FC921967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921967 vs. ExPASy Swiss-Prot
Match: CTNS_ARATH (Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.282e-34 Identity = 68/98 (69.39%), Postives = 82/98 (83.67%), Query Frame = 2 Query: 2 GRDQMIPVAANDVAFSMHAVLLTIITLFQIAIYERGVPKVSKISMAIVSVVWLAAAVCFFVALPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 G +MIPVAANDVAFS+HAV++T +TLFQI IYERG KVS++++ IV VVW AA+CFF+ALP HSWLWLI+ FN+IQV MT +KYIPQA MNF RK Sbjct: 81 GDKEMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKVSRLAIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRK 178
BLAST of FC921967 vs. ExPASy Swiss-Prot
Match: CTNS_DICDI (Cystinosin homolog OS=Dictyostelium discoideum GN=ctns PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.749e-18 Identity = 39/94 (41.49%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 17 IPVAANDVAFSMHAVLLTIITLFQIAIYERGVPKVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 IPV +D+AF++H +LT IT+ Q IY+RG K SK+ + I +++W++ V + N +WLW+IN+++ +++ +T IKYIPQA +NF+ K Sbjct: 79 IPVQQSDIAFAIHGFVLTAITIIQCFIYDRGNQKNSKLGIGIATLIWVSLIVMTILGFSNVFTWLWVINYYSYVKLFITFIKYIPQAYLNFKNK 172
BLAST of FC921967 vs. ExPASy Swiss-Prot
Match: CTNS_MOUSE (Cystinosin OS=Mus musculus GN=Ctns PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.514e-14 Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 20 PVAANDVAFSMHAVLLTIITLFQIAIYERGVPKVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 PV +ND FS+HAV LT+I + Q +YERG +VS S+ + + WL V VA +WL + F+ I++I+TLIKY PQA MNF K Sbjct: 200 PVDSNDAFFSLHAVALTLIVILQCCLYERGNQRVSWPSIGFLVLAWLFVLVTMIVAAVGITTWLQFLFCFSYIKLIITLIKYFPQAYMNFYYK 292
BLAST of FC921967 vs. ExPASy Swiss-Prot
Match: CTNS_HUMAN (Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.289e-14 Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 20 PVAANDVAFSMHAVLLTIITLFQIAIYERGVPKVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 PV +NDV FS+HAV+LT+I + Q +YERG +VS ++ + + WL A V VA +WL + F+ I++ +TL+KY PQA MNF K Sbjct: 200 PVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYK 292
BLAST of FC921967 vs. ExPASy Swiss-Prot
Match: CTNS_BOVIN (Cystinosin OS=Bos taurus GN=CTNS PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.316e-14 Identity = 37/93 (39.78%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 20 PVAANDVAFSMHAVLLTIITLFQIAIYERGVPKVSKISMAIVSVVWLAAAVCFFV-ALPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 PV +NDV FS+HAV LT++ + Q +YERG +VS ++++ + + WL + + A+ +WL + F+ I++ +TL+KY PQA MNF K Sbjct: 200 PVDSNDVFFSLHAVALTLVVIVQCLLYERGSQRVSWLAISFLVLSWLFTLIALIMAAVGATTWLQFLFCFSYIKLAVTLVKYFPQAYMNFHYK 292
BLAST of FC921967 vs. ExPASy Swiss-Prot
Match: CTNS_DROME (Cystinosin homolog OS=Drosophila melanogaster GN=CG17119 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 6.848e-12 Identity = 37/95 (38.95%), Postives = 57/95 (60.00%), Query Frame = 2 Query: 20 PVAANDVAFSMHAVLLTIITLFQIAIYERGVPKVSKISMAIVSVVWLAAAVCFFVALPNHS---WLWLINFFNAIQVIMTLIKYIPQAIMNFRRK 295 PV NDV FS+HA+ T IT+ Q Y+R +VS I+ I+++ A V L S WL + + + +++ +T+IKY+PQA+MN+RRK Sbjct: 205 PVMLNDVVFSLHAMFATCITILQCFFYQRAQQRVSFIAYGILAI--FAVVVVVSAGLAGGSVIHWLDFLYYCSYVKLTITIIKYVPQALMNYRRK 297 The following BLAST results are available for this feature:
BLAST of FC921967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921967 ID=FC921967; Name=FC921967; organism=Citrus sinensis; type=EST; length=296bpback to top |