CX047358

Overview
NameCX047358
Unique NameCX047358
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10438 contig Csv1_Contig10438:794..1631. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX047358 vs. ExPASy Swiss-Prot
Match: HYUC_PSESN (Hydantoin utilization protein C OS=Pseudomonas sp. (strain NS671) GN=hyuC PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.368e-34
Identity = 81/213 (38.03%), Postives = 115/213 (53.99%), Query Frame = -2
Query:  199 HIEQGPILEEEGTSIGIVTAIAAPASIKVDFEGNGGHAGAVLMPNRNDXXXXXXXXXXAVEKHVLESGSIDTVGTVGILELHPGAINSIPSKSHLEIDTRDIDEKRRNSVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSEKSIIEAVEAASKELNLTHKFMISRAYHDSLFMARVSPMGMIFIPCFKGYSHKPDEYASGHDMENGVKVL 837
            HIEQGP LE+    IGIV+ IA P+  KV   G  GHAG V M  R D           VE   +   +  TVGTVG +   PG  N IP      +D RDI+ +RRN +IEKI +    ++  RG+     K +   P   SE ++I +++ + KEL +    ++S A HD++F+A ++ +GM+F+ C  G SH P E+A   D+  G KVL
Sbjct:  195 HIEQGPYLEKNNYPIGIVSGIAGPSWFKVRLVGEAGHAGTVPMSLRKDPLVGAAEVIKEVETLCMNDPNAPTVGTVGRIAAFPGGSNIIPESVEFTLDIRDIELERRNKIIEKIEEKIKLVSNTRGLEYQIEKNMAAVPVKCSE-NLINSLKQSCKELEIDAPIIVSGAGHDAMFLAEITEIGMVFVRCRNGISHSPKEWAEIDDILTGTKVL 406          
BLAST of CX047358 vs. ExPASy Swiss-Prot
Match: Y588_HAEIN (Uncharacterized hydrolase HI0588 OS=Haemophilus influenzae GN=HI0588 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.238e-33
Identity = 77/213 (36.15%), Postives = 120/213 (56.34%), Query Frame = -2
Query:  199 HIEQGPILEEEGTSIGIVTAIAAPASIKVDFEGNGGHAGAVLMPNRNDXXXXXXXXXXAVEKHVLESGSIDTVGTVGILELHPGAINSIPSKSHLEIDTRDIDEKRRNSVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSEKSIIEAVEAASKELNLTHKFMISRAYHDSLFMARVSPMGMIFIPCFKGYSHKPDEYASGHDMENGVKVL 837
            HIEQGP LE EG +IG+VT IAAP    V  +G   H+GA  M  R+D          A+E+  +++G   TV TVG +   PG +N +P    L +D R    + R+SV E + +    +++ RG+ L E +++++D P +  ++++  +   +  L  +++ M S A HD++ MA + P GMIFIP   G SH P E+    D+E G+KVL
Sbjct:  190 HIEQGPRLENEGKTIGVVTGIAAPIRAIVKIKGQADHSGATAMHYRHDALLGGSELSLAIERAAIQAGH-STVATVGNITAKPGVMNVVPGYCELLVDIRGTHVQARDSVFELLQEEISKVSEKRGL-LIELQLISKDNPIILPENMVNQIAETAHSLGYSYEIMPSGAGHDAMHMATLCPTGMIFIPSHLGISHNPLEFTDWKDIEAGIKVL 400          
BLAST of CX047358 vs. ExPASy Swiss-Prot
Match: AMAB2_BACST (N-carbamoyl-L-amino acid hydrolase OS=Bacillus stearothermophilus GN=amaB PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.838e-31
Identity = 82/217 (37.79%), Postives = 117/217 (53.92%), Query Frame = -2
Query:  187 HIEQGPILEEEGTSIGIVTAIAAPASIKVDFEGNGGHAGAVLMPNRNDXXXXXXXXXXAVEKHVLESGSIDTVGTVGILELHPGAINSIPSKSHLEIDTRDIDEKRRNSVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSEKSIIEAVEAASKELNLTHKFMISRAYHDSLFMARVSPMGMIFIPCFKGYSHKPDEYASGHDMENGVKVLALTL 837
            HIEQG +LEE G  +GIVT IA    +K   EG   HAGA  M  R D           +E+    +G+  TVGTVG L ++PG IN IP +    +D RD+  + R+ V + I   A TIAK R V ++  ++  + PP L    +  A EAA ++L     ++ S A HDS+ +A + P+GMIF+    G SH P E+++  D   G +VL  T+
