CX047250

Overview
NameCX047250
Unique NameCX047250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3836 contig Csv1_Contig3836:1..840. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX047250 vs. ExPASy Swiss-Prot
Match: UGT52_DICDI (UDP-sugar-dependent glycosyltransferase 52 OS=Dictyostelium discoideum GN=ugt52 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.007e-32
Identity = 90/285 (31.58%), Postives = 140/285 (49.12%), Query Frame = 2
Query:    2 HLVPKPKDWGPKVDVVGFCFLDLASNYE-PPESLVKWLEAGSK------PIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGL--------------GNLAEPKDS---------IYLLDN-IPHDWLFLQCKXXXXXXXXXXXXXXLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKL-INAINFMLDPKVKERAVELAEAMEKEDGVTGAVKAFFKHYPCSKTQPKPERETSPEPSSCFSISRCFGCS*TLE---KCGLCAVLVC 751
            +LVPKP DW  ++ + G+  L   +N + PP+ L+++L   S       PIYIGFGS+ +  P  ++ +++EA + +G+R II++GWGGL               N  E  DS         IYLL   + H WLF +                L AA PT +VPFFGDQ FWGER+   G+G   IP D  +   L  + I+ + +P V+ +  +++  +++EDGV  A+    ++ P S   P+ E   S  P+SC    + F     ++    C  C  + C
Sbjct: 1373 YLVPKPPDWSGEIAITGYWTLKNQANSDSPPDDLIQFLNEESSTENDDIPIYIGFGSIVIDNPTALSLLLIEAIKLSGKRAIISQGWGGLSIDEHNNNNNNNNNNNNGENSDSNKSSLQSNRIYLLKKPVDHSWLFEKVSLVISHGGAGTVAASLLAAKPTIVVPFFGDQFFWGERIKQTGIG-TSIPFDILTAKSLSSHIISILNEPSVRAKVNKMSHLLKREDGVKTAIDFIHRYLPFSFIPPR-EIPFSSAPNSCMGCKQPFTLLHVMKARVHCHCCGKIFC 1655          
BLAST of CX047250 vs. ExPASy Swiss-Prot
Match: ATG26_CRYNE (Sterol 3-beta-glucosyltransferase OS=Cryptococcus neoformans GN=ATG26 PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 6.042e-28
Identity = 78/233 (33.48%), Postives = 115/233 (49.36%), Query Frame = 2
Query:    5 LVPKPKDWGPKVDVVGFCFLDLAS------NYEPPESLVKWLEAG----SKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGN-LAEPK------------DSIYLLDNIPHDWLFLQCKXXXXXXXXXXXXXXLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFMLDPKVKERAVELAEAMEKEDGVTGAVKAFFKHYPCSKT 634
            +VP P DW   + V G+ FLD A       ++ PP+ LV +++       K +YIGFGS+ V +PE+MT+ +VEA   +G   I++KGW   G+   EPK              I+ +D+I H WLF +                LRA  PT I PFFGDQ FW ERV +  VG     +    L   +  I    D K   +A  + E + KE+G+T A++A ++    +K+
Sbjct: 1238 VVPPPLDWTEWIHVTGYWFLDKADEKQGEKSWTPPQGLVDFIDKAHGEEKKVVYIGFGSIVVSDPEEMTRCVVEAVVNSGVCAILSKGWSDRGSKKGEPKGDSEGADGVKYPPEIFAIDSIDHGWLFPRIDAACHHGGAGTTGASLRAGIPTIIKPFFGDQAFWAERVESLNVGSSIRRLTSHQLASAL--IKATTDEKQISKARVVGEMIRKENGITRAIEAIYRDLEYAKS 1468          
BLAST of CX047250 vs. ExPASy Swiss-Prot
