CX047233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX047233 vs. ExPASy Swiss-Prot
Match: NU1M_CITLA (NADH-ubiquinone oxidoreductase chain 1 OS=Citrullus lanatus GN=ND1 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 7.742e-35 Identity = 75/83 (90.36%), Postives = 75/83 (90.36%), Query Frame = 3 Query: 288 LICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRG 536 LICVG N SEIVMAQKQIW GIPLFPVLVMFFIS LAETNRAPFDLPEAEAESVAGYNVEYA DAILNSPLLAEANVPG G Sbjct: 135 LICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYAWDAILNSPLLAEANVPGXPG 217 HSP 2 Score: 23.0978 bits (48), Expect = 7.742e-35 Identity = 8/9 (88.89%), Postives = 8/9 (88.89%), Query Frame = 2 Query: 521 PGVPGTHSD 547 PG PGTHSD Sbjct: 213 PGXPGTHSD 221
BLAST of CX047233 vs. ExPASy Swiss-Prot
Match: NU1M_WHEAT (NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum GN=ND1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.836e-30 Identity = 72/97 (74.23%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 282 TVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGGSLP 572 TVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAE VAGYNVEY+ L AN+ GL GG LP Sbjct: 157 TVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAELVAGYNVEYSSMGFALFFLGEYANMILMSGLCTLLFLGGWLP 253
BLAST of CX047233 vs. ExPASy Swiss-Prot
Match: NU1M_OENBE (NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera bertiana GN=ND1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.836e-30 Identity = 72/97 (74.23%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 282 TVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGGSLP 572 TVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAE VAGYNVEY+ L AN+ GL GG LP Sbjct: 163 TVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAELVAGYNVEYSSMGFALFFLGEYANMILMSGLCTLLFLGGWLP 259
BLAST of CX047233 vs. ExPASy Swiss-Prot
Match: NU1M_ARATH (NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana GN=ND1 PE=1 SV=4) HSP 1 Score: 133.265 bits (334), Expect = 1.836e-30 Identity = 72/97 (74.23%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 282 TVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGGSLP 572 TVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAE VAGYNVEY+ L AN+ GL GG LP Sbjct: 157 TVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAELVAGYNVEYSSMGFALFFLGEYANMILMSGLCTLFFLGGWLP 253
BLAST of CX047233 vs. ExPASy Swiss-Prot
Match: NU1M_PETHY (NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida GN=ND1 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.528e-27 Identity = 69/97 (71.13%), Postives = 73/97 (75.26%), Query Frame = 3 Query: 282 TVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGGSLP 572 TVLICVGS N SEIVMAQKQIW GIPLFPVLVMFFIS LAETNRAPFDLPEAEAESVAGYNVEY+ S L AN+ GL + + GG P Sbjct: 157 TVLICVGSRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYSSMGSALSFLGEYANMILMSGLCTSLSPGGWPP 253
BLAST of CX047233 vs. ExPASy Swiss-Prot
Match: NU1M_MARPO (NADH-ubiquinone oxidoreductase chain 1 OS=Marchantia polymorpha GN=ND1 PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 3.353e-24 Identity = 51/65 (78.46%), Postives = 58/65 (89.23%), Query Frame = 3 Query: 282 TVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYA 476 +V++C GSCN SEIV+AQ +IWF PLFPV +MFFISCLAETNRAPFDLPEAEAE VAGYNVEY+ Sbjct: 160 SVILCAGSCNFSEIVLAQTRIWFVFPLFPVFLMFFISCLAETNRAPFDLPEAEAELVAGYNVEYS 224
BLAST of CX047233 vs. ExPASy Swiss-Prot
Match: NU1M_CHOCR (NADH-ubiquinone oxidoreductase chain 1 OS=Chondrus crispus GN=ND1 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.132e-22 Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 3 Query: 285 VLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYA 476 VL+C GS N +EIV+AQ+ IWF IPLFP+ +MF+IS LAETNRAPFDLPEAEAE VAGYNVEY+ Sbjct: 159 VLLCSGSLNFTEIVLAQQSIWFVIPLFPIFIMFYISILAETNRAPFDLPEAEAELVAGYNVEYS 222
BLAST of CX047233 vs. ExPASy Swiss-Prot
Match: NUOH_PELUB (NADH-quinone oxidoreductase subunit H OS=Pelagibacter ubique GN=nuoH PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20 Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 3 Query: 285 VLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYA 476 VL+CVGS NL++I+MAQ+ +WF IPLFP+ V+FFIS LAETNR PFDLPEAEAE VAGY EY+ Sbjct: 163 VLLCVGSLNLNDIIMAQENLWFIIPLFPMFVIFFISALAETNRPPFDLPEAEAELVAGYQTEYS 226
BLAST of CX047233 vs. ExPASy Swiss-Prot
Match: NU1M_CYACA (NADH-ubiquinone oxidoreductase chain 1 OS=Cyanidium caldarium GN=ND1 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.249e-20 Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 3 Query: 285 VLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYA 476 VL+C G+ NL EIV+AQ+ IW+ PLFP+ +MFFIS LAETNR+PFDLPEAEAE VAGYNVEY+ Sbjct: 176 VLLCSGTLNLKEIVLAQQNIWYIFPLFPLFLMFFISSLAETNRSPFDLPEAEAELVAGYNVEYS 239
BLAST of CX047233 vs. ExPASy Swiss-Prot
Match: NUOH_RHOCS (NADH-quinone oxidoreductase subunit H OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=nuoH PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.545e-20 Identity = 44/65 (67.69%), Postives = 54/65 (83.08%), Query Frame = 3 Query: 282 TVLICVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYA 476 TVL+CVGS NLS++V AQK +WF IPL P+ V+FFIS LAETNRAPFDLPE E+E V G++ EY+ Sbjct: 167 TVLLCVGSLNLSDVVEAQKTVWFAIPLLPMFVIFFISALAETNRAPFDLPEGESELVGGFHTEYS 231 The following BLAST results are available for this feature:
BLAST of CX047233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047233 ID=CX047233; Name=CX047233; organism=Citrus sinensis; type=EST; length=884bpback to top |