTG---------------------------------GKSSSDSESPCSSNEMS-SCGRVTEEISWEHINVDLPVMDDSSIWEEATMSLGFPWVHE 180          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: DRE2C_ARATH (Dehydration-responsive element-binding protein 2C OS=Arabidopsis thaliana GN=DREB2C PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 5.895e-33
Identity = 62/95 (65.26%), Postives = 76/95 (80.00%), Query Frame = 2
Query:   62 GEKKQLKKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPELPSAQS 346
            G  K ++KP    SRKGCM+GKGGPEN +C Y+GVRQR WGKWVAEIREP+ GARLWLGTF +S+EAA+AYD AA+ +YG  A+LNLPE+ +  S
Sbjct:   41 GGPKSIRKPPPKGSRKGCMKGKGGPENGICDYRGVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALAYDEAAKAIYGQSARLNLPEITNRSS 135          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: DRE2G_ARATH (Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana GN=DREB2G PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.699e-33
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = 2
Query:   65 EKKQLKKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNL 322
            E+   KK     SRKGCM+GKGGPENA CT++GVRQRTWGKWVAEIREPNRG RLWLGTF+TS EAA+AYD AA+KLYG +AKLNL
Sbjct:    4 EQPPAKKRNMGRSRKGCMKGKGGPENATCTFRGVRQRTWGKWVAEIREPNRGTRLWLGTFNTSVEAAMAYDEAAKKLYGHEAKLNL 89          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: DRE2H_ARATH (Putative dehydration-responsive element-binding protein 2H OS=Arabidopsis thaliana GN=DREB2H PE=5 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 1.313e-32
Identity = 63/98 (64.29%), Postives = 76/98 (77.55%), Query Frame = 2
Query:   62 GEKKQLKKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPELPSAQSHHL 355
            G  K ++K     SRKGCM+GKGGPEN +C Y GVRQRTWGKWVAEIREP RGA+LWLGTF +S+EAA+AYD A++ +YG  A+LNLP LP  Q+  L
Sbjct:   36 GGSKPIRKAPPKRSRKGCMKGKGGPENGICDYTGVRQRTWGKWVAEIREPGRGAKLWLGTFSSSYEAALAYDEASKAIYGQSARLNLPLLPLCQARLL 133          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: DRE2A_ARATH (Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana GN=DREB2A PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.412e-31
Identity = 62/103 (60.19%), Postives = 79/103 (76.70%), Query Frame = 2
Query:   71 KQLKKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPELPSAQSHHLPASSANCT 379
            K+ K PA+ S +KGCM+GKGGPEN+ C+++GVRQR WGKWVAEIREPNRG+RLWLGTF T+ EAA AYD AA+ +YGP A+LN P   +++     + S  CT
Sbjct:   52 KKRKVPAKGS-KKGCMKGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMYGPLARLNFPRSDASEVTSTSSQSEVCT 153          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: DRE2A_ORYSJ (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. japonica GN=DREB2A PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.809e-29
Identity = 59/88 (67.05%), Postives = 69/88 (78.41%), Query Frame = 2
Query:   65 EKKQLKKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPE 328
            E    K PA+ S +KGCM GKGGPEN+ C Y+GVRQRTWGKWVAEIREPNRG RLWLG+F T+ EAA AYD AAR +YGP A++N  +
Sbjct:   47 ENSSRKAPAKGS-KKGCMAGKGGPENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTARVNFAD 133          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: DRE2A_ORYSI (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. indica GN=DREB2A PE=3 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 8.809e-29
Identity = 59/88 (67.05%), Postives = 69/88 (78.41%), Query Frame = 2
Query:   65 EKKQLKKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPE 328
            E    K PA+ S +KGCM GKGGPEN+ C Y+GVRQRTWGKWVAEIREPNRG RLWLG+F T+ EAA AYD AAR +YGP A++N  +
Sbjct:   47 ENSSRKAPAKGS-KKGCMAGKGGPENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTARVNFAD 133          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: DRE2B_ARATH (Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DREB2B PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.710e-28