Match: ATG26_PICPG (Sterol 3-beta-glucosyltransferase OS=Pichia pastoris (strain GS115) GN=ATG26 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.346e-27
Identity = 75/226 (33.19%), Postives = 120/226 (53.10%), Query Frame = 2
Query:   11 PKPKDWGPKVDVVGFCFLDL--ASNYEPPESLVKWLEA----GSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGG-----LGNLAEPKDSIYLLDNIPHDWLFLQCKXXXXXXXXXXXXXXLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFMLDPKVKERAVELAEAMEKEDGVTGAVKAFFKHYPCSKTQPKPERE 655
            P   D+   V VVG+ FLD   A +Y+PP+ L++++E     G K +YIGFGS+ V +P+++T+ +++A      R I+NKGW        G   E  + IY   N+PHDWLF +                LRA  PT I PFFGDQ F+  RV   GVG     ++  SL K I  +    + ++ E+A E+ + ++ E+GV+ A++  ++    +K   K +++
Sbjct:  967 PPSMDFPHWVKVVGYWFLDEGEADSYDPPKPLLEFMEKAKTDGKKLVYIGFGSIVVSDPKQLTEAVIDAVLSADVRCILNKGWSDRLGKQTGVEVELPEEIYNSGNVPHDWLFGKIDASVHHGGSGTTGATLRAGIPTIIKPFFGDQFFYANRVEDIGVGIGLRKLNSKSLSKAIKEVT--TNTRIIEKAKEIGKQIQSENGVSAAIRCLYQEMEYAKKLSKSKQK 1190          
BLAST of CX047250 vs. ExPASy Swiss-Prot
Match: ATG26_EMENI (Sterol 3-beta-glucosyltransferase OS=Emericella nidulans GN=atg26 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.114e-27
Identity = 77/236 (32.63%), Postives = 120/236 (50.85%), Query Frame = 2
Query:    5 LVPKPKDWGPKVDVVGFCFLDLASNYEPPESLVKWLEA----GSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGG-LGNLAEPK------DSIYLLDNIPHDWLFLQCKXXXXXXXXXXXXXXLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAI-NFMLDPKVKERAVELAEAMEKEDGVTGAVKAFFKHYPCSKTQPKPERETSPEPSS 676
            +VP P D+   V + G+ FL  +S++ PP +L ++++     G K +YIGFGS+ V +P  +T+ +VE+ ++   R I++KGW   LG+    K        I+ + + PHDWLF Q                LRA  PT I PFFGDQ F+G RV   GVG   I + + ++     A+     D ++  RA +L E +  EDGV  A++A ++    + T  +     S  P S
Sbjct: 1100 VVPPPLDFPDWVRITGYWFLSESSDWTPPRALAEFIQCARQDGKKIVYIGFGSIVVSDPSALTRTVVESVQKADVRCILSKGWSARLGDPTSTKVEIPLPPEIHQIQSAPHDWLFSQIDAAAHHGGAGTTGASLRAGVPTIIKPFFGDQFFFGNRVEDLGVG---ICMKKLNVSVFSRALWTATHDERMIVRAKQLGERIRSEDGVATAIQAIYRDLEYATTLTRQRSSISSTPFS 1332          
BLAST of CX047250 vs. ExPASy Swiss-Prot
Match: ATG26_KLULA (Sterol 3-beta-glucosyltransferase OS=Kluyveromyces lactis GN=ATG26 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.330e-26
Identity = 73/211 (34.60%), Postives = 108/211 (51.18%), Query Frame = 2
Query:   11 PKPKDWGPKVDVVGFCFLDLASNYEPPESLVKWL----EAGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGG-LGN-LAEPKDS-----IYLLDNIPHDWLFLQCKXXXXXXXXXXXXXXLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFMLDPKVKERAVELAEAMEKEDGVTGAVKAFF 610
