CX047376

Overview
NameCX047376
Unique NameCX047376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3849 contig Csv1_Contig3849:1..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 370.548 bits (950), Expect = 6.448e-102
Identity = 170/258 (65.89%), Postives = 212/258 (82.17%), Query Frame = 3
Query:   90 VSSHNRAYAPPSVARLTDLFGHVSVDQGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPSKPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSN---SASAPASCSKGSASSLDPVDGQTFTT 854
            VSSH+R +  P+V RLTD F  ++++ GFS  FG  N++   NGS+A L LDKSSG+GLVS+NKY++GFFSA +KLP+G +SGVV+AFYLSNA++YP +HDEIDIELLG  +R+DW +QTN+YANG   TGREEKFYFWFDPT   H Y++IWNSHH VFLVDN+PVR+FPN GAF+S YPSKPMS+YVT+WDGS+WAT GGKYPVNYKYAPFVVS+A++E++GC ++N   + S P + S GS SSLDPVDGQ F T
Sbjct:   19 VSSHSRKFTTPNVTRLTDQFSKIAIENGFSRRFGAHNIQV--NGSLAKLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYPSKPMSLYVTVWDGSEWATKGGKYPVNYKYAPFVVSVADVELSGCSVNNGSSTGSGPCTKSGGSISSLDPVDGQDFAT 274          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 1.404e-64
Identity = 110/222 (49.55%), Postives = 149/222 (67.12%), Query Frame = 3
Query:  159 SVDQGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPSKPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNSASAPASCSKGSASSL 824
            S ++ ++  FG  N+    +G    L LD+ +GSG VS + Y HGFFSA+IKLPS  ++GVV+AFY+SN D Y  NHDEID E LG+ +  +W +QTNIY NG   +GREE++  WFDPT   H YSI+W+  HI+F VDNVP+RE   T      +PSKPMS+Y TIWDGS+WAT+GGKY VNYKYAP++   +++ + GC +      P  C +G+A  +
Sbjct:   30 SFEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFPSKPMSLYTTIWDGSKWATNGGKYGVNYKYAPYIARFSDLVLHGCPVDPIEQFP-RCDEGAAEDM 250          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.103e-64
Identity = 111/223 (49.78%), Postives = 148/223 (66.37%), Query Frame = 3
Query:  156 VSVDQGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPSKPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNSASAPASCSKGSASSL 824
            +  D+G++  FG  N+    +G    L LD+ +GSG VS + Y HGFFS++IKLP+  S+GVV+AFYLSN D Y  NHDEID E LG+ +  +W +QTNIY NG    GREE++  WFDPT   H YSI+W+  HI+F VDNVP+RE   T +    +P+KPMS+Y TIWDGS+WAT GGKY VNYKYAP+V    ++ + GC +  +   P SC   +  +L
Sbjct:   29 IQFDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPAKPMSLYSTIWDGSKWATDGGKYGVNYKYAPYVSQFTDLILHGCAVDPTEKFP-SCKDEAVQNL 250          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 6.751e-59
Identity = 104/233 (44.64%), Postives = 144/233 (61.80%), Query Frame = 3
Query:  156 VSVDQGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPSKPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNSASAPASCSKGSASSLDPVDGQTFTT 854
            +S ++  S  FG +N+ R  +     L LD+ +GSG +S N Y HGF+S+ IKLP+  ++GVV+AFY SN D +   HDE+DIE LG+ K   W  QTN+Y NG    GREE++  WFDP+ + H YSI+W  H I+F VD+VP+RE     A  + YP+KPM++Y TIWD S WAT GGKY  NYK+APFV       + GC +      P  CS     S+D ++ Q +++
Sbjct:   30 LSFEESLSPLFGDANLVRSPDDLSVRLLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPAKPMALYATIWDASDWATSGGKYKANYKFAPFVAEFKSFSLDGCSVDPIQEVPMDCS----DSVDFLESQDYSS 258          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.935e-54
Identity = 96/205 (46.83%), Postives = 133/205 (64.88%), Query Frame = 3
