FC921966

Overview
NameFC921966
Unique NameFC921966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length356
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1954 contig Csv1_Contig1954:362..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 3.721e-34
Identity = 68/87 (78.16%), Postives = 74/87 (85.06%), Query Frame = 3
Query:   12 GHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            G +F DENFI KHTG GLLSMANSGPNSNGCQFFITC  CD+LD KHVVFGR++ DGLL +RKIENVATGPNNRPKL   I ECG+M
Sbjct:   93 GDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLV-DGLLTLRKIENVATGPNNRPKLPVKITECGQM 178          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIH_HUMAN (Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 3.721e-34
Identity = 65/90 (72.22%), Postives = 77/90 (85.56%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIY   F DENF  +H+ PGLLSMANSGP++NGCQFFITC+KCDWLD KHVVFG+++ DGLLV+RKIENV TGPNN+PKL   I++CGEM
Sbjct:   89 SIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKII-DGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIH_BOVIN (Peptidyl-prolyl cis-trans isomerase H OS=Bos taurus GN=PPIH PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 3.721e-34
Identity = 65/90 (72.22%), Postives = 77/90 (85.56%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIY   F DENF  +H+ PGLLSMANSGP++NGCQFFITC+KCDWLD KHVVFG+++ DGLLV+RKIENV TGPNN+PKL   I++CGEM
Sbjct:   89 SIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKII-DGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIH_CRYNE (Peptidyl-prolyl cis-trans isomerase H OS=Cryptococcus neoformans GN=CYP3 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.414e-33
Identity = 69/90 (76.67%), Postives = 75/90 (83.33%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG +F+DENF  KHTGPGLLSMANSGPN+NGCQFFIT A  ++LD KH VFGRV+ DGLL VRKIENV TG NNRPKL   IAECGEM
Sbjct:   91 SIYGAQFEDENFKVKHTGPGLLSMANSGPNTNGCQFFITTAPAEFLDGKHCVFGRVI-DGLLTVRKIENVPTGANNRPKLQVRIAECGEM 179          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: CYP11_CAEEL (Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorhabditis elegans GN=cyn-11 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.042e-32
Identity = 64/90 (71.11%), Postives = 75/90 (83.33%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG KF DENF  KH GPG+LSMAN+G ++NGCQFFITCAK D+LDNKHVVFGRVL DG+L VRKIENV TG NN+PKL   + +CG++
Sbjct:   95 SIYGSKFRDENFELKHIGPGMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFGRVL-DGMLTVRKIENVPTGANNKPKLPIVVVQCGQL 183          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 1.120e-30
Identity = 63/90 (70.00%), Postives = 71/90 (78.89%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG KFDDENF  KH   GLLSMANSGP +NGCQFFIT   C +LD KHVVFG+V+ DGLL +RK+ENV TG NNRPK+A  I +CGEM
Sbjct:   68 SIYGDKFDDENFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVV-DGLLTLRKMENVPTGANNRPKMAVRITQCGEM 156          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.373e-27
Identity = 60/89 (67.42%), Postives = 68/89 (76.40%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGE 269
            SIYG KFDDENFI KHTGPGLLSMANSGPN+NG QFF+TC K DWLD KHVVFG V  +GL V+R+IE      + +PK    IA+CGE
Sbjct:  213 SIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVT-EGLDVLRQIE-ARGSKDGKPKQKVIIADCGE 299          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 3.373e-27
Identity = 60/89 (67.42%), Postives = 68/89 (76.40%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGE 269
            SIYG KFDDENFI KHTGPGLLSMANSGPN+NG QFF+TC K DWLD KHVVFG V  +GL V+R+IE      + +PK    IA+CGE
Sbjct:  213 SIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVT-EGLDVLRQIE-AQGSKDGKPKQKVMIADCGE 299          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.373e-27
Identity = 60/89 (67.42%), Postives = 68/89 (76.40%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGE 269
            SIYG KFDDENFI KHTGPGLLSMANSGPN+NG QFF+TC K DWLD KHVVFG V  +GL V+R+IE      + +PK    IA+CGE
Sbjct:  213 SIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVT-EGLDVLRQIE-AQGSKDGKPKQKVIIADCGE 299          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.373e-27
Identity = 59/89 (66.29%), Postives = 68/89 (76.40%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGE 269
            SIYG KFDDENFI KHTGPGLLSMANSGPN+NG QFF+TC K DWLD KHVVFG +  DGL V+R+IE      + +PK    I++CGE
Sbjct:  213 SIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEIT-DGLDVLRQIE-AQGSKDGKPKQKVIISDCGE 299          
The following BLAST results are available for this feature:
BLAST of FC921966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
PPIH_RHIOR3.721e-3478.16Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
PPIH_HUMAN3.721e-3472.22Peptidyl-prolyl cis-trans isomerase H OS=Homo sapi... [more]
PPIH_BOVIN3.721e-3472.22Peptidyl-prolyl cis-trans isomerase H OS=Bos tauru... [more]
PPIH_CRYNE1.414e-3376.67Peptidyl-prolyl cis-trans isomerase H OS=Cryptococ... [more]
CYP11_CAEEL2.042e-3271.11Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorha... [more]
PPIH_USTMA1.120e-3070.00Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]
PPIE_PONAB3.373e-2767.42Peptidyl-prolyl cis-trans isomerase E OS=Pongo abe... [more]
PPIE_MOUSE3.373e-2767.42Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]
PPIE_HUMAN3.373e-2767.42Peptidyl-prolyl cis-trans isomerase E OS=Homo sapi... [more]
PPIE_BOVIN3.373e-2766.29Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionC06056A07T7 RindPdigS Citrus sinensis cDNA clone C06056A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921966 ID=FC921966; Name=FC921966; organism=Citrus sinensis; type=EST; length=356bp
CTTCAATTTATGGACATAAGTTTGATGATGAAAATTTTATTGCTAAACAC
ACTGGTCCAGGTCTATTATCTATGGCAAACAGCGGACCAAATTCTAATGG
GTGCCAGTTCTTTATCACTTGTGCAAAATGTGATTGGCTTGACAATAAGC
ACGTTGTATTTGGGAGGGTGCTCGGAGATGGTCTTTTGGTTGTCAGGAAG
ATCGAGAATGTGGCCACCGGACCCAACAACCGGCCTAAACTGGCATGCAC
TATCGCAGAATGTGGAGAAATGTGAAACTGATAACTTGAAAACAATTGTG
GCATTTCTAAGGACTAATAAAAAGAAAATATCTGTTAACAAGTAGAATTG
TATATT
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