            P   D+   + V G+ FLD   +Y+PP   +++L    E   K +YIGFGS+ V +PEKMT  I+EA    G   ++NKGW    G+ LA+  D      IY   ++PHDWLF +                LRA  PT I PFFGDQ F+  RV   G G     ++  SL K +  +    + ++ ++A ++ E++ KE GV  A+ A +
Sbjct:  942 PPSVDFNEWIKVTGYWFLDEKRSYKPPAEFMEFLNKARELKKKVVYIGFGSIVVNDPEKMTDTIIEAVRDAGVYCVLNKGWSNRFGDPLAKKIDKELPSYIYNSGDVPHDWLFTKIDATVHHGGSGTTGASLRAGLPTIIKPFFGDQFFYASRVEDIGAGVALKKLNRSSLAKALKEVT--TNTRIIQKARQIGESISKEHGVATAIGAIY 1150          
BLAST of CX047250 vs. ExPASy Swiss-Prot
Match: ATG26_ASPNC (Sterol 3-beta-glucosyltransferase OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=atg26 PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 9.645e-26
Identity = 74/236 (31.36%), Postives = 117/236 (49.58%), Query Frame = 2
Query:    5 LVPKPKDWGPKVDVVGFCFLDLASNYEPPESLVKWLEAGSKP----IYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGG-LGNLAEPKD------SIYLLDNIPHDWLFLQCKXXXXXXXXXXXXXXLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAI-NFMLDPKVKERAVELAEAMEKEDGVTGAVKAFFKHYPCSKTQPKPERETSPEPSS 676
            +VP P D+   + + G+ FL   S++ PP  LV +++   K     +YIGFGS+ V +P  +T+ ++E+ ++   R I++KGW   LG+ A  K        IY + + PHDWLF                  LRA  PT + PFFGDQ F+G RV   GVG   I + + ++     A+     D ++  +A +L   +  EDGV  A++A ++    +KT  +     S  P S
Sbjct: 1101 VVPPPLDYPDWIRITGYWFLSEGSDWTPPAELVDFIQRARKDEKKVVYIGFGSIVVSDPSALTRTVIESVQKADVRCILSKGWSDRLGDPASAKSEVPLPPEIYQIQSAPHDWLFSHIDAAAHHGGAGTTGASLRAGVPTIVKPFFGDQFFFGTRVEDLGVG---ICLKKLNVTMFSRALWEATHDERMIVKAHKLGAQIRSEDGVDTAIQAIYRDLEYAKTLAQARSNVSSTPFS 1333          
BLAST of CX047250 vs. ExPASy Swiss-Prot
Match: ATG26_LEPMC (Sterol 3-beta-glucosyltransferase OS=Leptosphaeria maculans GN=ATG26 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.645e-25
Identity = 74/241 (30.71%), Postives = 116/241 (48.13%), Query Frame = 2
Query:    2 HLVPKPKDWGPKVDVVGFCFLDLASNYEPPESLVKWLEA----GSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWGGLGNLAEPKDS----------IYLLDNIPHDWLFLQCKXXXXXXXXXXXXXXLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFMLDPKVKERAVELAEAMEKEDGVTGAVKAFFKHYPCSKTQPKPERETSPEPSSCF 682
            H+VP P DW   V V G+ FLD A  YEPP  LV +++     G K +Y+GFGS+ + +P  +T+ +V++  +   R +++KGW    +  E KD+          I+ + + PHDWLF Q                LRA  PT I PFFGDQ F+ +RV   GVG     V+     + +  +       VK R   L + + K++G   A++  ++    +++  K   +   E S  F
Sbjct: 1160 HVVPPPLDWPDWVRVTGYWFLDEADTYEPPADLVAFMDKARKDGKKLVYVGFGSIVIDDPAALTKTVVDSVLKADVRCVLSKGW---SDRLETKDASKPEIPLPSEIFQIQSAPHDWLFKQMDAAVHHGGSGTTGASLRAGIPTIIKPFFGDQYFFAQRVEDMGVGVWLKKVNTSVFSRALWEVTNSQRMIVKARV--LGQKIRKDNGTQVAIQTIYRELDRARSLVKKHAKLDGELSEEF 1395          