Sbjct:  189 HIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARRTGT--TVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVTTERL-QEMPPVLCSDEVKRAAEAACQKLGYPSFWLPSGAAHDSVQLAPICPIGMIFVRSQDGVSHSPAEWSTKEDCAAGAEVLYHTV 402          
BLAST of CX047358 vs. ExPASy Swiss-Prot
Match: AMAB1_BACST (N-carbamoyl-L-amino acid hydrolase OS=Bacillus stearothermophilus GN=amaB PE=3 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 5.464e-29
Identity = 80/217 (36.87%), Postives = 115/217 (53.00%), Query Frame = -2
Query:  187 HIEQGPILEEEGTSIGIVTAIAAPASIKVDFEGNGGHAGAVLMPNRNDXXXXXXXXXXAVEKHVLESGSIDTVGTVGILELHPGAINSIPSKSHLEIDTRDIDEKRRNSVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSEKSIIEAVEAASKELNLTHKFMISRAYHDSLFMARVSPMGMIFIPCFKGYSHKPDEYASGHDMENGVKVLALTL 837
            HIEQG +LEE G  +GIVT IA    +K    G   HAGA  M  R D           +E+    +G+  TVGTVG L ++PG IN IP +    +D RD+  + R+ V + I   A TIAK R V L+  ++  +  P L  + + +A E A K+L     ++ S A HD + +A + P+GMIF+    G SH P E+++  D   G +VL  T+
Sbjct:  189 HIEQGRVLEEAGLPVGIVTGIAGLIWVKFTIAGPAEHAGATPMSLRRDPMAAAAQIIIVIEEEARRTGT--TVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRLTTERL-QEMAPVLCSEVVKQAAERACKQLGYPPFWLPSGAAHDGVQLAPICPIGMIFVRSQDGVSHSPAEWSTKEDCAVGAEVLYHTV 402          
BLAST of CX047358 vs. ExPASy Swiss-Prot
Match: ALLC_ECOLI (Allantoate amidohydrolase OS=Escherichia coli (strain K12) GN=allC PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.126e-19
Identity = 65/217 (29.95%), Postives = 92/217 (42.40%), Query Frame = -2
Query:  187 HIEQGPILEEEGTSIGIVTAIAAPASIKVDFEGNGGHAGAVLMPNRNDXXXXXXXXXXAVEKHVLESGSIDTVGTVGILELHPGAINSIPSKSHLEIDTRDIDEKRRNSVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSEKSIIEAVEAASKELNLTHKFMISRAYHDSLFMARVSPMGMIFIPCFKGYSHKPDEYASGHDMENGVKVLALTL 837
            HIEQG +LE  G SIG+V AI       V   G   HAG   M  R D             +     G    V T G +E  P  +N +P K+   ID R  D        +++      I     + +     ++++P  ++++ +    E   +E  L ++ M S A HD+   A   P  MIFIP   G SH P E  +  D+  GVK LAL L
Sbjct:  190 HIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGD-PLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCERE-KLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALML 404          
BLAST of CX047358 vs. ExPASy Swiss-Prot
Match: AAH_ARATH (Allantoate deiminase, chloroplastic OS=Arabidopsis thaliana GN=AAH PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.340e-18
Identity = 68/230 (29.57%), Postives = 105/230 (45.65%), Query Frame = -2
Query:  220 HIEQGPILEEEGTSIGIVTAIAAPASIKVDFEGNGGHAGAVLMPNRNDXXXXXXXXXXAVE-----------------KHVLESGSIDTVGTVGILELHPGAINSIPSKSHLEIDTRDIDEKRRNSVIEKIHQSAITIAKNRGVTLS-----EFKIVNQDPP-ALSEKSIIE-AVEAASKELNLTHKFMISRAYHDSLFMARVSPMGMIFIPCFKGYSHKPDEYASGHDM 837
            HIEQGP+LE  G  +G+V  IA    +KV  +G+ GHAG V M  R D           +E                 +  +ES +   V TVG +   P A N IP +    +D R ID+  R +++  +      I   R +  S     +   V  DP  +L  KS  + A++  + E+      ++S A HD++ MA ++ +GM+F+ C  G SH P E+    D+
