CX047252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX047252 vs. ExPASy Swiss-Prot
Match: PP287_ARATH (Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2) HSP 1 Score: 355.14 bits (910), Expect = 2.648e-97 Identity = 174/256 (67.97%), Postives = 211/256 (82.42%), Query Frame = 1 Query: 55 MPQTLFLKPFISPSSINFSQQNVPVSPLDANLKVHRRVGVICMGMLAPRKFMQKRRKVEVFKDAADEAEKKNWRRLMNQIEEVGSAVAVLRSERTRG-QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYNNAEAIFRRMQSSGPRPSALTYHIILKLFVEANKFKEAEEVVMTLLDEEKSPLKPDQRMFHMMIYM 819 M Q + KPF+S S N SQ+ + + ++ +K+ R V+CMGMLAPRKF+QKRRK+EVFKDAADE ++K WR LM +IE GSAV VLR +T G Q LP+DLVLGTLVR KQLKKWN+VSE+LEWLR Q+WW+F+E+DFLMLITAYGK G+FN AE+VLS ++K G P+V+S+TALME+YGRGG+ NNAEAIFRRMQSSGP PSA+TY IILK FVE +KFKEAEEV TLLDE+KSPLKPDQ+M+HMMIYM Sbjct: 1 MSQAVIFKPFVSVPSSNHSQRKLQNNIINVGVKIQNRFRVVCMGMLAPRKFLQKRRKMEVFKDAADETDQKRWRGLMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYM 256
BLAST of CX047252 vs. ExPASy Swiss-Prot
Match: PP216_ARATH (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana GN=EMB2750 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.950e-11 Identity = 57/207 (27.54%), Postives = 98/207 (47.34%), Query Frame = 1 Query: 157 HRRVGVICMGMLAPRKFMQKRRKVEVFKDAADEAEKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYNNAEAIFRRMQSSGP-RPSALTYHIILKLFVEANKF-------KEAEEVVMT 753 HR VG++ + A + K ++KD + + I+ V + R + G + V TL L K+W EV + LR Q+++ E ++ L+ GK G N+A+K+ M ++G P+V +TAL+ AY R ++A +I +M+S +P TY +LK V+A++F KE +E ++T Sbjct: 26 HRDVGIVRCVLAASKSSPGSVTKKRLWKDGEFPGITEPVNQRRTPIKNVKKKLD--RRSKANGWV---NTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLIT 227
BLAST of CX047252 vs. ExPASy Swiss-Prot
Match: PP124_ARATH (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11 Identity = 35/112 (31.25%), Postives = 60/112 (53.57%), Query Frame = 1 Query: 481 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYNNAEAIFRRMQSSGPRPSALTYHIILKLFVEANKFKEAEEVVMTLLDEEKSPLKPDQRMFHMMIY 816 +L+ AY K G +A V M G P+ +++ L+ +G+ GRY++ +F M+SS P A TY+I++++F E FK EVV D + ++PD + +I+ Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK---EVVTLFHDMVEENIEPDMETYEGIIF 430 The following BLAST results are available for this feature:
BLAST of CX047252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047252 ID=CX047252; Name=CX047252; organism=Citrus sinensis; type=EST; length=821bpback to top |