BLAST of CX047250 vs. ExPASy Swiss-Prot
Match: ATG26_YEAST (Sterol 3-beta-glucosyltransferase OS=Saccharomyces cerevisiae GN=ATG26 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.787e-25
Identity = 75/214 (35.05%), Postives = 109/214 (50.93%), Query Frame = 2
Query:    5 LVPKPKDWGPKVDVVGFCFLDLASNYEPPESLVKWLEA----GSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWG-GLGNLAEPKDSIYL------LDNIPHDWLFLQCKXXXXXXXXXXXXXXLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFMLDPKV-KERAVELAEAMEKEDGVTGAVKAFF 610
            + P   D+   V V G+ FLD  S ++PP  L +++      G K +YIGFGS+ V   ++MT+ +VEA  +     I+NKGW   LG+ A  K  + L      + N+PHDWLF Q                LRA  PT I PFFGDQ F+  RV   GVG   I + + +   L +A+      K+ K+RA  + + + KEDG+  A+ A +
Sbjct:  946 IFPPSIDFSEWVRVTGYWFLDDKSTFKPPAELQEFISEARSKGKKLVYIGFGSIVVSNAKEMTEALVEAVMEADVYCILNKGWSERLGDKAAKKTEVDLPRNILNIGNVPHDWLFPQVDAAVHHGGSGTTGASLRAGLPTVIKPFFGDQFFYAGRVEDIGVG---IALKKLNAQTLADALKVATTNKIMKDRAGLIKKKISKEDGIKTAISAIY 1156          
BLAST of CX047250 vs. ExPASy Swiss-Prot
Match: ATG26_YEAS7 (Sterol 3-beta-glucosyltransferase OS=Saccharomyces cerevisiae (strain YJM789) GN=ATG26 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.787e-25
Identity = 75/214 (35.05%), Postives = 109/214 (50.93%), Query Frame = 2
Query:    5 LVPKPKDWGPKVDVVGFCFLDLASNYEPPESLVKWLEA----GSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWG-GLGNLAEPKDSIYL------LDNIPHDWLFLQCKXXXXXXXXXXXXXXLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFMLDPKV-KERAVELAEAMEKEDGVTGAVKAFF 610
            + P   D+   V V G+ FLD  S ++PP  L +++      G K +YIGFGS+ V   ++MT+ +VEA  +     I+NKGW   LG+ A  K  + L      + N+PHDWLF Q                LRA  PT I PFFGDQ F+  RV   GVG   I + + +   L +A+      K+ K+RA  + + + KEDG+  A+ A +
Sbjct:  946 IFPPSIDFSEWVRVTGYWFLDDKSTFKPPAELQEFISEARSKGKKLVYIGFGSIVVSNAKEMTEALVEAVMEADVYCILNKGWSERLGDKAAKKTEVDLPRNILNIGNVPHDWLFPQVDAAVHHGGSGTTGASLRAGLPTVIKPFFGDQFFYAGRVEDIGVG---IALKKLNAQTLADALKVATTNKIMKDRAGLIKKKISKEDGIKTAISAIY 1156          
BLAST of CX047250 vs. ExPASy Swiss-Prot
Match: ATG26_VANPO (Sterol 3-beta-glucosyltransferase OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=ATG26 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.787e-25
Identity = 71/215 (33.02%), Postives = 114/215 (53.02%), Query Frame = 2
Query:    5 LVPKPKDWGPKVDVVGFCFLDLASNYEPPESLVKWL----EAGSKPIYIGFGSLPVQEPEKMTQIIVEAFEQTGQRGIINKGWG------GLGNLAEPK--DSIYLLDNIPHDWLFLQCKXXXXXXXXXXXXXXLRAACPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLINAINFML-DPKVKERAVELAEAMEKEDGVTGAVKAFF 610