Sbjct:  281 HIEQGPVLEWVGYPLGVVKGIAGQTRLKVTVKGSQGHAGTVPMSMRQDPMTGAAELIVLLESVCKNPKDYLSCNVQCNEDTVESLANSLVCTVGEISTWPSASNVIPGQVTFTVDLRTIDDVGRKAILHDLSTRMYQICDKRSLLCSIERKHDADAVMSDPQLSLQLKSAAQSALKKMTGEVQDEVPVLMSGAGHDAMAMAHLTKVGMLFVRCRGGISHSPAEHVLDDDV 510          
BLAST of CX047358 vs. ExPASy Swiss-Prot
Match: ALLC_BACSU (Allantoate amidohydrolase OS=Bacillus subtilis GN=pucF PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.267e-17
Identity = 68/220 (30.91%), Postives = 99/220 (45.00%), Query Frame = -2
Query:  199 HIEQGPILEEEGTSIGIVTAIAAPASIKVDFEGNGGHAGAVLMPNRNDXXXXXXXXXXAVEKHVLESGSI--DTVGTVGILELHPGAINSIPSKSHLEIDTRDIDEKRRNSVIEKIHQSAITIAKNRGVTLSE-FKIVNQDPPALSEKSIIEAVEAASKELNLTHKF----MISRAYHDSLFMARVSPMGMIFIPCFKGYSHKPDEYASGHDMENGVKVL 837
            HIEQG  LE  G  +GIVT+IA      V  EG   HAG   M  R D           + + +L S  +  +   T G +   P   N IP +    ID R     +   V+E+ HQ  + +    G+ L +  + V  +   +    + E ++AA+ E  L + F    M+S A HD+  + R  P  M+F+P   G SH P EY S   +E GV+ L
Sbjct:  193 HIEQGKTLEMSGRDLGIVTSIAGQRRYLVTLEGECNHAGTTSMKWRKDPLAASSRI---IHELLLRSDELPDELRLTCGKITAEPNVANVIPGRVQFSIDIRH----QHQHVLEQFHQDMVALIN--GICLQKGIRAVIDEYMRIEPVPMDERLKAAAFETALENGFSCEEMVSGAGHDAQMIGRRYPACMLFVPSRGGVSHSPKEYTSARQLEIGVRAL 403          
The following BLAST results are available for this feature:
BLAST of CX047358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
HYUC_PSESN7.368e-3438.03Hydantoin utilization protein C OS=Pseudomonas sp.... [more]
Y588_HAEIN6.238e-3336.15Uncharacterized hydrolase HI0588 OS=Haemophilus in... [more]
AMAB2_BACST5.838e-3137.79N-carbamoyl-L-amino acid hydrolase OS=Bacillus ste... [more]
AMAB1_BACST5.464e-2936.87N-carbamoyl-L-amino acid hydrolase OS=Bacillus ste... [more]
ALLC_ECOLI5.126e-1929.95Allantoate amidohydrolase OS=Escherichia coli (str... [more]
AAH_ARATH4.340e-1829.57Allantoate deiminase, chloroplastic OS=Arabidopsis... [more]
ALLC_BACSU6.267e-1730.91Allantoate amidohydrolase OS=Bacillus subtilis GN=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS09_13F10_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13F10-K20-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047358 ID=CX047358; Name=CX047358; organism=Citrus sinensis; type=EST; length=838bp
CTAAGTAACTCGTAAGTCATGGATCAATGTTGGAGCTCTATATCAAGTCA
TTTACTAAAAATAAGGATAAAGTAACTCCTGACTGCACAAAGGGTAACAG
AAAGGAGAATGTATAACCCTGTATGAAATCTTAAGTAGCTGGTTGACAAG
AATTACAAGCAGTGATCATTGCAGGGACAACTTGGCAAGGGTCAATGCTA
ATACCTTTACCCCATTTTCCATGTCATGGCCAGAGGCATATTCATCAGGC
TTGTGGCTATAACCTTTGAAACATGGAATGAATATCATGCCCATTGGCGA
TACCCTGGCCATAAAGAGTGAATCATGGTAAGCTCTGCTTATCATAAACT
TATGTGTTAAATTAAGTTCTTTTGACGCTGCTTCCACTGCCTCAATTATT
GATTTCTCAGAAAGAGCTGGTGGATCCTGATTTACGATTTTGAATTCAGA
TAGAGTGACCCCACGATTTTTAGCAATTGTAATTGCAGACTGATGGATTT
TTTCAATCACACTATTTCTTCGCTTTTCATCAATGTCTCGTGTGTCAATT
TCTAAGTGTGACTTGCTTGGTATGCTGTTGATTGCACCAGGATGCAGCTC
CAGAATACCGACTGTACCAACGGTATCAATGGATCCAGATTCTAGAACAT
GTTTCTCGACAGCTAGCGCTAGTTCTGCAGCAGCCAGACCGGCATCGTTC
CTATTCGGCATCAAGACAGCACCAGCATGCCCTCCATTGCCTTCAAAATC
TACTTTTATACTTGCAGGAGCTGCAATCGCAGTCACTATACCAATTGATG
TACCTTCCTCCTCCAGAATGGGTCCCTGCTCTATATGC
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