CX047383

Overview
NameCX047383
Unique NameCX047383
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3817 contig Csv1_Contig3817:23..937. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX047383 vs. ExPASy Swiss-Prot
Match: LEGB_GOSHI (Legumin B OS=Gossypium hirsutum GN=LEGB PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 7.054e-65
Identity = 119/182 (65.38%), Postives = 147/182 (80.77%), Query Frame = -3
Query:  212 NGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 757
            NG EET C+M+L+H     S ADV+NPR GR+TTVN FNLPIL+ LQLSAE+G LY NA+ AP WN+NAHSIVY+TRGNGR+QIV+ENGE +FD Q+  GQ+I VPQ  AVVK+AG RG EWI+FKTN  A  SQ+AGR S++RGLP+DV+ NSF +SR+EA RLK+NRQE++VF+P   SQ
Sbjct:  335 NGLEETFCSMRLKHRTPASS-ADVFNPRGGRITTVNSFNLPILQYLQLSAERGVLYNNAIYAPHWNMNAHSIVYITRGNGRIQIVSENGEAIFDEQVERGQVITVPQNHAVVKKAGRRGFEWIAFKTNANAKISQIAGRVSIMRGLPVDVLANSFGISREEAMRLKHNRQEVSVFSPRQGSQ 515          
BLAST of CX047383 vs. ExPASy Swiss-Prot
Match: 11SB_CUCMA (11S globulin subunit beta OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 7.300e-62
Identity = 111/212 (52.36%), Postives = 157/212 (74.06%), Query Frame = -3
Query:  212 VEEELRVLSPQRDRXXXXXXXXETPSYERDNGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 847
            V+E+  VL P++D              E +NG EETICT++L+ NI +   ADV+NPR GR++T N   LPILR ++LSAE+G LY NA++AP + +N+HS++Y TRGN R+Q+V   G++VFDG++REGQ++++PQ F V+KRA +RG EWI+FKTND A+T+ LAGR S +R LPL V+ N +++SR+EAQRLKY +QE+ V +PG RSQ
Sbjct:  266 VDEDFEVLLPEKDEEERSRGRYIESESESENGLEETICTLRLKQNIGRSVRADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVVIKRASDRGFEWIAFKTNDNAITNLLAGRVSQMRMLPLGVLSNMYRISREEAQRLKYGQQEMRVLSPG-RSQ 476          
BLAST of CX047383 vs. ExPASy Swiss-Prot
Match: 13S1_FAGES (13S globulin seed storage protein 1 OS=Fagopyrum esculentum GN=FA02 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.509e-56
Identity = 100/179 (55.87%), Postives = 134/179 (74.86%), Query Frame = -3
Query:  227 RDNGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 763
            R NG E+  C +K + N+++PS ADV+NPRAGR+ TVN  NLPIL  +QLSA+   LY NA+L P+WNLNAHS +YVTRG GR+Q+V + G +VFD  ++ GQ++VVPQGFAVV +AG  GLEW+  K +D A+TS +AG+ SVLR +P++V+ NS+ +S  EA RLK  RQE+ VF P
Sbjct:  375 RSNGLEQAFCNLKFKQNVNRPSRADVFNPRAGRINTVNSNNLPILEFIQLSAQHVVLYKNAILGPRWNLNAHSALYVTRGEGRVQVVGDEGRSVFDDNVQRGQILVVPQGFAVVLKAGREGLEWVELKNDDNAITSPIAGKTSVLRAIPVEVLANSYDISTKEAFRLKNGRQEVEVFLP 553          
BLAST of CX047383 vs. ExPASy Swiss-Prot
