CX047187

Overview
NameCX047187
Unique NameCX047187
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047187 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.849e-64
Identity = 125/187 (66.84%), Postives = 150/187 (80.21%), Query Frame = 2
Query:   11 LLAILACLVGSSNGSLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERDE-TMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIKGPRVVGIAGGEDETAKLQSE-ARQEL 565
            L  +L C V  +NGSLL PF D P +LL+DLW++R  DPFRVLE IPF +++DE +MA+SPARVDWKETPEGH IMLDVPG+KR+E+K+EVEENRVLRVSG         GD WHRVERS+GKFWRQF+LP NVDLDSV+AKLENGVLTL+L KLSP +IKGPRVV IAG + +   L ++ A+QEL
Sbjct:    8 LFFLLLC-VAKANGSLL-PFMDPPITLLADLWSDRFPDPFRVLEHIPFGVDKDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPGKIKGPRVVSIAGEDHQQGNLNNDGAKQEL 192          
BLAST of CX047187 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.333e-64
Identity = 119/183 (65.03%), Postives = 145/183 (79.23%), Query Frame = 2
Query:   17 AILACLVGSSNGSLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIKGPRVVGIAGGEDETAKLQSEARQEL 565
            A+L   + +S GSL +     P SLLSDLW +R  DPF++LE+IP  LERD ++ALSPARVDWKET EGH IMLD+PG+K+DE+KIEVEEN VLRVSG         GDQWHRVERS+GKFWRQFKLPDNVD++SV+AKLENGVLT++L KLSP+++KGPRVV IA  ED+TAK+ S   +EL
Sbjct:   13 ALLLGNIKTSEGSLSSALETTPGSLLSDLWLDRFPDPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSPEKVKGPRVVNIAAEEDQTAKISSSESKEL 195          
BLAST of CX047187 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 7.246e-60
Identity = 116/184 (63.04%), Postives = 143/184 (77.72%), Query Frame = 2
Query:    2 PMLLLAILACLVGSSNGSLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERDE-TMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIKGPRVVGIAGGEDETAKLQSE 550
            P LLL + A     +  SLL PF D P +LLSDLW++R  DPFRVLEQIP+ +E+ E ++ LS ARVDWKETPEGH IM+DVPG+K+D++KIEVEENRVLRVSG         GD WHRVERS+GKFWRQFKLP NVDLDSV+AK+ENGVLTL+L KLS D+IKGPR+V I   +D+ +K+ ++
Sbjct:   12 PFLLLILAADFPLKAKASLL-PFIDSPNTLLSDLWSDRFPDPFRVLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKLSHDKIKGPRMVSIVEEDDKPSKIVND 194          
BLAST of CX047187 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 4.268e-44
Identity = 91/183 (49.73%), Postives = 126/183 (68.85%), Query Frame = 2
Query:   17 AILACLV-----GSSNGSLLTPFADRPR--SLLSDLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXX----GDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIKGPRVVGI--AGGED 526
            A+LAC+       +++G+LL  F         + +L     ADPFR+LE +PF  +RD+   LS ARVDW+ET + H +++DVPG+++++L++EVE+NRVLR+SG             GD WHR ERS+G+FWRQ +LPDN DLDS+ A L+NGVLT+  +KL+PDQIKGPRVVGI  AGG+D
Sbjct:   11 AMLACIAVVLASTAADGALLPWFGGGGARDEAVPELGLLAAADPFRILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTVRFRKLAPDQIKGPRVVGIASAGGDD 193          
BLAST of CX047187 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.273e-29
Identity = 66/148 (44.59%), Postives = 97/148 (65.54%), Query Frame = 2
Query:   68 FADRPRSLLSDLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIKGPRVVGI 511
            F DR  S + D ++  + DPFR L   P      E+ A +  R+DWKETPE H   +D+PG+K++E+K+EVEE+RVL++SG          D+WHR+ERS GKF R+F+LP+N  +D V+A +ENGVLT+++ K   +++K P V  I
Sbjct:    8 FGDRRSSSMFDPFSIDVFDPFRELG-FP-STNSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK---EEVKKPEVKSI 150          
BLAST of CX047187 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.639e-29
Identity = 64/149 (42.95%), Postives = 96/149 (64.43%), Query Frame = 2
Query:   68 FADRPRSLLSDLWTERLADPFRVLEQIPFELERD-ETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIKGPRVVGI 511
            F DR  + + D ++  + DPF+   ++ F +    ET A +  R+DWKETPE H    D+PG+K++E+K+EVEE+RVL++SG          D WHRVERS GKF R+F+LP+N  +D V+A +ENGVLT+++ K   +++  P V  I
Sbjct:    8 FGDRRSTSVFDPFSIDVFDPFK---ELGFTVSNSGETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK---EEVNNPDVKSI 150          
BLAST of CX047187 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.287e-28
Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 2