Identity = 59/106 (55.66%), Postives = 76/106 (71.70%), Query Frame = 2
Query:   62 GEKKQLKKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPELPSAQSHHLPASSANCT 379
            GEK + K PA+ S +KGCM+GKGGP+N+ C+++GVRQR WGKWVAEIREP  G RLWLGTF T+ +AA AYD AA  +YG  A+LN P+   ++     + S  CT
Sbjct:   48 GEKPKRKVPAKGS-KKGCMKGKGGPDNSHCSFRGVRQRIWGKWVAEIREPKIGTRLWLGTFPTAEKAASAYDEAATAMYGSLARLNFPQSVGSEFTSTSSQSEVCT 152          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: DRE2F_ARATH (Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana GN=DREB2F PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.272e-27
Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 2
Query:   80 KKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPEL 331
            K  +    +KG  RGKGGP+NALC Y+GVRQRTWGKWVAEIREP + ARLWLG+F T+ EAA+AYD AA KLYG DA LNLP L
Sbjct:    3 KSSSMKQWKKGPARGKGGPQNALCQYRGVRQRTWGKWVAEIREPKKRARLWLGSFATAEEAAMAYDEAALKLYGHDAYLNLPHL 86          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: DRE2E_ARATH (Dehydration-responsive element-binding protein 2E OS=Arabidopsis thaliana GN=DREB2E PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.116e-26
Identity = 55/84 (65.48%), Postives = 64/84 (76.19%), Query Frame = 2
Query:  101 SRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREP--------NRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPE 328
            S+KGCMRGKGGPEN +C ++GVRQR WGKWVAEIREP        +R  RLWLGTF T+ EAA+AYD AA  +YGP A+LN PE
Sbjct:   52 SKKGCMRGKGGPENPVCRFRGVRQRVWGKWVAEIREPVSHRGANSSRSKRLWLGTFATAAEAALAYDRAASVMYGPYARLNFPE 135          
The following BLAST results are available for this feature:
BLAST of CX047400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
DRE2D_ARATH3.119e-4247.30Dehydration-responsive element-binding protein 2D ... [more]
DRE2C_ARATH5.895e-3365.26Dehydration-responsive element-binding protein 2C ... [more]
DRE2G_ARATH7.699e-3375.58Dehydration-responsive element-binding protein 2G ... [more]
DRE2H_ARATH1.313e-3264.29Putative dehydration-responsive element-binding pr... [more]
DRE2A_ARATH9.412e-3160.19Dehydration-responsive element-binding protein 2A ... [more]
DRE2A_ORYSJ8.809e-2967.05Dehydration-responsive element-binding protein 2A ... [more]
DRE2A_ORYSI8.809e-2967.05Dehydration-responsive element-binding protein 2A ... [more]
DRE2B_ARATH5.710e-2855.66Dehydration-responsive element-binding protein 2B ... [more]
DRE2F_ARATH1.272e-2769.05Dehydration-responsive element-binding protein 2F ... [more]
DRE2E_ARATH9.116e-2665.48Dehydration-responsive element-binding protein 2E ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13H12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13H12-O24-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047400 ID=CX047400; Name=CX047400; organism=Citrus sinensis; type=EST; length=812bp
AAACGATCTTGTTTTCAGAGTCCTGTCTTAGGGAATGTCAAAAGCACTTA
TGGGTGGTATTGGAGAGAAAAAGCAGCTTAAGAAGCCTGCACAGGCTAGC
TCAAGGAAAGGTTGCATGAGAGGCAAAGGAGGCCCTGAGAATGCTCTTTG
TACTTACAAAGGTGTTCGACAGAGAACTTGGGGCAAATGGGTGGCCGAAA
TCCGTGAACCGAATCGCGGTGCACGTCTCTGGCTTGGGACATTTGACACT
TCCCATGAAGCCGCCGTGGCTTATGATGCTGCTGCTCGTAAACTTTACGG
CCCAGATGCCAAACTCAATTTGCCAGAGCTTCCATCAGCTCAATCTCATC
ACTTGCCAGCTTCTTCAGCCAATTGTACCCAGCATGTTGCTCAAAGGCGA
AATCAACCGCAAATGATCCACAATTCAGGTATCACTTGTTCATCAAACAG
CCCGCTTCCCAGGAGTAGTAATAATGATGCAACACAAGTTTACAATTTCA
ATTACAACAACTCAGCCATGTCTTTTCCTGATAATGGGAGCTTTGGGTCT
CATGGGAAGTTGGCTGAAAATGAAGTCAAATTCAGTCTGAATGAACAGGA
GACGGATGGATTTTGGGAGAATTTGAACGTGAATTCGCCTGTATTTGATG
AATCAATATGGGCAGAAGCAGCAATGTCCGTTGATTATCCAGTTATGGGC
GAACAAGGACTTCTTAATGGCAACTTTGTTGATGCAAGTGGCTGTGGGTG
GGATATGTTGCCGACTCCGTGGTGCGTTTGAGTATCTGACTTGGTGATTG
TCCATTCCAAGT
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