Match: 13S3_FAGES (13S globulin seed storage protein 3 OS=Fagopyrum esculentum GN=FAGAG1 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.986e-56
Identity = 100/179 (55.87%), Postives = 134/179 (74.86%), Query Frame = -3
Query:  227 RDNGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 763
            R NG E+  C +K R N+++PS ADV+NPRAGR+ TV+  NLPIL  +QLSA+   LY NA+L P+WNLNAHS +YVTRG GR+Q+V + G +VFD  ++ GQ++VVPQGFAVV +AG  GLEW+  K +D A+TS +AG+ SVLR +P++V+ NS+ +S  EA RLK  RQE+ VF P
Sbjct:  345 RSNGLEQAFCNLKFRQNVNRPSRADVFNPRAGRINTVDSNNLPILEFIQLSAQHVVLYKNAILGPRWNLNAHSALYVTRGEGRVQVVGDEGRSVFDDNVQRGQILVVPQGFAVVLKAGREGLEWVELKNDDNAITSPIAGKTSVLRAIPVEVLANSYDISTKEAFRLKNGRQEVEVFRP 523          
BLAST of CX047383 vs. ExPASy Swiss-Prot
Match: 13SB_FAGES (13S globulin basic chain OS=Fagopyrum esculentum PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.818e-56
Identity = 97/170 (57.06%), Postives = 130/170 (76.47%), Query Frame = -3
Query:  245 GFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQE 754
            G +E +CTMKLR NI  P  AD YNP+AGR+TT N   LP LR LQ+SAE+G LY N + AP WN+NAHS +YVTRGN ++Q+V + G  VFD ++++GQLI+VPQ FAV+K+AGN+G E+++FKTND AM + L GR S  R +P +V+++SFQ+S +EA+ LKY RQE
Sbjct:    1 GIDENVCTMKLRENIKSPQEADFYNPKAGRITTANSQKLPALRSLQMSAERGFLYSNGIYAPHWNINAHSALYVTRGNAKVQVVGDEGNKVFDDEVKQGQLIIVPQYFAVIKKAGNQGFEYVAFKTNDNAMINPLVGRLSAFRAIPEEVLRSSFQISSEEAEELKYGRQE 170          
BLAST of CX047383 vs. ExPASy Swiss-Prot
Match: GLUA2_ORYSJ (Glutelin type-A 2 OS=Oryza sativa subsp. japonica GN=GLUA2 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.880e-55
Identity = 100/178 (56.18%), Postives = 136/178 (76.40%), Query Frame = -3
Query:  227 NGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 757
            NG +ET CTM++R NID P+ AD YNPRAGRVT +N  N PIL  +Q+SA K NLY NALL+P WN+NAHSIVY+T+G  ++Q+V  NG+ VF+G++R GQL++VPQ + VVK+A   G  +I+FKTN  +M S +AG++S+ R LP DV+ N++++SR+EAQRLK+NR  E   FTP
Sbjct:  306 NGLDETFCTMRVRQNIDNPNRADTYNPRAGRVTNLNSQNFPILNLVQMSAVKVNLYQNALLSPFWNINAHSIVYITQGRAQVQVVNNNGKTVFNGELRRGQLLIVPQHYVVVKKAQREGCAYIAFKTNPNSMVSHIAGKSSIFRALPTDVLANAYRISREEAQRLKHNRGDEFGAFTP 483          
BLAST of CX047383 vs. ExPASy Swiss-Prot
Match: GLUA1_ORYSJ (Glutelin type-A 1 OS=Oryza sativa subsp. japonica GN=GLUA1 PE=1 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 3.880e-55
Identity = 99/178 (55.62%), Postives = 137/178 (76.97%), Query Frame = -3
Query:  227 NGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 757
