CX047258

Overview
NameCX047258
Unique NameCX047258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: M3K1_ARATH (Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 2.520e-65
Identity = 124/179 (69.27%), Postives = 142/179 (79.33%), Query Frame = 3
Query:   51 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAITMNDVKSCKGSPFWMAPEVKR*KSEVG 587
            I SWQKG  LG GSFGSVYEG + DG FFAVKEVSL DQG+Q ++ + QLE EI LLS+ +H NIV+Y GT KD + LYIFLELVTQGSL K+YQ Y L+DS VS YT QIL+GLKYLH++  IHRDIKCANILV+ANG+VKLADFGLAK    ND+KSCKG+PFWMAPEV   K   G
Sbjct:  330 ITSWQKGQLLGRGSFGSVYEGISGDGDFFAVKEVSLLDQGSQAQECIQQLEGEIKLLSQLQHQNIVRYRGTAKDGSNLYIFLELVTQGSLLKLYQRYQLRDSVVSLYTRQILDGLKYLHDKGFIHRDIKCANILVDANGAVKLADFGLAKVSKFNDIKSCKGTPFWMAPEVINRKDSDG 508          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.119e-52
Identity = 109/173 (63.01%), Postives = 129/173 (74.57%), Query Frame = 3
Query:   51 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAITMNDVKSCKGSPF--WMAPEV 563
            I  WQKG  LG GS GSVYEG + DG FFA KEVSL DQG+Q  + + Q+E  I+LLS+ +H NIV+Y GT KDE+ LYIFLELVTQGSL K+YQ   L DS VS YT QIL+GLKYLH++  IHR+IKCAN+LV+ANG+VKLADFGLAK      V S   +P+  WMAPEV
Sbjct: 1623 ITCWQKGQLLGRGSLGSVYEGISADGDFFAFKEVSLLDQGSQAHEWIQQVEGGIALLSQLQHQNIVRYRGTTKDESNLYIFLELVTQGSLRKLYQRNQLGDSVVSLYTRQILDGLKYLHDKGFIHRNIKCANVLVDANGTVKLADFGLAK------VMSLWRTPYWNWMAPEV 1789          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: ANP1_ARATH (Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.033e-34
Identity = 79/179 (44.13%), Postives = 114/179 (63.69%), Query Frame = 3
Query:   54 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQS---VLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAI----TMNDVKSCKGSPFWMAPEV 563
            +SW+KG  +G G+FG+VY G   D G   AVK+V +       E++   + +LE+E+ LL    H NIV+Y GT ++++ L I LE V  GS++ + +++    +S V  YT Q+L GL+YLH   ++HRDIK ANILV+  G +KLADFG +K +    TM   KS KG+P+WMAPEV
Sbjct:   67 ISWRKGQLIGRGAFGTVYMGMNLDSGELLAVKQVLIAANFASKEKTQAHIQELEEEVKLLKNLSHPNIVRYLGTVREDDTLNILLEFVPGGSISSLLEKFGPFPESVVRTYTRQLLLGLEYLHNHAIMHRDIKGANILVDNKGCIKLADFGASKQVAELATMTGAKSMKGTPYWMAPEV 245          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: M3K2_ARATH (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.743e-34
Identity = 77/177 (43.50%), Postives = 112/177 (63.28%), Query Frame = 3
Query:   60 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQS---VLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAI----TMNDVKSCKGSPFWMAPEV 563
            W+KG  +G G+FG+VY G   D G   AVK+V +       E++   + +LE+E+ LL    H NIV+Y GT +++  L I LE V  GS++ + +++    +S V  YT Q+L GL+YLH   ++HRDIK ANILV+  G +KLADFG +K +    T++  KS KG+P+WMAPEV
Sbjct:   68 WRKGQLIGRGAFGTVYMGMNLDSGELLAVKQVLITSNCASKEKTQAHIQELEEEVKLLKNLSHPNIVRYLGTVREDETLNILLEFVPGGSISSLLEKFGAFPESVVRTYTNQLLLGLEYLHNHAIMHRDIKGANILVDNQGCIKLADFGASKQVAELATISGAKSMKGTPYWMAPEV 244          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: MKKA_DICDI (Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium discoideum GN=mkkA PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.142e-33
Identity = 74/176 (42.05%), Postives = 112/176 (63.64%), Query Frame = 3
Query:   54 MSWQKGAPLGSGSFGSVYEGFTDD-GFFFAVKEVSLQDQGTQGE--QSVLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAIT--MNDVKSCKGSPFWMAPEV 563