Query:   68 FADRPRSLLSDLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIKGPRVVGI 511
            F DR  S + D ++  + DPFR L   P      ET A +  R+DWKETPE H    D+PG+K +E+K+EVEE+RVL++SG          D+W RVERS GKF R+F+LP+N  +D V+A +ENGVLT+++ K   +++K P V  I
Sbjct:    8 FGDRRSSSMFDPFSIDVFDPFRELG-FP-GTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK---EEMKKPDVKSI 150          
BLAST of CX047187 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.551e-28
Identity = 66/155 (42.58%), Postives = 98/155 (63.23%), Query Frame = 2
Query:   53 SLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIKGPRVVGIAG 517
            S++  F    RS + D ++    DPF+ +  I  E  R ET A+  AR+DWKETPE H +  D+PG+K++E+K+EVE+ RVL++SG          D WHRVERS GKF R+F+LP+N  +D V+A +ENGVLT+ + K   ++    + + I+G
Sbjct:    2 SIIPSFFTSKRSNIFDPFSLDTWDPFQGI--ISTEPAR-ETAAIVNARIDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKFIRRFRLPENAKMDEVKAMMENGVLTVVVPKEEEEKKPMVKAIDISG 153          
BLAST of CX047187 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.629e-27
Identity = 66/141 (46.81%), Postives = 89/141 (63.12%), Query Frame = 2
Query:   95 SDLWTERLADPFRVLEQIPFELE--RDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIKGPRVVGI 511
            +DLW    ADPF     I   +     ET A + ARVDWKETPE H   +D+PGVK++E+K+EVE+  VL VSG          D+WHRVERS GKF R+F+LP++  ++ V+A LENGVLT+++ K    ++K P V  I
Sbjct:   14 ADLW----ADPFDTFRSIVPAISGGSSETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKA---EVKKPEVKAI 147          
BLAST of CX047187 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.629e-27
Identity = 65/144 (45.14%), Postives = 91/144 (63.19%), Query Frame = 2
Query:   83 RSLLSDLWTERLADPF-RVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIKGPRVVGI 511
            RS + D ++  L DPF  V   +      ++T A + AR+DWKETPE H    D+PGVK++E+K+EVEE  VL +SG          D+WHRVERS G+F R+F+LP+N  +D V+A LENGVLT+++ K    ++K P V  I
Sbjct:    6 RSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKA---EVKKPEVKAI 146          
The following BLAST results are available for this feature:
BLAST of CX047187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HSP41_SOYBN4.849e-6466.8422.0 kDa class IV heat shock protein OS=Glycine ma... [more]
HSP22_ARATH6.333e-6465.0322.0 kDa heat shock protein OS=Arabidopsis thalian... [more]
HSP41_PEA7.246e-6063.0422.7 kDa class IV heat shock protein OS=Pisum sati... [more]
HS232_ORYSJ4.268e-4449.7323.2 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP11_SOLLC2.273e-2944.5917.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HSP12_SOLPE8.639e-2942.9517.6 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_SOLPE4.287e-2845.2717.7 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_HELAN9.551e-2842.5817.6 kDa class I heat shock protein OS=Helianthus ... [more]
HS16A_WHEAT1.629e-2746.8116.9 kDa class I heat shock protein 1 OS=Triticum ... [more]
HS16A_ORYSJ1.629e-2745.1416.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12F09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12F09-K17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047187 ID=CX047187; Name=CX047187; organism=Citrus sinensis; type=EST; length=804bp
GCCAATGCTGCTCTTGGCAATATTGGCATGTCTTGTGGGCTCATCAAATG
GCTCTCTGCTGACGCCCTTCGCTGATCGTCCGAGGAGTCTGTTATCCGAT
CTCTGGACAGAACGTTTGGCAGACCCCTTCCGGGTGCTAGAGCAAATCCC
ATTTGAGCTCGAGAGGGACGAGACCATGGCGCTATCTCCCGCTAGAGTGG
ACTGGAAAGAGACACCGGAGGGTCACTTCATAATGCTGGATGTACCGGGG
GTGAAGAGGGACGAGCTGAAGATTGAAGTTGAGGAGAATCGCGTGCTGCG
AGTGAGCGGAGAGAGGAAACGGGAGGAGGAGAAGAAGGGCGATCAGTGGC
ACAGAGTGGAGAGATCCCATGGCAAGTTTTGGAGGCAGTTCAAGCTGCCG
GACAATGTGGATTTAGATTCTGTACAGGCTAAGCTTGAAAATGGTGTGCT
CACTTTGTCCTTGAAGAAGCTGTCACCTGACCAGATCAAAGGTCCGAGAG
TTGTCGGCATTGCGGGCGGAGAGGACGAAACGGCCAAGCTGCAGAGCGAG
GCTAGGCAAGAGCTTTAGAGGTTTTTTGCCTGCCATTGGGTTTATGTCAG
TGTGGTGTGGAGAATAAGGGTGGTTTTACTGCAATGTTGAGCTAGCTTTG
TTTTTTACTTTTGTTTTGTCGTTGTCTTCGTTTGATGCAAAATCTGCTGT
CTTGTAATAAGTTTAATACTGTAAAATAATTTCTCTTGGTAACATTCTCT
CTGCACTATTAAAGTATAAATAACGAGGCAGCACATGAAGCTGATACAGC
TCTC
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