            NG +ET CT+++R NID P+ AD YNPRAGRVT +N  N PIL  +Q+SA K NLY NALL+P WN+NAHS+VY+T+G  R+Q+V  NG+ VF+G++R GQL+++PQ +AVVK+A   G  +I+FKTN  +M S +AG++S+ R LP DV+ N++++SR+EAQRLK+NR  E   FTP
Sbjct:  306 NGLDETFCTLRVRQNIDNPNRADTYNPRAGRVTNLNTQNFPILSLVQMSAVKVNLYQNALLSPFWNINAHSVVYITQGRARVQVVNNNGKTVFNGELRRGQLLIIPQHYAVVKKAQREGCAYIAFKTNPNSMVSHIAGKSSIFRALPNDVLANAYRISREEAQRLKHNRGDEFGAFTP 483          
BLAST of CX047383 vs. ExPASy Swiss-Prot
Match: LEGA_GOSHI (Legumin A OS=Gossypium hirsutum GN=LEGA PE=2 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.926e-54
Identity = 105/235 (44.68%), Postives = 151/235 (64.26%), Query Frame = -3
Query:  227 NVNPDLXXXXXXXXXXXXXXXRVEEELRVLSP------QRDRXXXXXXXXETPSYERDNGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTP 913
            NV+ D+               RV + L+V++P      +R+          T    +DNG EET C+M+++ N+  P  AD++NP+AGR++T+NRFNLPIL+ L+LSAE+G LY  A L PQWN+NAH I+Y+ RG  R+Q+V  NG+ VFD  + +GQL+ VPQ FA +K+AGN G EWISF TN  A  + +AG  S +R LP +V+  S+QVSR++A+R+K+N +    FTP
Sbjct:  266 NVDHDIIRKIQRVRGNRGTIIRVRDRLQVVTPPRMEEEEREERQQEQRYRHTRGGSQDNGLEETFCSMRIKENLADPERADIFNPQAGRISTLNRFNLPILQRLELSAERGVLYNRAGLIPQWNVNAHKILYMLRGCARVQVVNHNGDAVFDDNVEQGQLLTVPQNFAFMKQAGNEGAEWISFFTNSEATNTPMAGSVSFMRALPEEVVAASYQVSREDARRIKFNNKNTFFFTP 500          
BLAST of CX047383 vs. ExPASy Swiss-Prot
Match: GLUA3_ORYSJ (Glutelin type-A 3 OS=Oryza sativa subsp. japonica GN=GLUA3 PE=2 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 3.631e-53
Identity = 97/178 (54.49%), Postives = 134/178 (75.28%), Query Frame = -3
Query:  227 NGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 757
            NG +ET CTM++R NID P+ AD YNPRAGR+T +N    PIL  +Q+SA K NLY NALL+P WN+NAHS+VY+T+G  R+Q+V  NG+ VFDG++R GQL+++PQ   V+K+A   G  +I+ KTN  +M S +AG+ S+ R LP DV+ N++++SR+EA+RLK+NR  EL VFTP
Sbjct:  305 NGLDETFCTMRVRQNIDNPNLADTYNPRAGRITYLNGQKFPILNLVQMSAVKVNLYQNALLSPFWNINAHSVVYITQGRARVQVVNNNGKTVFDGELRRGQLLIIPQHHVVIKKAQREGCSYIALKTNPDSMVSHMAGKNSIFRALPDDVVANAYRISREEARRLKHNRGDELGVFTP 482          
BLAST of CX047383 vs. ExPASy Swiss-Prot
Match: CRU1_RAPSA (Cruciferin PGCRURSE5 OS=Raphanus sativus GN=CRURS PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.380e-52
Identity = 97/180 (53.89%), Postives = 134/180 (74.44%), Query Frame = -3
Query:  236 PSYERDNGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV 775
            P   +DNG EETIC+M+   NID P+ ADVY P  GRVT+VN + LPIL+ ++LSA +G L  NA++ P++N+NA+ I+Y T+G  R+Q+V +NG+NV D Q+++GQL+V+PQGFA V ++     EWISFKTN  AM S LAGR S LR LPL+VI N+FQ+S +EA+R+K+N  E T+