            + WQKG  LG G +GSVY G   D G  FAVK++ + D  +  +    +L   +EI ++    HDNIV+Y GT  D++ L +FLE +  GS++ +  ++    ++ +  YT QIL GL +LH  ++IHRDIK ANIL++  G VKL+DFG +K+ +  ++  KS +G+P+WMAPEV
Sbjct:  168 IKWQKGQILGRGGYGSVYLGLNKDTGELFAVKQLEIVDINSDPKLKNMILSFSKEIEVMRSLRHDNIVRYLGTSLDQSFLSVFLEYIPGGSISSLLGKFGAFSENVIKVYTKQILQGLSFLHANSIIHRDIKGANILIDTKGIVKLSDFGCSKSFSGIVSQFKSMQGTPYWMAPEV 343          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: M3K3_ARATH (Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.322e-33
Identity = 73/177 (41.24%), Postives = 110/177 (62.15%), Query Frame = 3
Query:   60 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQS---VLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEY-HLKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAI----TMNDVKSCKGSPFWMAPEV 563
            W+KG  +G G+FG VY G   D G   A+K+V +       E++   + +LE+E+ LL    H NIV+Y GT ++ + L I +E V  GS++ + +++    +  +  YT Q+L GL+YLH   ++HRDIK ANILV+  G ++LADFG +K +    T+N  KS KG+P+WMAPEV
Sbjct:   68 WRKGELIGCGAFGRVYMGMNLDSGELLAIKQVLIAPSSASKEKTQGHIRELEEEVQLLKNLSHPNIVRYLGTVRESDSLNILMEFVPGGSISSLLEKFGSFPEPVIIMYTKQLLLGLEYLHNNGIMHRDIKGANILVDNKGCIRLADFGASKKVVELATVNGAKSMKGTPYWMAPEV 244          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: YSK4_HUMAN (SPS1/STE20-related protein kinase YSK4 OS=Homo sapiens GN=YSK4 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.182e-30
Identity = 78/191 (40.84%), Postives = 108/191 (56.54%), Query Frame = 3
Query:   21 FSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGT-QGEQSVLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAI-------TMND-VKSCKGSPFWMAPEV 563
            FS N       + W KG  LG G++G+VY G T  G   AVK+V+L        E+   +L++E+ LL   +H NIV Y GT   EN + IF+E V  GS++ I   +  L +     YT QIL G+ YLHE  V+HRDIK  N+++   G +KL DFG A+ +       T +D +KS  G+P+WMAPEV
Sbjct: 1048 FSENSLKSEEPILWTKGEILGKGAYGTVYCGLTSQGQLIAVKQVALDTSNKLAAEKEYRKLQEEVDLLKALKHVNIVAYLGTCLQENTVSIFMEFVPGGSISSIINRFGPLPEMVFCKYTKQILQGVAYLHENCVVHRDIKGNNVMLMPTGIIKLIDFGCARRLAWAGLNGTHSDMLKSMHGTPYWMAPEV 1238          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: Y8901_DICDI (Probable serine/threonine-protein kinase DDB_G0278901 OS=Dictyostelium discoideum GN=DDB_G0278901 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.543e-30
Identity = 71/168 (42.26%), Postives = 104/168 (61.90%), Query Frame = 3
Query:   78 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHL-KDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAI----TMNDVKSCKGSPFWMAPEV 563
            +G G FG VY+G     G+F A+K++ +  +     +S + L  EI+LL    H NIV+Y+      +  YI +E +  GSL KI + + L  +S V+ Y  Q+LNGL+YLH Q VIHRDIK AN+L++ +GS+KLADFG+A  +    + N   +  G+P+WMAPEV
Sbjct:   28 IGKGGFGVVYKGLHKTKGYFSAIKKIKIMKKKKLQSESQISLMAEINLLKVLSHHNIVRYYEHIPSSSHSYIVMEFIENGSLEKIIKRHGLLPESLVTVYIAQVLNGLEYLHRQGVIHRDIKAANLLISTDGSIKLADFGVATKVSDLSSDNPDDTFAGTPYWMAPEV 195          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: CDC7_SCHPO (Cell division control protein 7 OS=Schizosaccharomyces pombe GN=cdc7 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.000e-29
Identity = 76/167 (45.51%), Postives = 104/167 (62.28%), Query Frame = 3
Query:   69 GAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEY-HLKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAITMNDVKSCKGSPFWMAPEV 563