            + P   D+   + V G+ FLD + ++EP + L  ++    + G K +YIGFGS+ V   ++MT+ ++++  +T    I+NKGW        L    EP+  ++I+L D+IPHDWLF +                L+A  P  I PFFGDQ F+  R+   G G   I + + ++  L NAI  +L D  +K +AV L + + KE+GVT A+   +
Sbjct:  963 IFPPAIDFDEWIKVTGYWFLDESESFEPSQELETFISKARKLGKKLVYIGFGSIVVNNAKEMTRAVIDSVLETDIFCILNKGWSERLGKEELRYEEEPEYPETIFLCDSIPHDWLFPKVDAAVHHGGSGTTGATLKAGTPVVIKPFFGDQFFFASRIEDIGAG---IALKKLNVSSLSNAIKKVLTDKSIKRKAVSLKKRVAKENGVTTAINCIY 1174          
The following BLAST results are available for this feature:
BLAST of CX047250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
UGT52_DICDI9.007e-3231.58UDP-sugar-dependent glycosyltransferase 52 OS=Dict... [more]
ATG26_CRYNE6.042e-2833.48Sterol 3-beta-glucosyltransferase OS=Cryptococcus ... [more]
ATG26_PICPG1.346e-2733.19Sterol 3-beta-glucosyltransferase OS=Pichia pastor... [more]
ATG26_EMENI5.114e-2732.63Sterol 3-beta-glucosyltransferase OS=Emericella ni... [more]
ATG26_KLULA4.330e-2634.60Sterol 3-beta-glucosyltransferase OS=Kluyveromyces... [more]
ATG26_ASPNC9.645e-2631.36Sterol 3-beta-glucosyltransferase OS=Aspergillus n... [more]
ATG26_LEPMC1.645e-2530.71Sterol 3-beta-glucosyltransferase OS=Leptosphaeria... [more]
ATG26_YEAST4.787e-2535.05Sterol 3-beta-glucosyltransferase OS=Saccharomyces... [more]
ATG26_YEAS74.787e-2535.05Sterol 3-beta-glucosyltransferase OS=Saccharomyces... [more]
ATG26_VANPO4.787e-2533.02Sterol 3-beta-glucosyltransferase OS=Vanderwaltozy... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_13A07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13A07-A14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047250 ID=CX047250; Name=CX047250; organism=Citrus sinensis; type=EST; length=840bp
GCACCTTGTTCCTAAACCAAAAGATTGGGGACCTAAGGTTGATGTGGTTG
GATTTTGCTTTCTTGATCTTGCATCAAACTATGAACCTCCAGAATCACTT
GTAAAATGGCTTGAAGCTGGTTCAAAGCCTATTTACATTGGATTTGGTAG
CCTTCCTGTTCAAGAGCCAGAAAAAATGACCCAGATAATTGTGGAAGCAT
TTGAACAAACTGGACAGAGGGGTATTATAAACAAAGGCTGGGGTGGCCTT
GGTAACCTGGCTGAACCAAAGGACTCAATATACCTATTGGACAACATTCC
CCATGACTGGTTGTTCTTACAATGCAAGGCTGTGGTTCATCACGGTGGTG
CGGGTACAACTGCAGCCGGTCTTAGAGCTGCGTGCCCAACAACCATTGTA
CCTTTCTTCGGTGACCAGCCTTTCTGGGGAGAGCGAGTACATGCCAGAGG
AGTAGGTCCTCCGCCCATTCCGGTTGACGAATTCTCACTTCCCAAGTTGA
TTAATGCAATAAATTTCATGCTAGATCCAAAGGTGAAGGAGCGTGCAGTT
GAACTTGCCGAGGCCATGGAGAAGGAAGACGGGGTAACTGGAGCAGTGAA
AGCGTTTTTTAAACATTATCCTTGCTCAAAGACTCAGCCTAAGCCGGAGA
GGGAGACATCACCGGAACCATCTAGTTGTTTCTCCATTAGTAGGTGTTTT
GGCTGTTCCTGAACCTTAGAAAAATGTGGTCTGTGTGCAGTTCTTGTATG
CTTCGCAGCTATATATAGCCTGCCAGCTAACATGGTGACGGGCCCTCAAC
ATTGATTTTGCCGCCAACCACCGTCTCATGAATCCTTTGC
back to top