Query:  165 DQGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPSKPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNS 779
            D+G S  FG  N+ R  +     L LDK +GSG +S + Y HGFFS+ IKLP   ++G+V+AFY SN D +  +HDE+DIE LG+ +   W  QTN+Y NG  + GREE++  WFDP+ + H YSI+W    I+F VD+VP+RE       +  YP KPMS+Y TIWD S WAT GGK+ V+Y ++PFV    ++ + GC +S+S
Sbjct:   41 DEGLSHLFGEGNLIRSPDDRSVRLLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYPQKPMSLYATIWDASSWATSGGKFGVDYTFSPFVSEFKDIALDGCNVSDS 245          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.118e-45
Identity = 97/237 (40.93%), Postives = 135/237 (56.96%), Query Frame = 3
Query:  108 AYAPPSVARL-TDLFGHVSVDQGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANG---GVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPSKPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNSASA-PASCS 803
            AY PPS     +   G ++  +GF   +G  + +   N    T+ LD++SGSG  S   +  G+F A IKL  G ++GV+ + YLSN +++P  HDE+DIE LG      + LQTN+Y  G   G   GRE KF  WFDPT   H+Y+I+W+   I+FLVD++P+R +P   A  S +P +PM +Y +IWD S WAT  GKY  +YKY PF       +  GC   +SA   P S S
Sbjct:   24 AYWPPSPGYWPSSKVGSLNFYKGFRNLWGPQHQRMDQNA--LTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIRRYPKKSA--STFPLRPMWLYGSIWDASSWATEDGKYKADYKYQPFTAKYTNFKALGCTAYSSARCYPLSAS 256          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.460e-45
Identity = 98/236 (41.53%), Postives = 134/236 (56.78%), Query Frame = 3
Query:  156 VSVDQGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPSKPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNSASAPASC----SKGSASSLDPVDGQTFT 851
            V  D  +   +G +NV ++N G    L+LD SSGSG  S+N Y  GFF   IK+P   +SGVV AFYL+   S  + HDE+D E LG+ K     +QTN++ NG     RE+K   WFDP+   H Y+I+WN + IV  VDN+PVR F NT +    YPSKPM V V++W+G  WAT GGK  +N+  APF  +      +GC  +   +A  S     + GS S L   + + +T
Sbjct:   37 VGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLT---SKGNTHDEVDFEFLGN-KEGKLAVQTNVFTNG--KGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYPSKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGCFTNAEKNACGSSAYWWNTGSYSKLSDSEQKAYT 266          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 3.253e-45
Identity = 89/210 (42.38%), Postives = 127/210 (60.48%), Query Frame = 3
Query:  165 DQGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVS---TGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPSKPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNSAS 785
            D+ F T +G  + +R  +  + TL LDKS+GSG  S   Y  G+F A+IKL  G ++GV  + YLSN   +P +HDE+DIE LG      + LQTN++  G       GRE KF  WFDPT   H+Y+I+WN + IVF VD+VP+R +       +++P++PM VY +IWD S WAT  G+   +Y+Y PFV      ++AGC   +S+S
Sbjct:   40 DREFRTLWGSQHQRREQD--VVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYNRKN--EAIFPTRPMWVYGSIWDASDWATENGRIKADYRYQPFVAKYKNFKLAGCTADSSSS 245          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.246e-45
Identity = 85/219 (38.81%), Postives = 129/219 (58.90%), Query Frame = 3
Query:  156 VSVDQGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPSKPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNSASAPASCSKGS 812
            V+  Q +   +G S+V  +++G    L +D+SSG G  S++ Y  G F   IK+PSG + G+V AFYL++       HDEID E LG++      LQTN++ NG     REE+F  WF+PT  +H Y ++WN + IVF VDN+P+R + N    S  YPSKPM V  ++W+G  WAT GG+  VN+ Y+PF+    +  ++GC +   ++   +C   +