            G  LG G+FG+VY G    +G   AVK+V L     + + SV+++E  I LL   +H NIV+Y G+ +  + L I LE    GSL  I + +  + ++ V+ YT+Q+L GL YLH Q VIHRDIK ANIL   +G++KLADFG+A  I   +  S  GSP+WMAPEV
Sbjct:   12 GDCLGKGAFGAVYRGLNIKNGETVAVKKVKLSKM-LKSDLSVIKME--IDLLKNLDHPNIVKYRGSYQTNDSLCIILEYCENGSLRSICKNFGKIPENLVALYTFQVLQGLLYLHNQGVIHRDIKGANILTTKDGTIKLADFGVATKINALEDHSVVGSPYWMAPEV 175          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: BYR2_SCHPO (Protein kinase byr2 OS=Schizosaccharomyces pombe GN=byr2 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.706e-29
Identity = 76/193 (39.38%), Postives = 110/193 (56.99%), Query Frame = 3
Query:   24 SLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEY-HLKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAITMNDVK--------SCKGSPFWMAPEV 563
            +L E    + + W +GA +GSGSFG VY G     G   AVK+V L       ++    L+    EI+LL    H++IVQY G+  + + L IFLE V  GS+A +   Y   +++ V  +  Q L GL+YLH + ++HRDIK ANILV+  G +K++DFG++K + +N           S +GS FWMAPEV
Sbjct:  382 TLEEDTDDQSIKWIRGALIGSGSFGQVYLGMNASSGELMAVKQVILDSVSESKDRHAKLLDALAGEIALLQELSHEHIVQYLGSNLNSDHLNIFLEYVPGGSVAGLLTMYGSFEETLVKNFIKQTLKGLEYLHSRGIVHRDIKGANILVDNKGKIKISDFGISKKLELNSTSTKTGGARPSFQGSSFWMAPEV 574          
The following BLAST results are available for this feature:
BLAST of CX047258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
M3K1_ARATH2.520e-6569.27Mitogen-activated protein kinase kinase kinase 1 O... [more]
WRK19_ARATH7.119e-5263.01Probable WRKY transcription factor 19 OS=Arabidops... [more]
ANP1_ARATH1.033e-3444.13Mitogen-activated protein kinase kinase kinase ANP... [more]
M3K2_ARATH8.743e-3443.50Mitogen-activated protein kinase kinase kinase 2 O... [more]
MKKA_DICDI1.142e-3342.05Mitogen-activated protein kinase kinase kinase A O... [more]
M3K3_ARATH3.322e-3341.24Mitogen-activated protein kinase kinase kinase 3 O... [more]
YSK4_HUMAN1.182e-3040.84SPS1/STE20-related protein kinase YSK4 OS=Homo sap... [more]
Y8901_DICDI1.543e-3042.26Probable serine/threonine-protein kinase DDB_G0278... [more]
CDC7_SCHPO1.000e-2945.51Cell division control protein 7 OS=Schizosaccharom... [more]
BYR2_SCHPO1.706e-2939.38Protein kinase byr2 OS=Schizosaccharomyces pombe G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13A12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13A12-A24-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047258 ID=CX047258; Name=CX047258; organism=Citrus sinensis; type=EST; length=796bp
TTATGGAATTGGTTTATAATTTTTCCCTGAATGAGAAATACAGAAGAAGA
ATCATGTCCTGGCAAAAGGGTGCCCCTTTGGGGAGTGGGTCGTTTGGGTC
TGTGTATGAAGGTTTCACTGATGATGGATTCTTTTTTGCTGTGAAGGAGG
TTTCTTTACAGGATCAAGGAACTCAGGGAGAGCAGAGCGTTCTTCAACTT
GAGCAGGAAATTTCTCTTTTGAGTCGGTTTGAACATGATAACATAGTTCA
GTATTTTGGGACAGAAAAGGATGAAAATAAGCTTTATATCTTCCTTGAAC
TTGTAACGCAAGGCTCACTTGCAAAAATCTATCAAGAGTATCACTTGAAG
GATTCTCAAGTCTCTGCATACACATGGCAGATCCTGAATGGCTTAAAGTA
TCTTCATGAGCAGAATGTGATTCACAGGGATATCAAATGTGCAAATATAT
TGGTAAATGCAAATGGATCAGTAAAACTTGCAGATTTTGGGCTGGCAAAG
GCAATTACAATGAATGATGTCAAATCTTGCAAAGGATCTCCATTCTGGAT
GGCCCCTGAGGTAAAGCGGTAGAAATCAGAGGTAGGACTGGATGAAGAAA
CTGGGAAAAAAATGTCAAGAGAAACCGTAGAAGGTTTAGGTAATGCCTTG
AGAAGGAAATGGCATGTCAGTAGATGGAACAGTCTAACAGATCAAGTAAA
TATGCACTGATCCAAGCCTCTAAATATTGTGTATTGGTCAACAATGGGCA
AGTAGATTCTTTGAATAATTATATGGGGAAACTTTCAGAAATTCAA
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