Sbjct:  283 PQSPQDNGLEETICSMRTHENIDDPARADVYKPNLGRVTSVNSYTLPILQYIRLSATRGILQGNAMVLPKYNMNANEILYCTQGQARIQVVNDNGQNVLDQQVQKGQLVVIPQGFAYVVQSHGNNFEWISFKTNANAMVSTLAGRTSALRALPLEVITNAFQISLEEARRIKFNTPETTL 462          
The following BLAST results are available for this feature:
BLAST of CX047383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
LEGB_GOSHI7.054e-6565.38Legumin B OS=Gossypium hirsutum GN=LEGB PE=2 SV=1[more]
11SB_CUCMA7.300e-6252.3611S globulin subunit beta OS=Cucurbita maxima PE=1... [more]
13S1_FAGES3.509e-5655.8713S globulin seed storage protein 1 OS=Fagopyrum e... [more]
13S3_FAGES5.986e-5655.8713S globulin seed storage protein 3 OS=Fagopyrum e... [more]
13SB_FAGES7.818e-5657.0613S globulin basic chain OS=Fagopyrum esculentum P... [more]
GLUA2_ORYSJ3.880e-5556.18Glutelin type-A 2 OS=Oryza sativa subsp. japonica ... [more]
GLUA1_ORYSJ3.880e-5555.62Glutelin type-A 1 OS=Oryza sativa subsp. japonica ... [more]
LEGA_GOSHI1.926e-5444.68Legumin A OS=Gossypium hirsutum GN=LEGA PE=2 SV=2[more]
GLUA3_ORYSJ3.631e-5354.49Glutelin type-A 3 OS=Oryza sativa subsp. japonica ... [more]
CRU1_RAPSA1.380e-5253.89Cruciferin PGCRURSE5 OS=Raphanus sativus GN=CRURS ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13G11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13G11-M22-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047383 ID=CX047383; Name=CX047383; organism=Citrus sinensis; type=EST; length=915bp
TTTTTTTTTTTGAACAAAGAAATATTACTTTTTATTTTACTCGCACATTA
AACTTACATACAGTCCCGCAGCATTCATGTCGTTCATGCCCATTAAGGCT
TTTATTCATACATAGTCGTCCCTACCTCAACTACTTACACTACACTACAT
AGCTTACTTCCTGATTACGTACCCATTTACATAATTTCTCTTAGGCTACG
GTTAAGCCCCACTGTGACCTAGGCCCTGGAGTAAACACAGTCAGCTCCTG
CCTGTTGTACTTCAACCTCTGAGCTTCATCCCTCGACACTTGGAACGAGT
TCTGGATAACGTCCAACGGAAGTCCTCTTAACACCGAAGCCCTTCCGGCC
AGCTGGCTTGTCATGGCGACGTCGTTTGTCTTGAATGATATCCACTCCAG
TCCACGGTTACCTGCCCTCTTCACCACGGCGAAGCCCTGCGGAACAACGA
TCAGCTGACCCTCCCGGATTTGACCGTCGAACACATTCTCCCCGTTCTCC
GCTACAATTTGCATCCTGCCGTTGCCCCTTGTTACGTAGACTATGCTGTG
GGCATTCAAGTTCCACTGTGGCGCCAACAGGGCATTCGGGTAAAGGTTTC
CTTTCTCAGCACTAAGCTGGAGGTCTCGAAGGATAGGAAGGTTGAATCTG
TTCACGGTGGTGACACGTCCGGCCCGGGGGTTGTAGACGTCAGCATGTGA
TGGTTTATCGATGTTGTGCCTTAGTTTCATTGTACAGATAGTTTCCTCGA
AGCCATTGTCCCTTTCATATGACGGAGTTTCTTCGCATTCTTCCTGTTCT
TGTTCTCTGTCTCTTTGAGGAGACAGTACTCTCAGCTCTTCCTCGACTCT
GATGATAATGCCCCTCTGTATCTGTGGCCTCTGCAGTCTCCTGATTAGAT
CTGGGTTCACGTTGA
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