CX047198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.357e-44 Identity = 89/118 (75.42%), Postives = 94/118 (79.66%), Query Frame = -2 Query: 2 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 355 M RKFFVGGNWKCNGTSEEVKKIV+ LNEAE VK+LLR+DFHVAAQNCWV+KGGAFTGEVSAEMLVNL IPWVILGHSERRALLNESN+FVGDK AYAL Sbjct: 1 MGRKFFVGGNWKCNGTSEEVKKIVTLLNEAEVPSEDVVEVVVSPPYVFLPFVKNLLRADFHVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 8.797e-44 Identity = 88/118 (74.58%), Postives = 95/118 (80.51%), Query Frame = -2 Query: 2 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 355 MARKFFVGGNWKCNGT+EEVKKIV+TLNEA+ VKS LRSDF VAAQNCWV+KGGAFTGEVSAEMLVNL IPWVILGHSERRA+LNES++FVGDKVAYAL Sbjct: 1 MARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDFFVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 9.726e-43 Identity = 86/118 (72.88%), Postives = 93/118 (78.81%), Query Frame = -2 Query: 2 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 355 M RKFFVGGNWKCNGT+EEVKKI++TLN A+ VK+ LR DFHVAAQNCWV+KGGAFTGEVSAEMLVNLSIPWVILGHSERRALL ESN+FVGDKVAYAL Sbjct: 1 MGRKFFVGGNWKCNGTAEEVKKILATLNAADVPSQDVVEVVVSPPYVFLPLVKNELRPDFHVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLGESNEFVGDKVAYAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3) HSP 1 Score: 167.933 bits (424), Expect = 1.405e-41 Identity = 82/118 (69.49%), Postives = 91/118 (77.12%), Query Frame = -2 Query: 2 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 355 M RKFFVGGNWKCNGT+++V+KIV TLNE + VKS LR +FHVAAQNCWV+KGGAFTGEVSAEMLVNL +PWVILGHSERRALL ESN+FVGDKVAYAL Sbjct: 1 MGRKFFVGGNWKCNGTTDQVEKIVKTLNEGQVPPSDVVEVVVSPPYVFLPVVKSQLRQEFHVAAQNCWVKKGGAFTGEVSAEMLVNLGVPWVILGHSERRALLGESNEFVGDKVAYAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 3.825e-39 Identity = 80/118 (67.80%), Postives = 88/118 (74.58%), Query Frame = -2 Query: 2 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 355 M RKFFVGGNWKCNGT+++V KIV LNE + VKS LR + VAAQNCWV+KGGAFTGEVSAEMLVNLSIPWVILGHSERR+LL ESN+FVGDKVAYAL Sbjct: 1 MGRKFFVGGNWKCNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_HORVU (Triosephosphate isomerase, cytosolic OS=Hordeum vulgare PE=1 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 3.031e-36 Identity = 74/118 (62.71%), Postives = 85/118 (72.03%), Query Frame = -2 Query: 2 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 355 M RKFFVGGNWKCNGT E+V+ IV TLN + VK+ LR + VAAQNCWV+KGGAFTGEVSAEML NL +PWVILGHSERR+LL ES++FVG+KVAYAL Sbjct: 1 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQIVSPDVVEVVVSPPYVFLPIVKAKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRSLLGESSEFVGEKVAYAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_SECCE (Triosephosphate isomerase, cytosolic OS=Secale cereale PE=2 SV=3) HSP 1 Score: 149.443 bits (376), Expect = 5.169e-36 Identity = 75/118 (63.56%), Postives = 85/118 (72.03%), Query Frame = -2 Query: 2 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 355 M RKFFVGGNWKCNGT +V+ IV+TLN + VK LR + VAAQNCWV+KGGAFTGEVSAEMLVNL IPWVILGHSERR+LL ES++FVG+KVAYAL Sbjct: 1 MGRKFFVGGNWKCNGTVSQVETIVNTLNAGQIASPDVVEVVVSPPYVFLPTVKDKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRSLLAESSEFVGEKVAYAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.838e-34 Identity = 71/117 (60.68%), Postives = 77/117 (65.81%), Query Frame = -2 Query: 5 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYA 355 M RKFFVGGNWKCNGT E V KIV TLNE + L+ + VAAQNCWV+KGGAFTGEVSA+ML NL I WVILGHSERR LL ESN+FVG K AYA Sbjct: 1 MGRKFFVGGNWKCNGTQESVSKIVDTLNEPTIAANDVVTVVVSPPYVFLPDENAELKHEIQVAAQNCWVKKGGAFTGEVSAQMLANLGITWVILGHSERRTLLGESNEFVGKKAAYA 117
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIC_SPIOL (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea GN=TPIP1 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.386e-27 Identity = 62/123 (50.41%), Postives = 74/123 (60.16%), Query Frame = -2 Query: 2 IVVMAR--KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 364 +V MA KFFVGGNWKCNGT E + K+VS LN A KS L ++AQNCW+ KGGAFTGE+S E L +L WVILGHSERR ++ E N+F+G K AYAL Sbjct: 64 VVAMAGSGKFFVGGNWKCNGTKESITKLVSDLNSATLEADVDVVVAPPFVYIDQV--KSSLTGRVEISAQNCWIGKGGAFTGEISVEQLKDLGCQWVILGHSERRHVIGEQNEFIGKKAAYAL 184
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.177e-26 Identity = 59/115 (51.30%), Postives = 71/115 (61.74%), Query Frame = -2 Query: 2 KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 346 KFFVGGNWKCNGT E + K+VS LN A KS L V+AQN W+ KGGAFTGE+SAE LV++ WVILGHSERR ++ E ++F+G K AYAL Sbjct: 48 KFFVGGNWKCNGTKESISKLVSDLNAATLESDVDVVVAPPFIYIDQV--KSSLTDRIEVSAQNTWIGKGGAFTGEISAEQLVDIGCQWVILGHSERRHVIGEDDEFIGKKAAYAL 160 The following BLAST results are available for this feature:
BLAST of CX047198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047198 ID=CX047198; Name=CX047198; organism=Citrus sinensis; type=EST; length=386bpback to top |