EY735629

Overview
NameEY735629
Unique NameEY735629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1066 contig Csv1_Contig1066:325..821. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3PC_MAGLI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Magnolia liliiflora GN=GAPC PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 4.170e-64
Identity = 119/144 (82.64%), Postives = 123/144 (85.42%), Query Frame = 2
Query:   65 KVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            K+KIGINGFGRIG LVARV LQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD KTLLFGEKPVTVFGVRNPEEIPW ETGAE+VVESTGVFT               VIISAPSKDAPM+VVGVNEHEYK  +
Sbjct:    5 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDSKTLLFGEKPVTVFGVRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKSNI 148          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_ATRNU (Glyceraldehyde-3-phosphate dehydrogenase OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 1.213e-63
Identity = 118/146 (80.82%), Postives = 124/146 (84.93%), Query Frame = 2
Query:   59 MGKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            M KVKIGINGFGRIG LVARVILQ DD ELVA+NDPFITTDYMTYMFKYDSVHGQWKHHELKVKD+KTLLFGE+PVTVFG RNPEEIPW +TGA+YVVESTGVFT               VIISAPSKDAPM+VVGVNEHEYK EL
Sbjct:    1 MAKVKIGINGFGRIGRLVARVILQSDDCELVAINDPFITTDYMTYMFKYDSVHGQWKHHELKVKDEKTLLFGERPVTVFGNRNPEEIPWGQTGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKSEL 146          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3PC_ARATH (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Arabidopsis thaliana GN=GAPC PE=2 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 6.022e-63
Identity = 113/144 (78.47%), Postives = 126/144 (87.50%), Query Frame = 2
Query:   65 KVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            K++IGINGFGRIG LVARV+LQRDDVELVAVNDPFITT+YMTYMFKYDSVHGQWKH+ELK+KD+KTLLFGEKPVTVFG+RNPE+IPWAE GA+YVVESTGVFT               V+ISAPSKDAPM+VVGVNEHEYK +L
Sbjct:    5 KIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHNELKIKDEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSDL 148          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3PC_PETHY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida GN=GAPC PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 2.989e-62
Identity = 115/146 (78.77%), Postives = 122/146 (83.56%), Query Frame = 2
Query:   59 MGKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            M K+KIGINGFGRIG LVARV LQRDDVELVAVNDPFI+ +YMTYMFKYDSVHGQWKHHELK KDDKTLLFGEKPVTVFG+RNPEEIPW E GA+YVVESTGVFT               VIISAPSKDAPM+VVGVNE EYK +L
Sbjct:    1 MAKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISVEYMTYMFKYDSVHGQWKHHELKAKDDKTLLFGEKPVTVFGIRNPEEIPWGEAGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEKEYKSDL 146          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3PC_SINAL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Sinapis alba GN=GAPC PE=2 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 5.098e-62
Identity = 113/144 (78.47%), Postives = 125/144 (86.81%), Query Frame = 2
Query:   65 KVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            K+KIGINGFGRIG LVARVILQR+DVELVAVNDPFITT+YMTYMFKYDSVHGQWKH+ELKVKD+KTLLFGEKPVTVFG+RNPE+IPW E GA++VVESTGVFT               V+ISAPSKDAPM+VVGVNEHEYK +L
Sbjct:    5 KIKIGINGFGRIGRLVARVILQRNDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSDL 148          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3PC_DIACA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus GN=GAPC PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 5.098e-62
Identity = 115/146 (78.77%), Postives = 123/146 (84.25%), Query Frame = 2
Query:   59 MGKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            M  +KIGINGFGRIG LVARVILQR+D ELVAVNDPFITT+YMTYMFKYDSVHGQWKHH++KVKD+KTLLFGEK VTVFG RNPEEIPW  TGA+YVVESTGVFT               VIISAPSKDAPM+VVGVNEHEYKPEL
Sbjct:    1 MAPIKIGINGFGRIGRLVARVILQREDCELVAVNDPFITTEYMTYMFKYDSVHGQWKHHDIKVKDEKTLLFGEKAVTVFGNRNPEEIPWGGTGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPEL 146          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3PC_RANAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ranunculus acris GN=GAPC PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 4.316e-61