Sbjct:   33 VTFGQNYIVTWGQSHVSTLHSGEEVDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFYLTSKGG---GHDEIDFEFLGNNNGKPVTLQTNLFLNG--EGNREERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKNENGVS--YPSKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCNIDGRSNNVGACESSN 244          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.012e-44
Identity = 88/217 (40.55%), Postives = 123/217 (56.68%), Query Frame = 3
Query:  150 GHVSVDQGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPSKPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNSASAPASC 800
            G +  D  +   +G  ++ ++N G    L++D SSGSG  S++ Y  GFF   IKLP   S+GVV AFYL++       HDE+D E LG+ +     +QTN+++NG    GRE+KF  WFDPT   H Y I+WN + IVF VD VP+R F N       YPSKPM +  ++W+G  WAT GGK  +N+ YAPF          GC ++  ++    C
Sbjct:   28 GAIDFDVNYVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLTSKGD---THDEVDFEFLGNRQGKPIAIQTNVFSNG--QGGREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYPSKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQYQGFSDHGCHVNGQSNNANVC 239          
The following BLAST results are available for this feature:
BLAST of CX047376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH33_ARATH6.448e-10265.89Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH27_ARATH1.404e-6449.55Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH28_ARATH9.103e-6449.78Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH30_ARATH6.751e-5944.64Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH29_ARATH2.935e-5446.83Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH32_ARATH1.118e-4540.93Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_ARATH1.460e-4541.53Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH31_ARATH3.253e-4542.38Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH3_ARATH7.246e-4538.81Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH2_ARATH8.012e-4440.55Xyloglucan endotransglucosylase/hydrolase protein ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13G08_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13G08-M16-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047376 ID=CX047376; Name=CX047376; organism=Citrus sinensis; type=EST; length=856bp
CAAAATCAAGTGAAGCACAAATGGCTCTTTTACTACTAAACAATCTAATT
TTAGCATTCCTCTTGTTCTTTTGCATTATGGCACCCAAGGTTTCTTCACA
CAACAGGGCTTACGCGCCCCCAAGTGTTGCACGCTTGACAGATCTTTTTG
GTCACGTCTCAGTTGATCAGGGCTTTTCCACTTTCTTCGGAGGCTCAAAT
GTCAAGCGGATCAATAATGGGTCCATGGCCACTCTTGCTCTTGACAAATC
CTCAGGCTCTGGATTGGTCTCCAGGAACAAATATTACCACGGATTCTTCA
GTGCTGCTATAAAGTTGCCATCTGGTCTCTCATCCGGAGTTGTACTTGCC
TTCTACTTGTCTAATGCAGATAGCTATCCGCACAACCATGATGAAATTGA
TATTGAATTGCTTGGTCATGATAAGAGAAATGACTGGGTTCTACAAACAA
ACATATATGCGAATGGAGGTGTCAGTACCGGAAGAGAAGAGAAATTTTAC
TTCTGGTTCGATCCAACGGCACAGCACCATTACTACAGCATTATCTGGAA
CAGCCATCACATTGTATTTCTAGTGGACAATGTACCGGTGAGAGAGTTTC
CAAACACTGGGGCCTTTTCTTCTGTATACCCATCAAAGCCAATGTCAGTT
TATGTGACAATATGGGATGGATCACAGTGGGCAACTCATGGAGGAAAATA
TCCAGTTAATTACAAGTATGCACCATTTGTGGTTTCACTGGCTGAAATGG
AAATGGCTGGCTGTGTGTTATCAAATTCTGCCTCTGCTCCTGCTTCGTGC
TCGAAAGGAAGTGCTTCAAGCTTGGATCCAGTTGATGGACAAACATTTAC
TACACT
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