Identity = 113/145 (77.93%), Postives = 121/145 (83.45%), Query Frame = 2
Query:   62 GKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            GK+KIGINGFGRIG LVARV L RDDVELVAVNDPFITTDYMTYMFKYD+VHGQWKHHELKVKD+KTLLFGEKPVTVFG RNPEEIPW ETGAE+VVESTGVFT               V+ISAPS DAPM+VVGVN  EYK ++
Sbjct:    3 GKIKIGINGFGRIGRLVARVALARDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHELKVKDEKTLLFGEKPVTVFGCRNPEEIPWGETGAEFVVESTGVFTTKEKASAHLKGGAKKVVISAPSADAPMFVVGVNHTEYKSDI 147          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3PC_GINBI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ginkgo biloba PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 7.362e-61
Identity = 112/145 (77.24%), Postives = 120/145 (82.76%), Query Frame = 2
Query:   62 GKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            GK+KIGINGFGRIG LVARV L RDD+ELVAVNDPFI+TDYMTYMFKYDSVHGQWK HE+KVKD  TLLFGEK VTVFG RNPEEIPW ETG EYVVESTGVFT               V+I+APSKDAPM+VVGVNEHEYKP+L
Sbjct:    5 GKIKIGINGFGRIGRLVARVALLRDDIELVAVNDPFISTDYMTYMFKYDSVHGQWKKHEVKVKDSNTLLFGEKAVTVFGCRNPEEIPWGETGVEYVVESTGVFTDKEKAAAHIKGGAKKVVITAPSKDAPMFVVGVNEHEYKPDL 149          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3PC_CRAPL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Craterostigma plantagineum GN=GAPC PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 4.772e-60
Identity = 113/146 (77.40%), Postives = 121/146 (82.88%), Query Frame = 2
Query:   59 MGKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            M KVKIGINGFGRIG LVARV L RDDVELVAVNDPFIT DYM YMFKYD+VHGQ+KHHELKVKD+KTLLFG+KPV VFG+RNPEEIPWAETGAEYVVESTGVFT               VIISAPSKDAPM+VVGVNE  Y P++
Sbjct:    1 MAKVKIGINGFGRIGRLVARVALVRDDVELVAVNDPFITVDYMAYMFKYDTVHGQYKHHELKVKDEKTLLFGDKPVAVFGLRNPEEIPWAETGAEYVVESTGVFTEKEKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEKTYTPDI 146          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3PC_ANTMA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Antirrhinum majus GN=GAPC PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.063e-59
Identity = 114/146 (78.08%), Postives = 120/146 (82.19%), Query Frame = 2
Query:   59 MGKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            M  +KIGINGFGRIG LVARV LQRDDVELVAVNDPFI+TDYMTYMFKYDSVHG WKHHELKVKD+KTLLFGEKPV VFG RNPEEIP A TGAEY+VESTGVFT               VIISAPSKDAPM+VVGVNE EYK +L
Sbjct:    1 MAPIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGAWKHHELKVKDEKTLLFGEKPVVVFGRRNPEEIPRASTGAEYIVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEKEYKSDL 146          
The following BLAST results are available for this feature:
BLAST of EY735629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 293
Match NameE-valueIdentityDescription
G3PC_MAGLI4.170e-6482.64Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_ATRNU1.213e-6380.82Glyceraldehyde-3-phosphate dehydrogenase OS=Atripl... [more]
G3PC_ARATH6.022e-6378.47Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PETHY2.989e-6278.77Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_SINAL5.098e-6278.47Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_DIACA5.098e-6278.77Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_RANAC4.316e-6177.93Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_GINBI7.362e-6177.24Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_CRAPL4.772e-6077.40Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ANTMA1.063e-5978.08Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-A04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735629 ID=EY735629; Name=EY735629; organism=Citrus sinensis; type=EST; length=497bp
CACGCGTCCGAACTTTCTTCACCACTCTTTCACCGCTCAATTTCATCTCT
CGAGAATCATGGGGAAGGTCAAGATCGGAATCAACGGATTCGGAAGAATT
GGTACGCTGGTGGCAAGAGTCATCTTGCAGAGGGACGATGTTGAACTCGT
TGCTGTTAATGATCCCTTTATCACAACCGATTACATGACATACATGTTTA
AGTACGACAGTGTTCACGGTCAATGGAAGCACCATGAATTGAAGGTTAAG
GACGATAAGACCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGT
TAGGAACCCAGAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTG
TGGAGTCGACTGGAGTCTTTACAGACAAGGATAAGGCTGCTGCCCATTTG
AAGGGTGGTGCTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCC
TATGTATGTTGTGGGTGTCAATGAGCACGAGTACAAACCAGAGCTCA
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